Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04755 and A4249_RS04760 overlap by 4 nucleotides A4249_RS04760 and A4249_RS04765 overlap by 4 nucleotides A4249_RS04765 and A4249_RS04770 are separated by 144 nucleotides A4249_RS04770 and A4249_RS04775 overlap by 1 nucleotides
A4249_RS04755: A4249_RS04755 - TatD family hydrolase, at 987,589 to 988,371
_RS04755
A4249_RS04760: A4249_RS04760 - MBL fold metallo-hydrolase, at 988,368 to 989,162
_RS04760
A4249_RS04765: A4249_RS04765 - ATP-dependent DNA helicase RecG, at 989,159 to 991,246
_RS04765
A4249_RS04770: A4249_RS04770 - succinate dehydrogenase assembly factor 2, at 991,391 to 991,732
_RS04770
A4249_RS04775: A4249_RS04775 - transcription-repair coupling factor, at 991,732 to 995,181
_RS04775
Position (kb) 989
990
991
992 Strain fitness (log2 ratio) -1
0
1 at 988.207 kb on + strand, within A4249_RS04755 at 988.207 kb on + strand, within A4249_RS04755 at 988.207 kb on + strand, within A4249_RS04755 at 988.208 kb on - strand, within A4249_RS04755 at 988.208 kb on - strand, within A4249_RS04755 at 988.252 kb on + strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.321 kb on - strand at 988.355 kb on + strand at 988.599 kb on + strand, within A4249_RS04760 at 988.599 kb on + strand, within A4249_RS04760 at 988.599 kb on + strand, within A4249_RS04760 at 988.599 kb on + strand, within A4249_RS04760 at 988.599 kb on + strand, within A4249_RS04760 at 988.599 kb on + strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.600 kb on - strand, within A4249_RS04760 at 988.728 kb on + strand, within A4249_RS04760 at 988.728 kb on + strand, within A4249_RS04760 at 988.728 kb on + strand, within A4249_RS04760 at 988.728 kb on + strand, within A4249_RS04760 at 988.729 kb on - strand, within A4249_RS04760 at 988.729 kb on - strand, within A4249_RS04760 at 988.729 kb on - strand, within A4249_RS04760 at 988.729 kb on - strand, within A4249_RS04760 at 988.729 kb on - strand, within A4249_RS04760 at 988.729 kb on - strand, within A4249_RS04760 at 988.899 kb on + strand, within A4249_RS04760 at 988.900 kb on - strand, within A4249_RS04760 at 988.983 kb on + strand, within A4249_RS04760 at 988.984 kb on - strand, within A4249_RS04760 at 989.048 kb on - strand, within A4249_RS04760 at 989.048 kb on - strand, within A4249_RS04760 at 989.160 kb on + strand at 989.196 kb on - strand at 989.326 kb on - strand at 989.808 kb on + strand, within A4249_RS04765 at 989.946 kb on + strand, within A4249_RS04765 at 989.946 kb on + strand, within A4249_RS04765 at 989.946 kb on + strand, within A4249_RS04765 at 989.947 kb on - strand, within A4249_RS04765 at 989.947 kb on - strand, within A4249_RS04765 at 990.245 kb on + strand, within A4249_RS04765 at 990.245 kb on + strand, within A4249_RS04765 at 990.246 kb on - strand, within A4249_RS04765 at 990.246 kb on - strand, within A4249_RS04765 at 990.264 kb on + strand, within A4249_RS04765 at 990.264 kb on + strand, within A4249_RS04765 at 990.265 kb on - strand, within A4249_RS04765 at 990.265 kb on - strand, within A4249_RS04765 at 990.585 kb on + strand, within A4249_RS04765 at 990.585 kb on + strand, within A4249_RS04765 at 990.586 kb on - strand, within A4249_RS04765 at 990.586 kb on - strand, within A4249_RS04765 at 990.586 kb on - strand, within A4249_RS04765 at 990.795 kb on + strand, within A4249_RS04765 at 990.796 kb on - strand, within A4249_RS04765 at 990.796 kb on - strand, within A4249_RS04765 at 990.796 kb on - strand, within A4249_RS04765 at 990.839 kb on - strand, within A4249_RS04765 at 990.934 kb on + strand, within A4249_RS04765 at 991.259 kb on - strand at 991.259 kb on - strand at 991.259 kb on - strand at 991.259 kb on - strand at 991.259 kb on - strand at 991.299 kb on + strand at 991.299 kb on + strand at 991.299 kb on + strand at 991.299 kb on + strand at 991.300 kb on - strand at 991.300 kb on - strand at 991.300 kb on - strand at 992.158 kb on + strand, within A4249_RS04775 at 992.158 kb on + strand, within A4249_RS04775 at 992.158 kb on + strand, within A4249_RS04775 at 992.159 kb on - strand, within A4249_RS04775 at 992.176 kb on + strand, within A4249_RS04775 at 992.176 kb on + strand, within A4249_RS04775 at 992.243 kb on - strand, within A4249_RS04775 at 992.243 kb on - strand, within A4249_RS04775 at 992.243 kb on - strand, within A4249_RS04775
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 988,207 + A4249_RS04755 0.79 -0.7 988,207 + A4249_RS04755 0.79 +0.3 988,207 + A4249_RS04755 0.79 -1.6 988,208 - A4249_RS04755 0.79 -1.6 988,208 - A4249_RS04755 0.79 -0.5 988,252 + A4249_RS04755 0.85 +0.7 988,253 - A4249_RS04755 0.85 +0.2 988,253 - A4249_RS04755 0.85 -0.7 988,253 - A4249_RS04755 0.85 +0.0 988,253 - A4249_RS04755 0.85 +0.8 988,253 - A4249_RS04755 0.85 +0.2 988,321 - -1.6 988,355 + -0.8 988,599 + A4249_RS04760 0.29 +0.8 988,599 + A4249_RS04760 0.29 +0.4 988,599 + A4249_RS04760 0.29 -0.0 988,599 + A4249_RS04760 0.29 +0.9 988,599 + A4249_RS04760 0.29 -0.5 988,599 + A4249_RS04760 0.29 +0.1 988,600 - A4249_RS04760 0.29 -0.2 988,600 - A4249_RS04760 0.29 +0.2 988,600 - A4249_RS04760 0.29 -0.4 988,600 - A4249_RS04760 0.29 -0.4 988,600 - A4249_RS04760 0.29 -0.3 988,600 - A4249_RS04760 0.29 -0.5 988,600 - A4249_RS04760 0.29 -0.2 988,600 - A4249_RS04760 0.29 +0.1 988,728 + A4249_RS04760 0.45 -0.2 988,728 + A4249_RS04760 0.45 -0.8 988,728 + A4249_RS04760 0.45 -0.1 988,728 + A4249_RS04760 0.45 +0.0 988,729 - A4249_RS04760 0.45 +0.6 988,729 - A4249_RS04760 0.45 +0.3 988,729 - A4249_RS04760 0.45 -0.4 988,729 - A4249_RS04760 0.45 -0.1 988,729 - A4249_RS04760 0.45 -0.2 988,729 - A4249_RS04760 0.45 -0.1 988,899 + A4249_RS04760 0.67 -0.1 988,900 - A4249_RS04760 0.67 +0.5 988,983 + A4249_RS04760 0.77 +0.4 988,984 - A4249_RS04760 0.77 -0.4 989,048 - A4249_RS04760 0.86 -0.2 989,048 - A4249_RS04760 0.86 +0.1 989,160 + +0.0 989,196 - -0.7 989,326 - +1.7 989,808 + A4249_RS04765 0.31 +0.5 989,946 + A4249_RS04765 0.38 +0.8 989,946 + A4249_RS04765 0.38 +0.4 989,946 + A4249_RS04765 0.38 -0.3 989,947 - A4249_RS04765 0.38 -1.1 989,947 - A4249_RS04765 0.38 -1.6 990,245 + A4249_RS04765 0.52 -0.8 990,245 + A4249_RS04765 0.52 +0.8 990,246 - A4249_RS04765 0.52 +0.6 990,246 - A4249_RS04765 0.52 -1.0 990,264 + A4249_RS04765 0.53 +0.2 990,264 + A4249_RS04765 0.53 -0.3 990,265 - A4249_RS04765 0.53 -0.8 990,265 - A4249_RS04765 0.53 -0.1 990,585 + A4249_RS04765 0.68 +1.3 990,585 + A4249_RS04765 0.68 -0.6 990,586 - A4249_RS04765 0.68 +0.7 990,586 - A4249_RS04765 0.68 +0.4 990,586 - A4249_RS04765 0.68 -1.0 990,795 + A4249_RS04765 0.78 +0.9 990,796 - A4249_RS04765 0.78 +1.6 990,796 - A4249_RS04765 0.78 +0.7 990,796 - A4249_RS04765 0.78 -0.6 990,839 - A4249_RS04765 0.80 +0.1 990,934 + A4249_RS04765 0.85 +0.9 991,259 - -0.4 991,259 - +0.2 991,259 - -0.2 991,259 - +0.4 991,259 - -0.3 991,299 + +0.0 991,299 + +0.3 991,299 + -0.3 991,299 + -0.2 991,300 - -0.1 991,300 - -0.4 991,300 - -0.0 992,158 + A4249_RS04775 0.12 +0.1 992,158 + A4249_RS04775 0.12 -1.4 992,158 + A4249_RS04775 0.12 -0.1 992,159 - A4249_RS04775 0.12 +0.9 992,176 + A4249_RS04775 0.13 -1.3 992,176 + A4249_RS04775 0.13 -0.2 992,243 - A4249_RS04775 0.15 +0.4 992,243 - A4249_RS04775 0.15 -1.6 992,243 - A4249_RS04775 0.15 -1.7
Or see this region's nucleotide sequence