Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10505 and A4249_RS10510 are separated by 71 nucleotides A4249_RS10510 and A4249_RS10515 are separated by 145 nucleotides
A4249_RS10505: A4249_RS10505 - glutathionylspermidine synthase family protein, at 2,112,337 to 2,113,503
_RS10505
A4249_RS10510: A4249_RS10510 - hypothetical protein, at 2,113,575 to 2,114,453
_RS10510
A4249_RS10515: A4249_RS10515 - tRNA dihydrouridine(20/20a) synthase DusA, at 2,114,599 to 2,115,630
_RS10515
Position (kb)
2113
2114
2115 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2112.592 kb on + strand, within A4249_RS10505 at 2112.592 kb on + strand, within A4249_RS10505 at 2112.592 kb on + strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.593 kb on - strand, within A4249_RS10505 at 2112.631 kb on + strand, within A4249_RS10505 at 2112.631 kb on + strand, within A4249_RS10505 at 2112.632 kb on - strand, within A4249_RS10505 at 2112.632 kb on - strand, within A4249_RS10505 at 2112.632 kb on - strand, within A4249_RS10505 at 2112.632 kb on - strand, within A4249_RS10505 at 2112.632 kb on - strand, within A4249_RS10505 at 2112.652 kb on + strand, within A4249_RS10505 at 2112.652 kb on + strand, within A4249_RS10505 at 2112.652 kb on + strand, within A4249_RS10505 at 2112.652 kb on + strand, within A4249_RS10505 at 2112.653 kb on - strand, within A4249_RS10505 at 2112.679 kb on + strand, within A4249_RS10505 at 2112.679 kb on + strand, within A4249_RS10505 at 2112.679 kb on + strand, within A4249_RS10505 at 2112.679 kb on + strand, within A4249_RS10505 at 2112.680 kb on - strand, within A4249_RS10505 at 2112.680 kb on - strand, within A4249_RS10505 at 2112.680 kb on - strand, within A4249_RS10505 at 2112.685 kb on + strand, within A4249_RS10505 at 2112.685 kb on + strand, within A4249_RS10505 at 2112.685 kb on + strand, within A4249_RS10505 at 2112.685 kb on + strand, within A4249_RS10505 at 2112.685 kb on + strand, within A4249_RS10505 at 2112.685 kb on + strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.686 kb on - strand, within A4249_RS10505 at 2112.712 kb on + strand, within A4249_RS10505 at 2112.712 kb on + strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2112.713 kb on - strand, within A4249_RS10505 at 2113.034 kb on - strand, within A4249_RS10505 at 2113.034 kb on - strand, within A4249_RS10505 at 2113.034 kb on - strand, within A4249_RS10505 at 2113.063 kb on + strand, within A4249_RS10505 at 2113.063 kb on + strand, within A4249_RS10505 at 2113.064 kb on - strand, within A4249_RS10505 at 2113.064 kb on - strand, within A4249_RS10505 at 2113.139 kb on + strand, within A4249_RS10505 at 2113.139 kb on + strand, within A4249_RS10505 at 2113.139 kb on + strand, within A4249_RS10505 at 2113.139 kb on + strand, within A4249_RS10505 at 2113.139 kb on + strand, within A4249_RS10505 at 2113.139 kb on + strand, within A4249_RS10505 at 2113.140 kb on - strand, within A4249_RS10505 at 2113.140 kb on - strand, within A4249_RS10505 at 2113.140 kb on - strand, within A4249_RS10505 at 2113.181 kb on + strand, within A4249_RS10505 at 2113.181 kb on + strand, within A4249_RS10505 at 2113.181 kb on + strand, within A4249_RS10505 at 2113.182 kb on - strand, within A4249_RS10505 at 2113.182 kb on - strand, within A4249_RS10505 at 2113.192 kb on + strand, within A4249_RS10505 at 2113.193 kb on - strand, within A4249_RS10505 at 2113.234 kb on + strand, within A4249_RS10505 at 2113.234 kb on + strand, within A4249_RS10505 at 2113.234 kb on + strand, within A4249_RS10505 at 2113.234 kb on + strand, within A4249_RS10505 at 2113.234 kb on + strand, within A4249_RS10505 at 2113.234 kb on + strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.235 kb on - strand, within A4249_RS10505 at 2113.447 kb on - strand at 2113.653 kb on + strand at 2113.653 kb on + strand at 2113.653 kb on + strand at 2113.654 kb on - strand at 2113.857 kb on + strand, within A4249_RS10510 at 2113.858 kb on - strand, within A4249_RS10510 at 2113.887 kb on + strand, within A4249_RS10510 at 2113.888 kb on - strand, within A4249_RS10510 at 2113.888 kb on - strand, within A4249_RS10510 at 2113.938 kb on + strand, within A4249_RS10510 at 2114.094 kb on + strand, within A4249_RS10510 at 2114.095 kb on - strand, within A4249_RS10510 at 2114.095 kb on - strand, within A4249_RS10510 at 2114.124 kb on + strand, within A4249_RS10510 at 2114.125 kb on - strand, within A4249_RS10510 at 2114.370 kb on + strand at 2114.371 kb on - strand at 2114.406 kb on + strand at 2114.451 kb on + strand at 2114.452 kb on - strand at 2114.502 kb on + strand at 2114.551 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.598 kb on + strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.599 kb on - strand at 2114.659 kb on + strand at 2114.659 kb on + strand at 2114.659 kb on + strand at 2114.704 kb on + strand, within A4249_RS10515 at 2114.704 kb on + strand, within A4249_RS10515 at 2114.704 kb on + strand, within A4249_RS10515 at 2114.704 kb on + strand, within A4249_RS10515 at 2114.705 kb on - strand, within A4249_RS10515 at 2114.705 kb on - strand, within A4249_RS10515 at 2114.705 kb on - strand, within A4249_RS10515 at 2114.705 kb on - strand, within A4249_RS10515 at 2114.705 kb on - strand, within A4249_RS10515 at 2114.857 kb on + strand, within A4249_RS10515 at 2114.858 kb on - strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.958 kb on + strand, within A4249_RS10515 at 2114.959 kb on - strand, within A4249_RS10515 at 2114.959 kb on - strand, within A4249_RS10515 at 2114.959 kb on - strand, within A4249_RS10515 at 2114.959 kb on - strand, within A4249_RS10515 at 2115.163 kb on + strand, within A4249_RS10515 at 2115.163 kb on + strand, within A4249_RS10515 at 2115.163 kb on + strand, within A4249_RS10515 at 2115.163 kb on + strand, within A4249_RS10515 at 2115.163 kb on + strand, within A4249_RS10515 at 2115.163 kb on + strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.164 kb on - strand, within A4249_RS10515 at 2115.310 kb on + strand, within A4249_RS10515 at 2115.311 kb on - strand, within A4249_RS10515 at 2115.409 kb on + strand, within A4249_RS10515 at 2115.410 kb on - strand, within A4249_RS10515 at 2115.410 kb on - strand, within A4249_RS10515 at 2115.410 kb on - strand, within A4249_RS10515 at 2115.410 kb on - strand, within A4249_RS10515 at 2115.410 kb on - strand, within A4249_RS10515 at 2115.410 kb on - strand, within A4249_RS10515 at 2115.411 kb on + strand, within A4249_RS10515 at 2115.412 kb on - strand, within A4249_RS10515
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,112,592 + A4249_RS10505 0.22 +0.3 2,112,592 + A4249_RS10505 0.22 +0.9 2,112,592 + A4249_RS10505 0.22 +0.4 2,112,593 - A4249_RS10505 0.22 -0.5 2,112,593 - A4249_RS10505 0.22 +0.2 2,112,593 - A4249_RS10505 0.22 -0.8 2,112,593 - A4249_RS10505 0.22 -1.1 2,112,593 - A4249_RS10505 0.22 -0.4 2,112,593 - A4249_RS10505 0.22 +0.1 2,112,593 - A4249_RS10505 0.22 -0.9 2,112,631 + A4249_RS10505 0.25 +0.7 2,112,631 + A4249_RS10505 0.25 +0.6 2,112,632 - A4249_RS10505 0.25 +0.7 2,112,632 - A4249_RS10505 0.25 -0.9 2,112,632 - A4249_RS10505 0.25 +0.8 2,112,632 - A4249_RS10505 0.25 +0.3 2,112,632 - A4249_RS10505 0.25 -0.6 2,112,652 + A4249_RS10505 0.27 -0.8 2,112,652 + A4249_RS10505 0.27 -0.5 2,112,652 + A4249_RS10505 0.27 -0.6 2,112,652 + A4249_RS10505 0.27 -0.2 2,112,653 - A4249_RS10505 0.27 -1.0 2,112,679 + A4249_RS10505 0.29 +0.5 2,112,679 + A4249_RS10505 0.29 +1.5 2,112,679 + A4249_RS10505 0.29 +0.0 2,112,679 + A4249_RS10505 0.29 -1.0 2,112,680 - A4249_RS10505 0.29 -0.3 2,112,680 - A4249_RS10505 0.29 +0.6 2,112,680 - A4249_RS10505 0.29 -2.4 2,112,685 + A4249_RS10505 0.30 +0.8 2,112,685 + A4249_RS10505 0.30 +1.7 2,112,685 + A4249_RS10505 0.30 +0.1 2,112,685 + A4249_RS10505 0.30 -2.0 2,112,685 + A4249_RS10505 0.30 +0.6 2,112,685 + A4249_RS10505 0.30 -0.6 2,112,686 - A4249_RS10505 0.30 +0.2 2,112,686 - A4249_RS10505 0.30 -0.3 2,112,686 - A4249_RS10505 0.30 -0.7 2,112,686 - A4249_RS10505 0.30 -1.1 2,112,686 - A4249_RS10505 0.30 +0.0 2,112,686 - A4249_RS10505 0.30 -0.0 2,112,686 - A4249_RS10505 0.30 -0.4 2,112,686 - A4249_RS10505 0.30 -0.1 2,112,686 - A4249_RS10505 0.30 +0.7 2,112,712 + A4249_RS10505 0.32 -0.6 2,112,712 + A4249_RS10505 0.32 +1.4 2,112,713 - A4249_RS10505 0.32 +0.3 2,112,713 - A4249_RS10505 0.32 -0.9 2,112,713 - A4249_RS10505 0.32 +0.2 2,112,713 - A4249_RS10505 0.32 -1.4 2,112,713 - A4249_RS10505 0.32 -0.2 2,112,713 - A4249_RS10505 0.32 +0.8 2,112,713 - A4249_RS10505 0.32 -0.2 2,113,034 - A4249_RS10505 0.60 +0.9 2,113,034 - A4249_RS10505 0.60 +0.1 2,113,034 - A4249_RS10505 0.60 -2.0 2,113,063 + A4249_RS10505 0.62 +1.1 2,113,063 + A4249_RS10505 0.62 -0.4 2,113,064 - A4249_RS10505 0.62 +0.4 2,113,064 - A4249_RS10505 0.62 +0.7 2,113,139 + A4249_RS10505 0.69 -0.3 2,113,139 + A4249_RS10505 0.69 +2.4 2,113,139 + A4249_RS10505 0.69 +0.5 2,113,139 + A4249_RS10505 0.69 -0.7 2,113,139 + A4249_RS10505 0.69 -0.5 2,113,139 + A4249_RS10505 0.69 +0.6 2,113,140 - A4249_RS10505 0.69 -0.1 2,113,140 - A4249_RS10505 0.69 -0.7 2,113,140 - A4249_RS10505 0.69 -0.2 2,113,181 + A4249_RS10505 0.72 +0.7 2,113,181 + A4249_RS10505 0.72 +0.5 2,113,181 + A4249_RS10505 0.72 -0.0 2,113,182 - A4249_RS10505 0.72 -0.7 2,113,182 - A4249_RS10505 0.72 -1.1 2,113,192 + A4249_RS10505 0.73 +0.5 2,113,193 - A4249_RS10505 0.73 -1.5 2,113,234 + A4249_RS10505 0.77 +0.3 2,113,234 + A4249_RS10505 0.77 +0.3 2,113,234 + A4249_RS10505 0.77 -0.4 2,113,234 + A4249_RS10505 0.77 -0.4 2,113,234 + A4249_RS10505 0.77 -0.4 2,113,234 + A4249_RS10505 0.77 -0.4 2,113,235 - A4249_RS10505 0.77 +0.3 2,113,235 - A4249_RS10505 0.77 -0.3 2,113,235 - A4249_RS10505 0.77 -0.7 2,113,235 - A4249_RS10505 0.77 +0.5 2,113,235 - A4249_RS10505 0.77 -0.3 2,113,235 - A4249_RS10505 0.77 +1.2 2,113,235 - A4249_RS10505 0.77 -0.2 2,113,235 - A4249_RS10505 0.77 -2.2 2,113,235 - A4249_RS10505 0.77 -1.0 2,113,235 - A4249_RS10505 0.77 +0.6 2,113,235 - A4249_RS10505 0.77 +0.3 2,113,235 - A4249_RS10505 0.77 -0.0 2,113,235 - A4249_RS10505 0.77 +0.1 2,113,447 - -0.8 2,113,653 + -0.5 2,113,653 + -0.8 2,113,653 + +0.5 2,113,654 - +0.2 2,113,857 + A4249_RS10510 0.32 -1.0 2,113,858 - A4249_RS10510 0.32 +0.1 2,113,887 + A4249_RS10510 0.35 -0.7 2,113,888 - A4249_RS10510 0.36 -0.3 2,113,888 - A4249_RS10510 0.36 -0.2 2,113,938 + A4249_RS10510 0.41 +1.0 2,114,094 + A4249_RS10510 0.59 -0.2 2,114,095 - A4249_RS10510 0.59 +0.1 2,114,095 - A4249_RS10510 0.59 -0.6 2,114,124 + A4249_RS10510 0.62 -0.1 2,114,125 - A4249_RS10510 0.63 +0.1 2,114,370 + -0.3 2,114,371 - -0.3 2,114,406 + -1.7 2,114,451 + +1.0 2,114,452 - +0.1 2,114,502 + -0.4 2,114,551 + -0.2 2,114,598 + +0.8 2,114,598 + -0.1 2,114,598 + +0.7 2,114,598 + +0.0 2,114,598 + +0.1 2,114,598 + -0.2 2,114,598 + -0.8 2,114,598 + -0.6 2,114,599 - +0.2 2,114,599 - -1.0 2,114,599 - +0.4 2,114,599 - -0.5 2,114,599 - -0.0 2,114,599 - -2.6 2,114,599 - -0.3 2,114,599 - +0.0 2,114,599 - +0.1 2,114,599 - +0.3 2,114,599 - -1.7 2,114,599 - -1.7 2,114,599 - -0.9 2,114,599 - -0.1 2,114,659 + -0.5 2,114,659 + -0.5 2,114,659 + +0.0 2,114,704 + A4249_RS10515 0.10 -2.2 2,114,704 + A4249_RS10515 0.10 -0.3 2,114,704 + A4249_RS10515 0.10 -0.6 2,114,704 + A4249_RS10515 0.10 +0.7 2,114,705 - A4249_RS10515 0.10 +0.9 2,114,705 - A4249_RS10515 0.10 -0.4 2,114,705 - A4249_RS10515 0.10 -2.3 2,114,705 - A4249_RS10515 0.10 +2.1 2,114,705 - A4249_RS10515 0.10 +0.3 2,114,857 + A4249_RS10515 0.25 -0.2 2,114,858 - A4249_RS10515 0.25 -0.4 2,114,958 + A4249_RS10515 0.35 -1.6 2,114,958 + A4249_RS10515 0.35 -0.1 2,114,958 + A4249_RS10515 0.35 -1.6 2,114,958 + A4249_RS10515 0.35 +0.6 2,114,958 + A4249_RS10515 0.35 -0.3 2,114,958 + A4249_RS10515 0.35 +0.6 2,114,958 + A4249_RS10515 0.35 +0.2 2,114,958 + A4249_RS10515 0.35 -0.2 2,114,959 - A4249_RS10515 0.35 +0.6 2,114,959 - A4249_RS10515 0.35 +1.2 2,114,959 - A4249_RS10515 0.35 +0.9 2,114,959 - A4249_RS10515 0.35 -0.6 2,115,163 + A4249_RS10515 0.55 -0.3 2,115,163 + A4249_RS10515 0.55 -0.0 2,115,163 + A4249_RS10515 0.55 -0.6 2,115,163 + A4249_RS10515 0.55 -2.5 2,115,163 + A4249_RS10515 0.55 +0.9 2,115,163 + A4249_RS10515 0.55 +1.2 2,115,164 - A4249_RS10515 0.55 +0.3 2,115,164 - A4249_RS10515 0.55 -0.3 2,115,164 - A4249_RS10515 0.55 +0.5 2,115,164 - A4249_RS10515 0.55 -1.4 2,115,164 - A4249_RS10515 0.55 +0.1 2,115,164 - A4249_RS10515 0.55 -0.3 2,115,164 - A4249_RS10515 0.55 +0.9 2,115,164 - A4249_RS10515 0.55 +0.1 2,115,310 + A4249_RS10515 0.69 +0.2 2,115,311 - A4249_RS10515 0.69 +0.1 2,115,409 + A4249_RS10515 0.78 +1.0 2,115,410 - A4249_RS10515 0.79 -2.2 2,115,410 - A4249_RS10515 0.79 -0.8 2,115,410 - A4249_RS10515 0.79 -1.2 2,115,410 - A4249_RS10515 0.79 -1.5 2,115,410 - A4249_RS10515 0.79 +0.5 2,115,410 - A4249_RS10515 0.79 -0.0 2,115,411 + A4249_RS10515 0.79 -0.1 2,115,412 - A4249_RS10515 0.79 -0.6
Or see this region's nucleotide sequence