Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10470

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10460 and A4249_RS10465 are separated by 197 nucleotidesA4249_RS10465 and A4249_RS10470 are separated by 82 nucleotidesA4249_RS10470 and A4249_RS16950 are separated by 47 nucleotides A4249_RS10460: A4249_RS10460 - ATP-binding protein, at 2,103,451 to 2,105,835 _RS10460 A4249_RS10465: A4249_RS10465 - hypothetical protein, at 2,106,033 to 2,106,533 _RS10465 A4249_RS10470: A4249_RS10470 - acetyl-CoA C-acyltransferase, at 2,106,616 to 2,107,812 _RS10470 A4249_RS16950: A4249_RS16950 - flavin reductase family protein, at 2,107,860 to 2,108,882 _RS16950 Position (kb) 2106 2107 2108Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2105.687 kb on + strandat 2105.687 kb on + strandat 2105.688 kb on - strandat 2105.688 kb on - strandat 2105.688 kb on - strandat 2105.833 kb on + strandat 2105.846 kb on + strandat 2105.846 kb on + strandat 2105.846 kb on + strandat 2105.846 kb on + strandat 2105.846 kb on + strandat 2105.846 kb on + strandat 2105.846 kb on + strandat 2105.847 kb on - strandat 2105.847 kb on - strandat 2105.847 kb on - strandat 2105.847 kb on - strandat 2105.847 kb on - strandat 2105.848 kb on + strandat 2105.848 kb on + strandat 2105.848 kb on + strandat 2105.848 kb on + strandat 2105.848 kb on + strandat 2105.848 kb on + strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.849 kb on - strandat 2105.904 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2105.958 kb on - strandat 2106.058 kb on - strandat 2106.123 kb on + strand, within A4249_RS10465at 2106.123 kb on + strand, within A4249_RS10465at 2106.123 kb on + strand, within A4249_RS10465at 2106.123 kb on + strand, within A4249_RS10465at 2106.123 kb on + strand, within A4249_RS10465at 2106.123 kb on + strand, within A4249_RS10465at 2106.124 kb on - strand, within A4249_RS10465at 2106.124 kb on - strand, within A4249_RS10465at 2106.124 kb on - strand, within A4249_RS10465at 2106.147 kb on + strand, within A4249_RS10465at 2106.147 kb on + strand, within A4249_RS10465at 2106.148 kb on - strand, within A4249_RS10465at 2106.148 kb on - strand, within A4249_RS10465at 2106.148 kb on - strand, within A4249_RS10465at 2106.148 kb on - strand, within A4249_RS10465at 2106.149 kb on + strand, within A4249_RS10465at 2106.149 kb on + strand, within A4249_RS10465at 2106.149 kb on + strand, within A4249_RS10465at 2106.149 kb on + strand, within A4249_RS10465at 2106.149 kb on + strand, within A4249_RS10465at 2106.150 kb on - strand, within A4249_RS10465at 2106.150 kb on - strand, within A4249_RS10465at 2106.150 kb on - strand, within A4249_RS10465at 2106.150 kb on - strand, within A4249_RS10465at 2106.296 kb on - strand, within A4249_RS10465at 2106.296 kb on - strand, within A4249_RS10465at 2106.296 kb on - strand, within A4249_RS10465at 2106.340 kb on + strand, within A4249_RS10465at 2106.340 kb on + strand, within A4249_RS10465at 2106.340 kb on + strand, within A4249_RS10465at 2106.340 kb on + strand, within A4249_RS10465at 2106.340 kb on + strand, within A4249_RS10465at 2106.340 kb on + strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.341 kb on - strand, within A4249_RS10465at 2106.381 kb on + strand, within A4249_RS10465at 2106.381 kb on + strand, within A4249_RS10465at 2106.381 kb on + strand, within A4249_RS10465at 2106.381 kb on + strand, within A4249_RS10465at 2106.381 kb on + strand, within A4249_RS10465at 2106.382 kb on - strand, within A4249_RS10465at 2106.531 kb on + strandat 2106.532 kb on - strandat 2106.532 kb on - strandat 2106.532 kb on - strandat 2106.555 kb on + strandat 2106.555 kb on + strandat 2106.555 kb on + strandat 2106.556 kb on - strandat 2106.556 kb on - strandat 2106.556 kb on - strandat 2106.556 kb on - strandat 2106.556 kb on - strandat 2106.556 kb on - strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.559 kb on + strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.560 kb on - strandat 2106.564 kb on + strandat 2106.564 kb on + strandat 2106.564 kb on + strandat 2106.565 kb on - strandat 2106.565 kb on - strandat 2106.618 kb on - strandat 2106.618 kb on - strandat 2106.618 kb on - strandat 2106.618 kb on - strandat 2107.260 kb on - strand, within A4249_RS10470at 2107.260 kb on - strand, within A4249_RS10470at 2107.260 kb on - strand, within A4249_RS10470at 2107.289 kb on + strand, within A4249_RS10470at 2107.289 kb on + strand, within A4249_RS10470at 2107.289 kb on + strand, within A4249_RS10470at 2107.289 kb on + strand, within A4249_RS10470at 2107.290 kb on - strand, within A4249_RS10470at 2107.290 kb on - strand, within A4249_RS10470at 2107.340 kb on + strand, within A4249_RS10470at 2107.340 kb on + strand, within A4249_RS10470at 2107.340 kb on + strand, within A4249_RS10470at 2107.340 kb on + strand, within A4249_RS10470at 2107.341 kb on - strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.364 kb on + strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.365 kb on - strand, within A4249_RS10470at 2107.427 kb on + strand, within A4249_RS10470at 2107.427 kb on + strand, within A4249_RS10470at 2107.428 kb on - strand, within A4249_RS10470at 2107.769 kb on + strandat 2107.769 kb on + strandat 2107.769 kb on + strandat 2107.769 kb on + strandat 2107.769 kb on + strandat 2107.828 kb on + strandat 2107.828 kb on + strandat 2107.828 kb on + strandat 2107.829 kb on - strandat 2107.829 kb on - strandat 2107.844 kb on + strandat 2107.844 kb on + strandat 2107.844 kb on + strandat 2107.844 kb on + strandat 2107.844 kb on + strandat 2107.844 kb on + strandat 2107.844 kb on + strandat 2107.845 kb on - strandat 2107.845 kb on - strandat 2107.845 kb on - strandat 2107.845 kb on - strandat 2107.882 kb on + strandat 2107.883 kb on - strandat 2107.883 kb on - strandat 2107.897 kb on + strandat 2107.897 kb on + strandat 2107.898 kb on - strandat 2108.347 kb on + strand, within A4249_RS16950at 2108.347 kb on + strand, within A4249_RS16950at 2108.348 kb on - strand, within A4249_RS16950at 2108.348 kb on - strand, within A4249_RS16950at 2108.348 kb on - strand, within A4249_RS16950at 2108.657 kb on + strand, within A4249_RS16950at 2108.805 kb on + strandat 2108.806 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,105,687 + +0.3
2,105,687 + -0.2
2,105,688 - +0.9
2,105,688 - -0.2
2,105,688 - +0.1
2,105,833 + -0.3
2,105,846 + +0.2
2,105,846 + -0.1
2,105,846 + -0.6
2,105,846 + +0.7
2,105,846 + -1.2
2,105,846 + -0.7
2,105,846 + -0.1
2,105,847 - +0.2
2,105,847 - +0.1
2,105,847 - -0.0
2,105,847 - -0.9
2,105,847 - +0.5
2,105,848 + -2.1
2,105,848 + -0.2
2,105,848 + +0.2
2,105,848 + -0.4
2,105,848 + +0.3
2,105,848 + +0.6
2,105,849 - +0.5
2,105,849 - -0.4
2,105,849 - -0.9
2,105,849 - -0.1
2,105,849 - +0.9
2,105,849 - -0.3
2,105,849 - -2.0
2,105,849 - +0.3
2,105,849 - +0.4
2,105,849 - -0.8
2,105,849 - +0.2
2,105,849 - -0.2
2,105,904 - +1.3
2,105,958 - -0.5
2,105,958 - -0.1
2,105,958 - +0.2
2,105,958 - +0.7
2,105,958 - +0.1
2,105,958 - +0.9
2,105,958 - +0.8
2,105,958 - -0.4
2,106,058 - +0.0
2,106,123 + A4249_RS10465 0.18 +0.2
2,106,123 + A4249_RS10465 0.18 +1.8
2,106,123 + A4249_RS10465 0.18 -0.9
2,106,123 + A4249_RS10465 0.18 -0.1
2,106,123 + A4249_RS10465 0.18 +1.0
2,106,123 + A4249_RS10465 0.18 -0.4
2,106,124 - A4249_RS10465 0.18 -1.3
2,106,124 - A4249_RS10465 0.18 -1.2
2,106,124 - A4249_RS10465 0.18 -1.8
2,106,147 + A4249_RS10465 0.23 -0.4
2,106,147 + A4249_RS10465 0.23 -0.7
2,106,148 - A4249_RS10465 0.23 -0.2
2,106,148 - A4249_RS10465 0.23 +1.5
2,106,148 - A4249_RS10465 0.23 -0.3
2,106,148 - A4249_RS10465 0.23 -1.2
2,106,149 + A4249_RS10465 0.23 -0.1
2,106,149 + A4249_RS10465 0.23 +0.3
2,106,149 + A4249_RS10465 0.23 -0.8
2,106,149 + A4249_RS10465 0.23 +0.1
2,106,149 + A4249_RS10465 0.23 +0.2
2,106,150 - A4249_RS10465 0.23 -0.3
2,106,150 - A4249_RS10465 0.23 +0.4
2,106,150 - A4249_RS10465 0.23 -1.9
2,106,150 - A4249_RS10465 0.23 +0.8
2,106,296 - A4249_RS10465 0.52 -1.7
2,106,296 - A4249_RS10465 0.52 -1.4
2,106,296 - A4249_RS10465 0.52 -0.1
2,106,340 + A4249_RS10465 0.61 +0.4
2,106,340 + A4249_RS10465 0.61 +0.9
2,106,340 + A4249_RS10465 0.61 -0.3
2,106,340 + A4249_RS10465 0.61 +0.1
2,106,340 + A4249_RS10465 0.61 +1.0
2,106,340 + A4249_RS10465 0.61 -1.6
2,106,341 - A4249_RS10465 0.61 +1.3
2,106,341 - A4249_RS10465 0.61 -0.2
2,106,341 - A4249_RS10465 0.61 +0.1
2,106,341 - A4249_RS10465 0.61 +0.1
2,106,341 - A4249_RS10465 0.61 +0.8
2,106,341 - A4249_RS10465 0.61 +0.2
2,106,341 - A4249_RS10465 0.61 +0.0
2,106,381 + A4249_RS10465 0.69 -0.4
2,106,381 + A4249_RS10465 0.69 +1.0
2,106,381 + A4249_RS10465 0.69 -0.4
2,106,381 + A4249_RS10465 0.69 -1.0
2,106,381 + A4249_RS10465 0.69 +0.1
2,106,382 - A4249_RS10465 0.70 +1.8
2,106,531 + +0.6
2,106,532 - -0.1
2,106,532 - -0.2
2,106,532 - -0.3
2,106,555 + -2.8
2,106,555 + -0.1
2,106,555 + -1.1
2,106,556 - -1.1
2,106,556 - +0.4
2,106,556 - +0.8
2,106,556 - -0.9
2,106,556 - +0.0
2,106,556 - -0.1
2,106,559 + -0.1
2,106,559 + +1.4
2,106,559 + -0.0
2,106,559 + +0.6
2,106,559 + -0.2
2,106,559 + +2.1
2,106,559 + -0.2
2,106,559 + -0.2
2,106,559 + +0.3
2,106,559 + -0.1
2,106,559 + +0.6
2,106,559 + -0.1
2,106,560 - +0.5
2,106,560 - +0.4
2,106,560 - -0.3
2,106,560 - -0.4
2,106,560 - +1.2
2,106,560 - +1.1
2,106,560 - -1.4
2,106,560 - +1.3
2,106,560 - -0.1
2,106,560 - +1.6
2,106,560 - +0.4
2,106,560 - -0.4
2,106,560 - -0.1
2,106,564 + +0.7
2,106,564 + +0.3
2,106,564 + -0.2
2,106,565 - +0.3
2,106,565 - +1.1
2,106,618 - -0.7
2,106,618 - +0.7
2,106,618 - -0.7
2,106,618 - -1.5
2,107,260 - A4249_RS10470 0.54 +0.1
2,107,260 - A4249_RS10470 0.54 +0.2
2,107,260 - A4249_RS10470 0.54 -0.6
2,107,289 + A4249_RS10470 0.56 -0.2
2,107,289 + A4249_RS10470 0.56 -0.4
2,107,289 + A4249_RS10470 0.56 -0.2
2,107,289 + A4249_RS10470 0.56 +0.3
2,107,290 - A4249_RS10470 0.56 +0.3
2,107,290 - A4249_RS10470 0.56 -0.1
2,107,340 + A4249_RS10470 0.60 +0.1
2,107,340 + A4249_RS10470 0.60 -0.3
2,107,340 + A4249_RS10470 0.60 -0.6
2,107,340 + A4249_RS10470 0.60 -0.8
2,107,341 - A4249_RS10470 0.61 +1.2
2,107,364 + A4249_RS10470 0.62 +0.2
2,107,364 + A4249_RS10470 0.62 +1.2
2,107,364 + A4249_RS10470 0.62 +0.5
2,107,364 + A4249_RS10470 0.62 -1.4
2,107,364 + A4249_RS10470 0.62 -1.1
2,107,364 + A4249_RS10470 0.62 -0.3
2,107,364 + A4249_RS10470 0.62 +0.5
2,107,365 - A4249_RS10470 0.63 -0.3
2,107,365 - A4249_RS10470 0.63 -0.5
2,107,365 - A4249_RS10470 0.63 -1.4
2,107,365 - A4249_RS10470 0.63 -0.2
2,107,365 - A4249_RS10470 0.63 -0.6
2,107,365 - A4249_RS10470 0.63 +0.0
2,107,365 - A4249_RS10470 0.63 -0.4
2,107,365 - A4249_RS10470 0.63 +0.4
2,107,365 - A4249_RS10470 0.63 +1.3
2,107,427 + A4249_RS10470 0.68 -0.8
2,107,427 + A4249_RS10470 0.68 -1.4
2,107,428 - A4249_RS10470 0.68 -0.7
2,107,769 + -0.1
2,107,769 + +0.2
2,107,769 + +0.2
2,107,769 + -0.5
2,107,769 + -0.7
2,107,828 + +0.6
2,107,828 + +1.0
2,107,828 + +0.3
2,107,829 - +0.4
2,107,829 - +0.2
2,107,844 + -0.4
2,107,844 + +0.2
2,107,844 + -1.1
2,107,844 + +0.0
2,107,844 + -0.9
2,107,844 + -0.9
2,107,844 + -1.1
2,107,845 - -0.8
2,107,845 - -0.5
2,107,845 - -0.5
2,107,845 - -1.2
2,107,882 + -0.7
2,107,883 - -0.3
2,107,883 - -0.3
2,107,897 + +0.6
2,107,897 + -0.2
2,107,898 - +0.9
2,108,347 + A4249_RS16950 0.48 -0.1
2,108,347 + A4249_RS16950 0.48 +1.1
2,108,348 - A4249_RS16950 0.48 +0.9
2,108,348 - A4249_RS16950 0.48 +0.1
2,108,348 - A4249_RS16950 0.48 +0.2
2,108,657 + A4249_RS16950 0.78 +1.3
2,108,805 + -0.1
2,108,806 - +0.2

Or see this region's nucleotide sequence