Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05085 and A4249_RS05090 are separated by 201 nucleotides A4249_RS05090 and A4249_RS05095 are separated by 122 nucleotides A4249_RS05095 and A4249_RS05100 are separated by 68 nucleotides A4249_RS05100 and A4249_RS05105 are separated by 94 nucleotides
A4249_RS05085: A4249_RS05085 - tRNA-Pro, at 1,049,122 to 1,049,198
_RS05085
A4249_RS05090: A4249_RS05090 - tRNA-Gln, at 1,049,400 to 1,049,473
_RS05090
A4249_RS05095: A4249_RS05095 - DNA starvation/stationary phase protection protein, at 1,049,596 to 1,050,114
_RS05095
A4249_RS05100: A4249_RS05100 - hypothetical protein, at 1,050,183 to 1,050,545
_RS05100
A4249_RS05105: A4249_RS05105 - tyrosine-type recombinase/integrase, at 1,050,640 to 1,051,734
_RS05105
Position (kb)
1050
1051 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1049.310 kb on + strand at 1049.311 kb on - strand at 1049.508 kb on + strand at 1049.509 kb on - strand at 1049.509 kb on - strand at 1049.522 kb on + strand at 1049.522 kb on + strand at 1049.522 kb on + strand at 1049.523 kb on - strand at 1049.523 kb on - strand at 1049.523 kb on - strand at 1049.523 kb on - strand at 1049.523 kb on - strand at 1049.523 kb on - strand at 1049.563 kb on + strand at 1049.563 kb on + strand at 1049.563 kb on + strand at 1049.563 kb on + strand at 1049.563 kb on + strand at 1049.563 kb on + strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.564 kb on - strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.579 kb on + strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.580 kb on - strand at 1049.719 kb on + strand, within A4249_RS05095 at 1049.719 kb on + strand, within A4249_RS05095 at 1049.720 kb on - strand, within A4249_RS05095 at 1049.720 kb on - strand, within A4249_RS05095 at 1049.720 kb on - strand, within A4249_RS05095 at 1049.720 kb on - strand, within A4249_RS05095 at 1049.720 kb on - strand, within A4249_RS05095 at 1049.720 kb on - strand, within A4249_RS05095 at 1049.773 kb on + strand, within A4249_RS05095 at 1049.773 kb on + strand, within A4249_RS05095 at 1049.773 kb on + strand, within A4249_RS05095 at 1049.774 kb on - strand, within A4249_RS05095 at 1049.872 kb on - strand, within A4249_RS05095 at 1049.920 kb on + strand, within A4249_RS05095 at 1049.920 kb on + strand, within A4249_RS05095 at 1049.920 kb on + strand, within A4249_RS05095 at 1049.920 kb on + strand, within A4249_RS05095 at 1049.920 kb on + strand, within A4249_RS05095 at 1049.921 kb on - strand, within A4249_RS05095 at 1049.921 kb on - strand, within A4249_RS05095 at 1049.937 kb on + strand, within A4249_RS05095 at 1049.937 kb on + strand, within A4249_RS05095 at 1049.937 kb on + strand, within A4249_RS05095 at 1050.016 kb on - strand, within A4249_RS05095 at 1050.016 kb on - strand, within A4249_RS05095 at 1050.016 kb on - strand, within A4249_RS05095 at 1050.016 kb on - strand, within A4249_RS05095 at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.139 kb on + strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.140 kb on - strand at 1050.143 kb on + strand at 1050.143 kb on + strand at 1050.143 kb on + strand at 1050.143 kb on + strand at 1050.143 kb on + strand at 1050.144 kb on - strand at 1050.144 kb on - strand at 1050.144 kb on - strand at 1050.216 kb on - strand at 1050.216 kb on - strand at 1050.216 kb on - strand at 1050.254 kb on + strand, within A4249_RS05100 at 1050.254 kb on + strand, within A4249_RS05100 at 1050.254 kb on + strand, within A4249_RS05100 at 1050.255 kb on - strand, within A4249_RS05100 at 1050.255 kb on - strand, within A4249_RS05100 at 1050.275 kb on + strand, within A4249_RS05100 at 1050.275 kb on + strand, within A4249_RS05100 at 1050.275 kb on + strand, within A4249_RS05100 at 1050.276 kb on - strand, within A4249_RS05100 at 1050.276 kb on - strand, within A4249_RS05100 at 1050.276 kb on - strand, within A4249_RS05100 at 1050.318 kb on + strand, within A4249_RS05100 at 1050.339 kb on + strand, within A4249_RS05100 at 1050.339 kb on + strand, within A4249_RS05100 at 1050.339 kb on + strand, within A4249_RS05100 at 1050.339 kb on + strand, within A4249_RS05100 at 1050.339 kb on + strand, within A4249_RS05100 at 1050.339 kb on + strand, within A4249_RS05100 at 1050.573 kb on + strand at 1050.574 kb on - strand at 1050.823 kb on + strand, within A4249_RS05105 at 1050.823 kb on + strand, within A4249_RS05105 at 1050.824 kb on - strand, within A4249_RS05105 at 1050.946 kb on - strand, within A4249_RS05105 at 1050.946 kb on - strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.049 kb on + strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.050 kb on - strand, within A4249_RS05105 at 1051.114 kb on + strand, within A4249_RS05105 at 1051.148 kb on + strand, within A4249_RS05105 at 1051.149 kb on - strand, within A4249_RS05105 at 1051.158 kb on + strand, within A4249_RS05105 at 1051.158 kb on + strand, within A4249_RS05105 at 1051.158 kb on + strand, within A4249_RS05105 at 1051.158 kb on + strand, within A4249_RS05105 at 1051.158 kb on + strand, within A4249_RS05105 at 1051.159 kb on - strand, within A4249_RS05105 at 1051.159 kb on - strand, within A4249_RS05105 at 1051.168 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.380 kb on + strand, within A4249_RS05105 at 1051.381 kb on - strand, within A4249_RS05105 at 1051.381 kb on - strand, within A4249_RS05105 at 1051.381 kb on - strand, within A4249_RS05105 at 1051.381 kb on - strand, within A4249_RS05105 at 1051.381 kb on - strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.483 kb on + strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105 at 1051.484 kb on - strand, within A4249_RS05105
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,049,310 + +1.4 1,049,311 - -0.6 1,049,508 + -0.5 1,049,509 - -0.5 1,049,509 - +0.0 1,049,522 + -0.9 1,049,522 + +0.1 1,049,522 + -0.2 1,049,523 - -0.3 1,049,523 - -1.8 1,049,523 - +0.1 1,049,523 - -0.6 1,049,523 - -0.6 1,049,523 - +0.9 1,049,563 + -0.3 1,049,563 + +0.3 1,049,563 + -0.2 1,049,563 + +0.5 1,049,563 + -0.0 1,049,563 + -0.4 1,049,564 - +1.0 1,049,564 - -1.0 1,049,564 - -0.1 1,049,564 - +1.8 1,049,564 - +0.7 1,049,564 - -0.6 1,049,564 - -1.1 1,049,564 - -1.2 1,049,564 - +0.3 1,049,564 - +0.5 1,049,579 + +0.2 1,049,579 + -0.2 1,049,579 + +0.5 1,049,579 + -0.4 1,049,579 + +1.2 1,049,579 + -0.7 1,049,579 + +1.2 1,049,579 + -0.2 1,049,579 + -0.1 1,049,580 - +0.1 1,049,580 - +0.0 1,049,580 - -0.2 1,049,580 - +0.4 1,049,580 - -0.8 1,049,580 - -0.8 1,049,580 - -0.2 1,049,580 - -1.6 1,049,719 + A4249_RS05095 0.24 +1.2 1,049,719 + A4249_RS05095 0.24 +0.8 1,049,720 - A4249_RS05095 0.24 -0.6 1,049,720 - A4249_RS05095 0.24 +0.3 1,049,720 - A4249_RS05095 0.24 -0.5 1,049,720 - A4249_RS05095 0.24 -0.7 1,049,720 - A4249_RS05095 0.24 -0.1 1,049,720 - A4249_RS05095 0.24 +1.7 1,049,773 + A4249_RS05095 0.34 -0.3 1,049,773 + A4249_RS05095 0.34 -1.4 1,049,773 + A4249_RS05095 0.34 -0.1 1,049,774 - A4249_RS05095 0.34 -0.3 1,049,872 - A4249_RS05095 0.53 +0.7 1,049,920 + A4249_RS05095 0.62 -0.2 1,049,920 + A4249_RS05095 0.62 +2.4 1,049,920 + A4249_RS05095 0.62 -0.5 1,049,920 + A4249_RS05095 0.62 +0.8 1,049,920 + A4249_RS05095 0.62 -0.0 1,049,921 - A4249_RS05095 0.63 -1.4 1,049,921 - A4249_RS05095 0.63 -1.1 1,049,937 + A4249_RS05095 0.66 +0.1 1,049,937 + A4249_RS05095 0.66 -0.3 1,049,937 + A4249_RS05095 0.66 +0.4 1,050,016 - A4249_RS05095 0.81 -0.1 1,050,016 - A4249_RS05095 0.81 +0.5 1,050,016 - A4249_RS05095 0.81 -0.3 1,050,016 - A4249_RS05095 0.81 +0.3 1,050,139 + -0.1 1,050,139 + +0.4 1,050,139 + -1.3 1,050,139 + -0.6 1,050,139 + -0.0 1,050,139 + -0.1 1,050,139 + -0.3 1,050,139 + +0.8 1,050,139 + +0.2 1,050,139 + -0.2 1,050,139 + +0.7 1,050,139 + -2.3 1,050,139 + -0.9 1,050,139 + +0.4 1,050,140 - -0.1 1,050,140 - +1.6 1,050,140 - -0.9 1,050,140 - -0.2 1,050,140 - -1.0 1,050,140 - -1.4 1,050,140 - +0.4 1,050,140 - -0.7 1,050,140 - +0.1 1,050,140 - +0.3 1,050,140 - +0.0 1,050,140 - +0.1 1,050,140 - -0.7 1,050,140 - -2.1 1,050,140 - -0.7 1,050,143 + +0.4 1,050,143 + +0.6 1,050,143 + -0.5 1,050,143 + -1.2 1,050,143 + +0.1 1,050,144 - -1.2 1,050,144 - -0.1 1,050,144 - +0.5 1,050,216 - +0.3 1,050,216 - -1.1 1,050,216 - +0.3 1,050,254 + A4249_RS05100 0.20 +0.3 1,050,254 + A4249_RS05100 0.20 +0.3 1,050,254 + A4249_RS05100 0.20 -1.1 1,050,255 - A4249_RS05100 0.20 -0.9 1,050,255 - A4249_RS05100 0.20 +0.3 1,050,275 + A4249_RS05100 0.25 -0.0 1,050,275 + A4249_RS05100 0.25 -1.7 1,050,275 + A4249_RS05100 0.25 +0.7 1,050,276 - A4249_RS05100 0.26 +0.5 1,050,276 - A4249_RS05100 0.26 -2.1 1,050,276 - A4249_RS05100 0.26 -0.4 1,050,318 + A4249_RS05100 0.37 -0.2 1,050,339 + A4249_RS05100 0.43 -1.4 1,050,339 + A4249_RS05100 0.43 -0.3 1,050,339 + A4249_RS05100 0.43 +0.1 1,050,339 + A4249_RS05100 0.43 +0.2 1,050,339 + A4249_RS05100 0.43 -0.3 1,050,339 + A4249_RS05100 0.43 -0.9 1,050,573 + +0.8 1,050,574 - -0.8 1,050,823 + A4249_RS05105 0.17 +0.2 1,050,823 + A4249_RS05105 0.17 -1.1 1,050,824 - A4249_RS05105 0.17 +1.3 1,050,946 - A4249_RS05105 0.28 -1.0 1,050,946 - A4249_RS05105 0.28 -0.8 1,051,049 + A4249_RS05105 0.37 +1.4 1,051,049 + A4249_RS05105 0.37 -0.1 1,051,049 + A4249_RS05105 0.37 -0.4 1,051,049 + A4249_RS05105 0.37 -0.3 1,051,049 + A4249_RS05105 0.37 -0.7 1,051,049 + A4249_RS05105 0.37 +0.5 1,051,049 + A4249_RS05105 0.37 -0.5 1,051,049 + A4249_RS05105 0.37 -0.2 1,051,049 + A4249_RS05105 0.37 +0.1 1,051,049 + A4249_RS05105 0.37 -0.3 1,051,049 + A4249_RS05105 0.37 -0.6 1,051,049 + A4249_RS05105 0.37 -0.3 1,051,050 - A4249_RS05105 0.37 +0.4 1,051,050 - A4249_RS05105 0.37 +1.4 1,051,050 - A4249_RS05105 0.37 -0.4 1,051,050 - A4249_RS05105 0.37 +1.0 1,051,050 - A4249_RS05105 0.37 -1.0 1,051,050 - A4249_RS05105 0.37 -0.6 1,051,050 - A4249_RS05105 0.37 -0.8 1,051,050 - A4249_RS05105 0.37 +0.3 1,051,050 - A4249_RS05105 0.37 -0.1 1,051,114 + A4249_RS05105 0.43 -0.1 1,051,148 + A4249_RS05105 0.46 -0.2 1,051,149 - A4249_RS05105 0.46 +0.3 1,051,158 + A4249_RS05105 0.47 +0.7 1,051,158 + A4249_RS05105 0.47 -1.0 1,051,158 + A4249_RS05105 0.47 +0.2 1,051,158 + A4249_RS05105 0.47 -0.7 1,051,158 + A4249_RS05105 0.47 -0.5 1,051,159 - A4249_RS05105 0.47 +0.0 1,051,159 - A4249_RS05105 0.47 +1.0 1,051,168 + A4249_RS05105 0.48 -1.0 1,051,380 + A4249_RS05105 0.68 +0.5 1,051,380 + A4249_RS05105 0.68 -0.1 1,051,380 + A4249_RS05105 0.68 +0.9 1,051,380 + A4249_RS05105 0.68 +0.3 1,051,380 + A4249_RS05105 0.68 -0.4 1,051,380 + A4249_RS05105 0.68 -0.1 1,051,380 + A4249_RS05105 0.68 +0.0 1,051,380 + A4249_RS05105 0.68 -0.6 1,051,381 - A4249_RS05105 0.68 +0.7 1,051,381 - A4249_RS05105 0.68 -1.8 1,051,381 - A4249_RS05105 0.68 -0.6 1,051,381 - A4249_RS05105 0.68 -1.4 1,051,381 - A4249_RS05105 0.68 +0.2 1,051,483 + A4249_RS05105 0.77 -0.5 1,051,483 + A4249_RS05105 0.77 +0.1 1,051,483 + A4249_RS05105 0.77 -0.2 1,051,483 + A4249_RS05105 0.77 -0.4 1,051,483 + A4249_RS05105 0.77 +0.1 1,051,483 + A4249_RS05105 0.77 -0.5 1,051,483 + A4249_RS05105 0.77 +0.3 1,051,483 + A4249_RS05105 0.77 +0.5 1,051,483 + A4249_RS05105 0.77 -0.1 1,051,484 - A4249_RS05105 0.77 -0.3 1,051,484 - A4249_RS05105 0.77 -1.9 1,051,484 - A4249_RS05105 0.77 +0.2 1,051,484 - A4249_RS05105 0.77 -0.6 1,051,484 - A4249_RS05105 0.77 -0.7 1,051,484 - A4249_RS05105 0.77 -0.7 1,051,484 - A4249_RS05105 0.77 +0.7 1,051,484 - A4249_RS05105 0.77 +0.1 1,051,484 - A4249_RS05105 0.77 -0.1
Or see this region's nucleotide sequence