Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04870 and A4249_RS04875 are separated by 4 nucleotides A4249_RS04875 and A4249_RS04880 are separated by 0 nucleotides A4249_RS04880 and A4249_RS04885 are separated by 183 nucleotides
A4249_RS04870: A4249_RS04870 - NAD(P)H:quinone oxidoreductase, at 1,015,129 to 1,015,731
_RS04870
A4249_RS04875: A4249_RS04875 - 4,5-DOPA dioxygenase extradiol, at 1,015,736 to 1,016,494
_RS04875
A4249_RS04880: A4249_RS04880 - AMP-binding protein, at 1,016,495 to 1,018,048
_RS04880
A4249_RS04885: A4249_RS04885 - lipoyl synthase, at 1,018,232 to 1,019,194
_RS04885
Position (kb) 1016
1017
1018
1019 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1015.561 kb on + strand, within A4249_RS04870 at 1015.613 kb on - strand, within A4249_RS04870 at 1015.698 kb on + strand at 1015.699 kb on - strand at 1015.797 kb on - strand at 1015.918 kb on - strand, within A4249_RS04875 at 1015.962 kb on - strand, within A4249_RS04875 at 1016.141 kb on + strand, within A4249_RS04875 at 1016.141 kb on + strand, within A4249_RS04875 at 1016.141 kb on + strand, within A4249_RS04875 at 1016.142 kb on - strand, within A4249_RS04875 at 1016.142 kb on - strand, within A4249_RS04875 at 1016.142 kb on - strand, within A4249_RS04875 at 1016.142 kb on - strand, within A4249_RS04875 at 1016.255 kb on + strand, within A4249_RS04875 at 1016.255 kb on + strand, within A4249_RS04875 at 1016.256 kb on - strand, within A4249_RS04875 at 1016.256 kb on - strand, within A4249_RS04875 at 1016.256 kb on - strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.396 kb on + strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.397 kb on - strand, within A4249_RS04875 at 1016.398 kb on + strand, within A4249_RS04875 at 1016.398 kb on + strand, within A4249_RS04875 at 1016.398 kb on + strand, within A4249_RS04875 at 1016.398 kb on + strand, within A4249_RS04875 at 1016.399 kb on - strand, within A4249_RS04875 at 1016.399 kb on - strand, within A4249_RS04875 at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.538 kb on + strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.539 kb on - strand at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.832 kb on + strand, within A4249_RS04880 at 1016.833 kb on - strand, within A4249_RS04880 at 1016.833 kb on - strand, within A4249_RS04880 at 1016.833 kb on - strand, within A4249_RS04880 at 1016.833 kb on - strand, within A4249_RS04880 at 1016.846 kb on + strand, within A4249_RS04880 at 1016.846 kb on + strand, within A4249_RS04880 at 1016.846 kb on + strand, within A4249_RS04880 at 1016.847 kb on - strand, within A4249_RS04880 at 1016.847 kb on - strand, within A4249_RS04880 at 1016.922 kb on + strand, within A4249_RS04880 at 1016.922 kb on + strand, within A4249_RS04880 at 1016.922 kb on + strand, within A4249_RS04880 at 1016.922 kb on + strand, within A4249_RS04880 at 1016.922 kb on + strand, within A4249_RS04880 at 1016.922 kb on + strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1016.923 kb on - strand, within A4249_RS04880 at 1017.037 kb on + strand, within A4249_RS04880 at 1017.038 kb on - strand, within A4249_RS04880 at 1017.038 kb on - strand, within A4249_RS04880 at 1017.038 kb on - strand, within A4249_RS04880 at 1017.220 kb on - strand, within A4249_RS04880 at 1017.220 kb on - strand, within A4249_RS04880 at 1017.585 kb on + strand, within A4249_RS04880 at 1017.585 kb on + strand, within A4249_RS04880 at 1017.586 kb on - strand, within A4249_RS04880 at 1017.586 kb on - strand, within A4249_RS04880 at 1017.586 kb on - strand, within A4249_RS04880 at 1017.877 kb on + strand, within A4249_RS04880 at 1017.877 kb on + strand, within A4249_RS04880 at 1017.878 kb on - strand, within A4249_RS04880 at 1017.878 kb on - strand, within A4249_RS04880 at 1017.878 kb on - strand, within A4249_RS04880 at 1017.878 kb on - strand, within A4249_RS04880 at 1017.878 kb on - strand, within A4249_RS04880 at 1017.927 kb on + strand at 1017.927 kb on + strand at 1017.928 kb on - strand at 1017.928 kb on - strand at 1017.928 kb on - strand at 1018.059 kb on + strand at 1018.105 kb on + strand at 1018.106 kb on - strand at 1018.202 kb on + strand at 1018.224 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,015,561 + A4249_RS04870 0.72 -0.4 1,015,613 - A4249_RS04870 0.80 -0.0 1,015,698 + +0.3 1,015,699 - -0.3 1,015,797 - +0.5 1,015,918 - A4249_RS04875 0.24 -0.9 1,015,962 - A4249_RS04875 0.30 -0.5 1,016,141 + A4249_RS04875 0.53 +0.1 1,016,141 + A4249_RS04875 0.53 +0.6 1,016,141 + A4249_RS04875 0.53 +0.9 1,016,142 - A4249_RS04875 0.53 -0.4 1,016,142 - A4249_RS04875 0.53 -0.2 1,016,142 - A4249_RS04875 0.53 +0.7 1,016,142 - A4249_RS04875 0.53 -0.6 1,016,255 + A4249_RS04875 0.68 +0.1 1,016,255 + A4249_RS04875 0.68 -0.6 1,016,256 - A4249_RS04875 0.69 -1.2 1,016,256 - A4249_RS04875 0.69 +0.7 1,016,256 - A4249_RS04875 0.69 +0.0 1,016,396 + A4249_RS04875 0.87 -1.7 1,016,396 + A4249_RS04875 0.87 +1.4 1,016,396 + A4249_RS04875 0.87 +0.2 1,016,396 + A4249_RS04875 0.87 -1.7 1,016,396 + A4249_RS04875 0.87 -0.7 1,016,396 + A4249_RS04875 0.87 -0.1 1,016,396 + A4249_RS04875 0.87 -0.2 1,016,396 + A4249_RS04875 0.87 +0.8 1,016,397 - A4249_RS04875 0.87 -0.1 1,016,397 - A4249_RS04875 0.87 +0.6 1,016,397 - A4249_RS04875 0.87 -0.3 1,016,397 - A4249_RS04875 0.87 +0.1 1,016,397 - A4249_RS04875 0.87 -0.4 1,016,397 - A4249_RS04875 0.87 +0.1 1,016,397 - A4249_RS04875 0.87 -1.1 1,016,397 - A4249_RS04875 0.87 -1.7 1,016,397 - A4249_RS04875 0.87 -1.1 1,016,397 - A4249_RS04875 0.87 +0.4 1,016,397 - A4249_RS04875 0.87 +0.4 1,016,397 - A4249_RS04875 0.87 +0.9 1,016,397 - A4249_RS04875 0.87 +0.1 1,016,398 + A4249_RS04875 0.87 +0.7 1,016,398 + A4249_RS04875 0.87 +0.5 1,016,398 + A4249_RS04875 0.87 +1.2 1,016,398 + A4249_RS04875 0.87 +0.8 1,016,399 - A4249_RS04875 0.87 -0.1 1,016,399 - A4249_RS04875 0.87 -0.8 1,016,538 + +1.0 1,016,538 + +0.5 1,016,538 + +0.3 1,016,538 + +1.2 1,016,538 + -1.1 1,016,538 + -0.8 1,016,538 + +0.8 1,016,538 + -1.4 1,016,538 + -0.6 1,016,538 + +0.3 1,016,538 + +0.7 1,016,538 + +0.3 1,016,539 - +0.8 1,016,539 - +0.8 1,016,539 - -0.7 1,016,539 - +0.0 1,016,539 - +0.6 1,016,539 - +0.4 1,016,539 - -0.4 1,016,539 - +1.2 1,016,539 - +1.3 1,016,539 - +0.8 1,016,832 + A4249_RS04880 0.22 +0.8 1,016,832 + A4249_RS04880 0.22 +0.4 1,016,832 + A4249_RS04880 0.22 +1.0 1,016,832 + A4249_RS04880 0.22 +1.7 1,016,832 + A4249_RS04880 0.22 +0.2 1,016,832 + A4249_RS04880 0.22 +0.8 1,016,832 + A4249_RS04880 0.22 +3.4 1,016,832 + A4249_RS04880 0.22 -1.6 1,016,832 + A4249_RS04880 0.22 +0.6 1,016,833 - A4249_RS04880 0.22 +0.3 1,016,833 - A4249_RS04880 0.22 -0.6 1,016,833 - A4249_RS04880 0.22 +0.2 1,016,833 - A4249_RS04880 0.22 +0.9 1,016,846 + A4249_RS04880 0.23 +0.3 1,016,846 + A4249_RS04880 0.23 +1.0 1,016,846 + A4249_RS04880 0.23 +0.9 1,016,847 - A4249_RS04880 0.23 +1.6 1,016,847 - A4249_RS04880 0.23 -0.1 1,016,922 + A4249_RS04880 0.27 -0.3 1,016,922 + A4249_RS04880 0.27 +0.8 1,016,922 + A4249_RS04880 0.27 -0.3 1,016,922 + A4249_RS04880 0.27 +1.9 1,016,922 + A4249_RS04880 0.27 +2.0 1,016,922 + A4249_RS04880 0.27 +0.9 1,016,923 - A4249_RS04880 0.28 -0.7 1,016,923 - A4249_RS04880 0.28 -1.0 1,016,923 - A4249_RS04880 0.28 +1.2 1,016,923 - A4249_RS04880 0.28 -0.2 1,016,923 - A4249_RS04880 0.28 -0.1 1,016,923 - A4249_RS04880 0.28 +0.2 1,016,923 - A4249_RS04880 0.28 -0.6 1,017,037 + A4249_RS04880 0.35 -1.4 1,017,038 - A4249_RS04880 0.35 +0.4 1,017,038 - A4249_RS04880 0.35 +1.5 1,017,038 - A4249_RS04880 0.35 +0.6 1,017,220 - A4249_RS04880 0.47 -1.1 1,017,220 - A4249_RS04880 0.47 +0.2 1,017,585 + A4249_RS04880 0.70 +0.4 1,017,585 + A4249_RS04880 0.70 +1.0 1,017,586 - A4249_RS04880 0.70 -1.3 1,017,586 - A4249_RS04880 0.70 +1.4 1,017,586 - A4249_RS04880 0.70 -1.9 1,017,877 + A4249_RS04880 0.89 +0.2 1,017,877 + A4249_RS04880 0.89 +0.1 1,017,878 - A4249_RS04880 0.89 +0.8 1,017,878 - A4249_RS04880 0.89 -1.0 1,017,878 - A4249_RS04880 0.89 +1.5 1,017,878 - A4249_RS04880 0.89 -0.3 1,017,878 - A4249_RS04880 0.89 +0.2 1,017,927 + -1.4 1,017,927 + +0.2 1,017,928 - +0.2 1,017,928 - -0.1 1,017,928 - +0.4 1,018,059 + -0.1 1,018,105 + -0.3 1,018,106 - +0.4 1,018,202 + +0.9 1,018,224 + -0.6
Or see this region's nucleotide sequence