Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08380

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08375 and A4249_RS08380 are separated by 106 nucleotidesA4249_RS08380 and A4249_RS08385 overlap by 4 nucleotides A4249_RS08375: A4249_RS08375 - hypothetical protein, at 1,680,697 to 1,681,593 _RS08375 A4249_RS08380: A4249_RS08380 - RidA family protein, at 1,681,700 to 1,682,158 _RS08380 A4249_RS08385: A4249_RS08385 - GNAT family N-acetyltransferase, at 1,682,155 to 1,683,301 _RS08385 Position (kb) 1681 1682 1683Strain fitness (log2 ratio) -2 -1 0 1at 1680.774 kb on - strandat 1680.936 kb on - strand, within A4249_RS08375at 1680.936 kb on - strand, within A4249_RS08375at 1681.057 kb on - strand, within A4249_RS08375at 1681.256 kb on + strand, within A4249_RS08375at 1681.257 kb on - strand, within A4249_RS08375at 1681.257 kb on - strand, within A4249_RS08375at 1681.310 kb on + strand, within A4249_RS08375at 1681.311 kb on - strand, within A4249_RS08375at 1681.587 kb on + strandat 1681.587 kb on + strandat 1681.588 kb on - strandat 1681.629 kb on + strandat 1681.629 kb on + strandat 1681.630 kb on - strandat 1681.630 kb on - strandat 1681.684 kb on + strandat 1681.685 kb on - strandat 1681.769 kb on + strand, within A4249_RS08380at 1681.769 kb on + strand, within A4249_RS08380at 1681.769 kb on + strand, within A4249_RS08380at 1681.769 kb on + strand, within A4249_RS08380at 1681.769 kb on + strand, within A4249_RS08380at 1681.769 kb on + strand, within A4249_RS08380at 1681.769 kb on + strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.770 kb on - strand, within A4249_RS08380at 1681.778 kb on + strand, within A4249_RS08380at 1681.778 kb on + strand, within A4249_RS08380at 1681.779 kb on - strand, within A4249_RS08380at 1681.779 kb on - strand, within A4249_RS08380at 1682.103 kb on - strand, within A4249_RS08380at 1682.245 kb on - strandat 1682.245 kb on - strandat 1682.348 kb on + strand, within A4249_RS08385at 1682.368 kb on + strand, within A4249_RS08385at 1682.369 kb on - strand, within A4249_RS08385at 1682.369 kb on - strand, within A4249_RS08385at 1682.369 kb on - strand, within A4249_RS08385at 1682.369 kb on - strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.395 kb on + strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.396 kb on - strand, within A4249_RS08385at 1682.425 kb on + strand, within A4249_RS08385at 1682.425 kb on + strand, within A4249_RS08385at 1682.426 kb on - strand, within A4249_RS08385at 1682.426 kb on - strand, within A4249_RS08385at 1682.426 kb on - strand, within A4249_RS08385at 1682.426 kb on - strand, within A4249_RS08385at 1682.426 kb on - strand, within A4249_RS08385at 1682.426 kb on - strand, within A4249_RS08385at 1682.446 kb on + strand, within A4249_RS08385at 1682.446 kb on + strand, within A4249_RS08385at 1682.446 kb on + strand, within A4249_RS08385at 1682.447 kb on - strand, within A4249_RS08385at 1682.449 kb on + strand, within A4249_RS08385at 1682.449 kb on + strand, within A4249_RS08385at 1682.450 kb on - strand, within A4249_RS08385at 1682.450 kb on - strand, within A4249_RS08385at 1682.450 kb on - strand, within A4249_RS08385at 1682.450 kb on - strand, within A4249_RS08385at 1682.846 kb on + strand, within A4249_RS08385at 1682.846 kb on + strand, within A4249_RS08385at 1682.846 kb on + strand, within A4249_RS08385at 1682.846 kb on + strand, within A4249_RS08385at 1682.846 kb on + strand, within A4249_RS08385at 1682.846 kb on + strand, within A4249_RS08385at 1682.847 kb on - strand, within A4249_RS08385at 1682.847 kb on - strand, within A4249_RS08385at 1682.847 kb on - strand, within A4249_RS08385at 1682.847 kb on - strand, within A4249_RS08385at 1682.847 kb on - strand, within A4249_RS08385at 1682.847 kb on - strand, within A4249_RS08385at 1682.882 kb on + strand, within A4249_RS08385at 1682.883 kb on - strand, within A4249_RS08385at 1682.883 kb on - strand, within A4249_RS08385at 1683.008 kb on + strand, within A4249_RS08385at 1683.008 kb on + strand, within A4249_RS08385at 1683.066 kb on - strand, within A4249_RS08385at 1683.066 kb on - strand, within A4249_RS08385at 1683.069 kb on - strand, within A4249_RS08385at 1683.069 kb on - strand, within A4249_RS08385at 1683.153 kb on - strand, within A4249_RS08385

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,680,774 - -2.0
1,680,936 - A4249_RS08375 0.27 +0.4
1,680,936 - A4249_RS08375 0.27 +0.1
1,681,057 - A4249_RS08375 0.40 +0.7
1,681,256 + A4249_RS08375 0.62 +0.4
1,681,257 - A4249_RS08375 0.62 +1.1
1,681,257 - A4249_RS08375 0.62 -2.4
1,681,310 + A4249_RS08375 0.68 +0.4
1,681,311 - A4249_RS08375 0.68 -0.1
1,681,587 + +1.3
1,681,587 + -1.0
1,681,588 - +0.4
1,681,629 + -0.7
1,681,629 + -0.8
1,681,630 - -0.3
1,681,630 - +0.0
1,681,684 + -1.5
1,681,685 - -0.6
1,681,769 + A4249_RS08380 0.15 -0.5
1,681,769 + A4249_RS08380 0.15 -0.2
1,681,769 + A4249_RS08380 0.15 +1.1
1,681,769 + A4249_RS08380 0.15 +0.1
1,681,769 + A4249_RS08380 0.15 +1.1
1,681,769 + A4249_RS08380 0.15 +0.5
1,681,769 + A4249_RS08380 0.15 -0.9
1,681,770 - A4249_RS08380 0.15 +0.7
1,681,770 - A4249_RS08380 0.15 +0.4
1,681,770 - A4249_RS08380 0.15 +0.9
1,681,770 - A4249_RS08380 0.15 +0.9
1,681,770 - A4249_RS08380 0.15 +1.4
1,681,770 - A4249_RS08380 0.15 +1.0
1,681,770 - A4249_RS08380 0.15 +1.7
1,681,778 + A4249_RS08380 0.17 +0.1
1,681,778 + A4249_RS08380 0.17 +0.8
1,681,779 - A4249_RS08380 0.17 +0.8
1,681,779 - A4249_RS08380 0.17 +0.1
1,682,103 - A4249_RS08380 0.88 +1.5
1,682,245 - -0.7
1,682,245 - -0.2
1,682,348 + A4249_RS08385 0.17 +0.4
1,682,368 + A4249_RS08385 0.19 +0.1
1,682,369 - A4249_RS08385 0.19 -0.1
1,682,369 - A4249_RS08385 0.19 -0.8
1,682,369 - A4249_RS08385 0.19 +0.2
1,682,369 - A4249_RS08385 0.19 -0.3
1,682,395 + A4249_RS08385 0.21 +0.3
1,682,395 + A4249_RS08385 0.21 +0.4
1,682,395 + A4249_RS08385 0.21 +0.3
1,682,395 + A4249_RS08385 0.21 -0.3
1,682,395 + A4249_RS08385 0.21 -0.6
1,682,395 + A4249_RS08385 0.21 -0.5
1,682,395 + A4249_RS08385 0.21 +0.4
1,682,395 + A4249_RS08385 0.21 -1.5
1,682,395 + A4249_RS08385 0.21 +0.9
1,682,395 + A4249_RS08385 0.21 +0.5
1,682,395 + A4249_RS08385 0.21 -0.2
1,682,395 + A4249_RS08385 0.21 -1.2
1,682,395 + A4249_RS08385 0.21 +1.4
1,682,396 - A4249_RS08385 0.21 -0.7
1,682,396 - A4249_RS08385 0.21 +0.1
1,682,396 - A4249_RS08385 0.21 +0.9
1,682,396 - A4249_RS08385 0.21 -0.2
1,682,396 - A4249_RS08385 0.21 -1.7
1,682,396 - A4249_RS08385 0.21 +0.3
1,682,396 - A4249_RS08385 0.21 +0.8
1,682,396 - A4249_RS08385 0.21 -0.3
1,682,396 - A4249_RS08385 0.21 -0.4
1,682,425 + A4249_RS08385 0.24 -0.2
1,682,425 + A4249_RS08385 0.24 +0.7
1,682,426 - A4249_RS08385 0.24 -0.4
1,682,426 - A4249_RS08385 0.24 -0.9
1,682,426 - A4249_RS08385 0.24 -0.3
1,682,426 - A4249_RS08385 0.24 +1.4
1,682,426 - A4249_RS08385 0.24 -0.5
1,682,426 - A4249_RS08385 0.24 +0.6
1,682,446 + A4249_RS08385 0.25 -1.6
1,682,446 + A4249_RS08385 0.25 -0.3
1,682,446 + A4249_RS08385 0.25 -0.5
1,682,447 - A4249_RS08385 0.25 -1.6
1,682,449 + A4249_RS08385 0.26 -0.9
1,682,449 + A4249_RS08385 0.26 -0.3
1,682,450 - A4249_RS08385 0.26 +1.2
1,682,450 - A4249_RS08385 0.26 +0.9
1,682,450 - A4249_RS08385 0.26 +0.0
1,682,450 - A4249_RS08385 0.26 +1.0
1,682,846 + A4249_RS08385 0.60 -0.0
1,682,846 + A4249_RS08385 0.60 +0.2
1,682,846 + A4249_RS08385 0.60 +0.3
1,682,846 + A4249_RS08385 0.60 -0.3
1,682,846 + A4249_RS08385 0.60 -0.6
1,682,846 + A4249_RS08385 0.60 +0.0
1,682,847 - A4249_RS08385 0.60 -0.1
1,682,847 - A4249_RS08385 0.60 -0.2
1,682,847 - A4249_RS08385 0.60 +0.9
1,682,847 - A4249_RS08385 0.60 +0.8
1,682,847 - A4249_RS08385 0.60 -1.8
1,682,847 - A4249_RS08385 0.60 -0.2
1,682,882 + A4249_RS08385 0.63 -1.5
1,682,883 - A4249_RS08385 0.63 -1.3
1,682,883 - A4249_RS08385 0.63 +0.6
1,683,008 + A4249_RS08385 0.74 -0.2
1,683,008 + A4249_RS08385 0.74 -0.1
1,683,066 - A4249_RS08385 0.79 -0.1
1,683,066 - A4249_RS08385 0.79 +0.4
1,683,069 - A4249_RS08385 0.80 -0.7
1,683,069 - A4249_RS08385 0.80 -0.4
1,683,153 - A4249_RS08385 0.87 -0.3

Or see this region's nucleotide sequence