Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06990 and A4249_RS06995 are separated by 3 nucleotides A4249_RS06995 and A4249_RS07000 overlap by 1 nucleotides A4249_RS07000 and A4249_RS07005 overlap by 4 nucleotides A4249_RS07005 and A4249_RS07010 overlap by 4 nucleotides A4249_RS07010 and A4249_RS07015 are separated by 80 nucleotides
A4249_RS06990: A4249_RS06990 - MT-A70 family methyltransferase, at 1,411,736 to 1,412,311
_RS06990
A4249_RS06995: A4249_RS06995 - DUF968 domain-containing protein, at 1,412,315 to 1,412,749
_RS06995
A4249_RS07000: A4249_RS07000 - hypothetical protein, at 1,412,749 to 1,413,261
_RS07000
A4249_RS07005: A4249_RS07005 - YqaJ viral recombinase family protein, at 1,413,258 to 1,413,893
_RS07005
A4249_RS07010: A4249_RS07010 - ERF family protein, at 1,413,890 to 1,414,609
_RS07010
A4249_RS07015: A4249_RS07015 - hypothetical protein, at 1,414,690 to 1,414,935
_RS07015
Position (kb)
1413
1414 Strain fitness (log2 ratio)
-2
-1
0
1 at 1412.317 kb on - strand at 1412.317 kb on - strand at 1412.317 kb on - strand at 1412.317 kb on - strand at 1412.317 kb on - strand at 1412.352 kb on + strand at 1412.353 kb on - strand at 1412.353 kb on - strand at 1412.353 kb on - strand at 1412.353 kb on - strand at 1412.353 kb on - strand at 1412.361 kb on + strand, within A4249_RS06995 at 1412.530 kb on + strand, within A4249_RS06995 at 1412.530 kb on + strand, within A4249_RS06995 at 1412.531 kb on - strand, within A4249_RS06995 at 1412.607 kb on + strand, within A4249_RS06995 at 1412.607 kb on + strand, within A4249_RS06995 at 1412.607 kb on + strand, within A4249_RS06995 at 1412.607 kb on + strand, within A4249_RS06995 at 1412.608 kb on - strand, within A4249_RS06995 at 1412.608 kb on - strand, within A4249_RS06995 at 1412.925 kb on - strand, within A4249_RS07000 at 1412.925 kb on - strand, within A4249_RS07000 at 1412.925 kb on - strand, within A4249_RS07000 at 1412.990 kb on + strand, within A4249_RS07000 at 1412.990 kb on + strand, within A4249_RS07000 at 1412.990 kb on + strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1412.991 kb on - strand, within A4249_RS07000 at 1413.287 kb on - strand at 1413.490 kb on + strand, within A4249_RS07005 at 1413.490 kb on + strand, within A4249_RS07005 at 1413.490 kb on + strand, within A4249_RS07005 at 1413.491 kb on - strand, within A4249_RS07005 at 1413.491 kb on - strand, within A4249_RS07005 at 1413.491 kb on - strand, within A4249_RS07005 at 1413.491 kb on - strand, within A4249_RS07005 at 1413.667 kb on + strand, within A4249_RS07005 at 1413.668 kb on - strand, within A4249_RS07005 at 1413.775 kb on + strand, within A4249_RS07005 at 1413.775 kb on + strand, within A4249_RS07005 at 1413.775 kb on + strand, within A4249_RS07005 at 1413.776 kb on - strand, within A4249_RS07005 at 1413.776 kb on - strand, within A4249_RS07005 at 1413.776 kb on - strand, within A4249_RS07005 at 1413.927 kb on + strand at 1413.927 kb on + strand at 1413.927 kb on + strand at 1413.928 kb on - strand at 1414.040 kb on - strand, within A4249_RS07010 at 1414.137 kb on + strand, within A4249_RS07010 at 1414.138 kb on - strand, within A4249_RS07010 at 1414.138 kb on - strand, within A4249_RS07010 at 1414.149 kb on + strand, within A4249_RS07010 at 1414.149 kb on + strand, within A4249_RS07010 at 1414.150 kb on - strand, within A4249_RS07010 at 1414.150 kb on - strand, within A4249_RS07010 at 1414.150 kb on - strand, within A4249_RS07010 at 1414.299 kb on + strand, within A4249_RS07010 at 1414.299 kb on + strand, within A4249_RS07010 at 1414.345 kb on - strand, within A4249_RS07010 at 1414.362 kb on + strand, within A4249_RS07010 at 1414.362 kb on + strand, within A4249_RS07010 at 1414.363 kb on - strand, within A4249_RS07010 at 1414.363 kb on - strand, within A4249_RS07010 at 1414.860 kb on + strand, within A4249_RS07015 at 1414.860 kb on + strand, within A4249_RS07015 at 1414.860 kb on + strand, within A4249_RS07015 at 1414.861 kb on - strand, within A4249_RS07015 at 1414.861 kb on - strand, within A4249_RS07015
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,412,317 - +1.5 1,412,317 - +0.3 1,412,317 - -1.2 1,412,317 - -0.4 1,412,317 - -0.5 1,412,352 + -0.8 1,412,353 - -0.2 1,412,353 - -0.4 1,412,353 - -0.8 1,412,353 - -0.4 1,412,353 - -0.3 1,412,361 + A4249_RS06995 0.11 -0.7 1,412,530 + A4249_RS06995 0.49 +0.1 1,412,530 + A4249_RS06995 0.49 -0.0 1,412,531 - A4249_RS06995 0.50 -1.6 1,412,607 + A4249_RS06995 0.67 -0.1 1,412,607 + A4249_RS06995 0.67 +0.1 1,412,607 + A4249_RS06995 0.67 -1.4 1,412,607 + A4249_RS06995 0.67 +0.1 1,412,608 - A4249_RS06995 0.67 -0.6 1,412,608 - A4249_RS06995 0.67 +0.1 1,412,925 - A4249_RS07000 0.34 +0.4 1,412,925 - A4249_RS07000 0.34 -0.4 1,412,925 - A4249_RS07000 0.34 +0.1 1,412,990 + A4249_RS07000 0.47 -1.0 1,412,990 + A4249_RS07000 0.47 -0.4 1,412,990 + A4249_RS07000 0.47 -0.6 1,412,991 - A4249_RS07000 0.47 -1.4 1,412,991 - A4249_RS07000 0.47 +1.1 1,412,991 - A4249_RS07000 0.47 +0.1 1,412,991 - A4249_RS07000 0.47 +0.2 1,412,991 - A4249_RS07000 0.47 -0.0 1,412,991 - A4249_RS07000 0.47 +0.8 1,412,991 - A4249_RS07000 0.47 +0.3 1,413,287 - -1.2 1,413,490 + A4249_RS07005 0.36 -1.5 1,413,490 + A4249_RS07005 0.36 -0.2 1,413,490 + A4249_RS07005 0.36 -0.8 1,413,491 - A4249_RS07005 0.37 -0.4 1,413,491 - A4249_RS07005 0.37 -0.6 1,413,491 - A4249_RS07005 0.37 -1.4 1,413,491 - A4249_RS07005 0.37 -0.2 1,413,667 + A4249_RS07005 0.64 +0.1 1,413,668 - A4249_RS07005 0.64 -0.3 1,413,775 + A4249_RS07005 0.81 +0.7 1,413,775 + A4249_RS07005 0.81 -1.0 1,413,775 + A4249_RS07005 0.81 +0.4 1,413,776 - A4249_RS07005 0.81 -0.2 1,413,776 - A4249_RS07005 0.81 +0.8 1,413,776 - A4249_RS07005 0.81 -1.4 1,413,927 + +0.2 1,413,927 + -0.2 1,413,927 + +0.6 1,413,928 - -2.1 1,414,040 - A4249_RS07010 0.21 -0.5 1,414,137 + A4249_RS07010 0.34 +0.1 1,414,138 - A4249_RS07010 0.34 -0.7 1,414,138 - A4249_RS07010 0.34 +1.6 1,414,149 + A4249_RS07010 0.36 +0.1 1,414,149 + A4249_RS07010 0.36 -1.3 1,414,150 - A4249_RS07010 0.36 +0.9 1,414,150 - A4249_RS07010 0.36 -0.1 1,414,150 - A4249_RS07010 0.36 +0.7 1,414,299 + A4249_RS07010 0.57 +0.2 1,414,299 + A4249_RS07010 0.57 -0.6 1,414,345 - A4249_RS07010 0.63 -0.0 1,414,362 + A4249_RS07010 0.66 +0.3 1,414,362 + A4249_RS07010 0.66 -0.1 1,414,363 - A4249_RS07010 0.66 -0.1 1,414,363 - A4249_RS07010 0.66 -1.1 1,414,860 + A4249_RS07015 0.69 -1.3 1,414,860 + A4249_RS07015 0.69 +0.7 1,414,860 + A4249_RS07015 0.69 +0.0 1,414,861 - A4249_RS07015 0.70 -0.1 1,414,861 - A4249_RS07015 0.70 -0.2
Or see this region's nucleotide sequence