Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04740 and A4249_RS04745 are separated by 49 nucleotides A4249_RS04745 and A4249_RS04750 overlap by 4 nucleotides A4249_RS04750 and A4249_RS04755 overlap by 1 nucleotides A4249_RS04755 and A4249_RS04760 overlap by 4 nucleotides
A4249_RS04740: A4249_RS04740 - septal ring lytic transglycosylase RlpA family protein, at 985,082 to 985,921
_RS04740
A4249_RS04745: A4249_RS04745 - dTMP kinase, at 985,971 to 986,603
_RS04745
A4249_RS04750: A4249_RS04750 - DNA polymerase III subunit delta', at 986,600 to 987,589
_RS04750
A4249_RS04755: A4249_RS04755 - TatD family hydrolase, at 987,589 to 988,371
_RS04755
A4249_RS04760: A4249_RS04760 - MBL fold metallo-hydrolase, at 988,368 to 989,162
_RS04760
Position (kb) 986
987
988 Strain fitness (log2 ratio) -1
0
1 at 985.608 kb on + strand, within A4249_RS04740 at 985.609 kb on - strand, within A4249_RS04740 at 985.707 kb on + strand, within A4249_RS04740 at 985.890 kb on - strand at 987.762 kb on + strand, within A4249_RS04755 at 987.762 kb on + strand, within A4249_RS04755 at 987.762 kb on + strand, within A4249_RS04755 at 987.762 kb on + strand, within A4249_RS04755 at 987.763 kb on - strand, within A4249_RS04755 at 987.763 kb on - strand, within A4249_RS04755 at 987.973 kb on - strand, within A4249_RS04755 at 988.056 kb on + strand, within A4249_RS04755 at 988.207 kb on + strand, within A4249_RS04755 at 988.207 kb on + strand, within A4249_RS04755 at 988.207 kb on + strand, within A4249_RS04755 at 988.208 kb on - strand, within A4249_RS04755 at 988.208 kb on - strand, within A4249_RS04755 at 988.252 kb on + strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.253 kb on - strand, within A4249_RS04755 at 988.321 kb on - strand at 988.355 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 985,608 + A4249_RS04740 0.63 -0.1 985,609 - A4249_RS04740 0.63 +0.1 985,707 + A4249_RS04740 0.74 +0.3 985,890 - -0.8 987,762 + A4249_RS04755 0.22 -0.0 987,762 + A4249_RS04755 0.22 -0.0 987,762 + A4249_RS04755 0.22 +0.2 987,762 + A4249_RS04755 0.22 +0.1 987,763 - A4249_RS04755 0.22 -1.3 987,763 - A4249_RS04755 0.22 -0.8 987,973 - A4249_RS04755 0.49 +0.3 988,056 + A4249_RS04755 0.60 +0.3 988,207 + A4249_RS04755 0.79 -0.7 988,207 + A4249_RS04755 0.79 +0.3 988,207 + A4249_RS04755 0.79 -1.6 988,208 - A4249_RS04755 0.79 -1.6 988,208 - A4249_RS04755 0.79 -0.5 988,252 + A4249_RS04755 0.85 +0.7 988,253 - A4249_RS04755 0.85 +0.2 988,253 - A4249_RS04755 0.85 -0.7 988,253 - A4249_RS04755 0.85 +0.0 988,253 - A4249_RS04755 0.85 +0.8 988,253 - A4249_RS04755 0.85 +0.2 988,321 - -1.6 988,355 + -0.8
Or see this region's nucleotide sequence