Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04960 and A4249_RS04970 are separated by 377 nucleotides A4249_RS04970 and A4249_RS04975 overlap by 4 nucleotides A4249_RS04975 and A4249_RS04980 are separated by 106 nucleotides
A4249_RS04960: A4249_RS04960 - UvrD-helicase domain-containing protein, at 1,030,493 to 1,032,847
_RS04960
A4249_RS04970: A4249_RS04970 - ribbon-helix-helix domain-containing protein, at 1,033,225 to 1,033,449
_RS04970
A4249_RS04975: A4249_RS04975 - YbaY family lipoprotein, at 1,033,446 to 1,033,853
_RS04975
A4249_RS04980: A4249_RS04980 - EamA family transporter, at 1,033,960 to 1,034,844
_RS04980
Position (kb)
1033
1034 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1032.602 kb on - strand, within A4249_RS04960 at 1032.860 kb on - strand at 1032.889 kb on + strand at 1032.890 kb on - strand at 1032.890 kb on - strand at 1032.964 kb on + strand at 1032.964 kb on + strand at 1032.964 kb on + strand at 1032.965 kb on - strand at 1032.965 kb on - strand at 1033.046 kb on + strand at 1033.046 kb on + strand at 1033.046 kb on + strand at 1033.046 kb on + strand at 1033.046 kb on + strand at 1033.197 kb on + strand at 1033.197 kb on + strand at 1033.197 kb on + strand at 1033.198 kb on - strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.203 kb on + strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.204 kb on - strand at 1033.207 kb on + strand at 1033.208 kb on - strand at 1033.208 kb on - strand at 1033.390 kb on + strand, within A4249_RS04970 at 1033.520 kb on + strand, within A4249_RS04975 at 1033.570 kb on + strand, within A4249_RS04975 at 1033.570 kb on + strand, within A4249_RS04975 at 1033.570 kb on + strand, within A4249_RS04975 at 1033.570 kb on + strand, within A4249_RS04975 at 1033.570 kb on + strand, within A4249_RS04975 at 1033.570 kb on + strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.571 kb on - strand, within A4249_RS04975 at 1033.748 kb on - strand, within A4249_RS04975 at 1033.748 kb on - strand, within A4249_RS04975 at 1033.764 kb on + strand, within A4249_RS04975 at 1033.765 kb on - strand, within A4249_RS04975 at 1033.765 kb on - strand, within A4249_RS04975 at 1033.919 kb on - strand at 1033.919 kb on - strand at 1033.928 kb on + strand at 1033.929 kb on - strand at 1034.200 kb on + strand, within A4249_RS04980 at 1034.200 kb on + strand, within A4249_RS04980 at 1034.200 kb on + strand, within A4249_RS04980 at 1034.200 kb on + strand, within A4249_RS04980 at 1034.200 kb on + strand, within A4249_RS04980 at 1034.200 kb on + strand, within A4249_RS04980 at 1034.200 kb on + strand, within A4249_RS04980 at 1034.201 kb on - strand, within A4249_RS04980 at 1034.201 kb on - strand, within A4249_RS04980 at 1034.201 kb on - strand, within A4249_RS04980 at 1034.201 kb on - strand, within A4249_RS04980 at 1034.212 kb on + strand, within A4249_RS04980 at 1034.342 kb on + strand, within A4249_RS04980 at 1034.342 kb on + strand, within A4249_RS04980 at 1034.342 kb on + strand, within A4249_RS04980 at 1034.343 kb on - strand, within A4249_RS04980 at 1034.343 kb on - strand, within A4249_RS04980 at 1034.343 kb on - strand, within A4249_RS04980 at 1034.374 kb on + strand, within A4249_RS04980 at 1034.374 kb on + strand, within A4249_RS04980 at 1034.374 kb on + strand, within A4249_RS04980 at 1034.375 kb on - strand, within A4249_RS04980 at 1034.445 kb on - strand, within A4249_RS04980
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,032,602 - A4249_RS04960 0.90 +1.1 1,032,860 - -0.2 1,032,889 + -0.6 1,032,890 - +1.0 1,032,890 - -1.0 1,032,964 + -0.5 1,032,964 + -0.4 1,032,964 + -0.0 1,032,965 - +1.0 1,032,965 - -1.1 1,033,046 + -0.8 1,033,046 + +1.2 1,033,046 + +0.4 1,033,046 + -0.6 1,033,046 + -0.3 1,033,197 + -1.7 1,033,197 + -0.6 1,033,197 + -1.3 1,033,198 - +1.6 1,033,203 + +0.3 1,033,203 + +0.7 1,033,203 + -0.8 1,033,203 + +0.2 1,033,203 + +0.3 1,033,203 + +0.9 1,033,203 + +0.1 1,033,203 + -1.2 1,033,203 + +0.1 1,033,204 - -0.1 1,033,204 - -0.1 1,033,204 - -0.9 1,033,204 - +0.3 1,033,204 - -1.0 1,033,204 - +0.2 1,033,204 - -0.4 1,033,204 - -2.0 1,033,204 - +1.0 1,033,204 - -0.7 1,033,204 - -1.0 1,033,204 - -0.1 1,033,207 + -0.5 1,033,208 - -1.0 1,033,208 - +1.0 1,033,390 + A4249_RS04970 0.73 -1.0 1,033,520 + A4249_RS04975 0.18 +0.8 1,033,570 + A4249_RS04975 0.30 -0.4 1,033,570 + A4249_RS04975 0.30 +1.2 1,033,570 + A4249_RS04975 0.30 -0.1 1,033,570 + A4249_RS04975 0.30 +1.5 1,033,570 + A4249_RS04975 0.30 +1.3 1,033,570 + A4249_RS04975 0.30 +0.8 1,033,571 - A4249_RS04975 0.31 +0.2 1,033,571 - A4249_RS04975 0.31 -0.8 1,033,571 - A4249_RS04975 0.31 -1.6 1,033,571 - A4249_RS04975 0.31 -0.6 1,033,571 - A4249_RS04975 0.31 -0.4 1,033,571 - A4249_RS04975 0.31 -0.9 1,033,571 - A4249_RS04975 0.31 -0.3 1,033,571 - A4249_RS04975 0.31 -0.1 1,033,571 - A4249_RS04975 0.31 +0.2 1,033,571 - A4249_RS04975 0.31 -0.9 1,033,571 - A4249_RS04975 0.31 -0.7 1,033,571 - A4249_RS04975 0.31 +1.1 1,033,748 - A4249_RS04975 0.74 -0.5 1,033,748 - A4249_RS04975 0.74 +0.0 1,033,764 + A4249_RS04975 0.78 -1.1 1,033,765 - A4249_RS04975 0.78 -0.1 1,033,765 - A4249_RS04975 0.78 +1.2 1,033,919 - -0.3 1,033,919 - +0.2 1,033,928 + +0.6 1,033,929 - +0.4 1,034,200 + A4249_RS04980 0.27 -0.6 1,034,200 + A4249_RS04980 0.27 -0.0 1,034,200 + A4249_RS04980 0.27 +0.2 1,034,200 + A4249_RS04980 0.27 +0.3 1,034,200 + A4249_RS04980 0.27 -0.5 1,034,200 + A4249_RS04980 0.27 +0.9 1,034,200 + A4249_RS04980 0.27 -0.8 1,034,201 - A4249_RS04980 0.27 -2.7 1,034,201 - A4249_RS04980 0.27 +0.3 1,034,201 - A4249_RS04980 0.27 -1.6 1,034,201 - A4249_RS04980 0.27 +1.7 1,034,212 + A4249_RS04980 0.28 -0.7 1,034,342 + A4249_RS04980 0.43 +2.4 1,034,342 + A4249_RS04980 0.43 -0.6 1,034,342 + A4249_RS04980 0.43 -1.1 1,034,343 - A4249_RS04980 0.43 +0.1 1,034,343 - A4249_RS04980 0.43 -0.1 1,034,343 - A4249_RS04980 0.43 -0.2 1,034,374 + A4249_RS04980 0.47 -0.1 1,034,374 + A4249_RS04980 0.47 -1.1 1,034,374 + A4249_RS04980 0.47 -0.6 1,034,375 - A4249_RS04980 0.47 +0.6 1,034,445 - A4249_RS04980 0.55 -0.7
Or see this region's nucleotide sequence