Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04405 and A4249_RS04410 overlap by 2 nucleotides A4249_RS04410 and A4249_RS04415 are separated by 36 nucleotides A4249_RS04415 and A4249_RS04420 overlap by 1 nucleotides
A4249_RS04405: A4249_RS04405 - sterol desaturase family protein, at 912,141 to 912,626
_RS04405
A4249_RS04410: A4249_RS04410 - sterol desaturase family protein, at 912,625 to 913,434
_RS04410
A4249_RS04415: A4249_RS04415 - sigma-54 dependent transcriptional regulator, at 913,471 to 914,802
_RS04415
A4249_RS04420: A4249_RS04420 - ATP-binding protein, at 914,802 to 916,517
_RS04420
Position (kb) 913
914
915 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.547 kb on + strand, within A4249_RS04405 at 912.548 kb on - strand, within A4249_RS04405 at 912.548 kb on - strand, within A4249_RS04405 at 912.548 kb on - strand, within A4249_RS04405 at 912.636 kb on + strand at 912.637 kb on - strand at 912.637 kb on - strand at 912.637 kb on - strand at 912.645 kb on + strand at 912.645 kb on + strand at 912.646 kb on - strand at 912.646 kb on - strand at 912.757 kb on + strand, within A4249_RS04410 at 912.758 kb on - strand, within A4249_RS04410 at 912.892 kb on + strand, within A4249_RS04410 at 912.892 kb on + strand, within A4249_RS04410 at 912.892 kb on + strand, within A4249_RS04410 at 912.893 kb on - strand, within A4249_RS04410 at 912.893 kb on - strand, within A4249_RS04410 at 912.893 kb on - strand, within A4249_RS04410 at 912.893 kb on - strand, within A4249_RS04410 at 912.949 kb on + strand, within A4249_RS04410 at 912.949 kb on + strand, within A4249_RS04410 at 912.950 kb on - strand, within A4249_RS04410 at 912.950 kb on - strand, within A4249_RS04410 at 912.950 kb on - strand, within A4249_RS04410 at 912.950 kb on - strand, within A4249_RS04410 at 912.950 kb on - strand, within A4249_RS04410 at 912.950 kb on - strand, within A4249_RS04410 at 912.958 kb on - strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.003 kb on + strand, within A4249_RS04410 at 913.004 kb on - strand, within A4249_RS04410 at 913.004 kb on - strand, within A4249_RS04410 at 913.004 kb on - strand, within A4249_RS04410 at 913.010 kb on + strand, within A4249_RS04410 at 913.010 kb on + strand, within A4249_RS04410 at 913.011 kb on - strand, within A4249_RS04410 at 913.011 kb on - strand, within A4249_RS04410 at 913.011 kb on - strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.027 kb on + strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.028 kb on - strand, within A4249_RS04410 at 913.030 kb on + strand, within A4249_RS04410 at 913.031 kb on - strand, within A4249_RS04410 at 913.031 kb on - strand, within A4249_RS04410 at 913.031 kb on - strand, within A4249_RS04410 at 913.054 kb on + strand, within A4249_RS04410 at 913.055 kb on - strand, within A4249_RS04410 at 913.191 kb on + strand, within A4249_RS04410 at 913.191 kb on + strand, within A4249_RS04410 at 913.191 kb on + strand, within A4249_RS04410 at 913.191 kb on + strand, within A4249_RS04410 at 913.191 kb on + strand, within A4249_RS04410 at 913.192 kb on - strand, within A4249_RS04410 at 913.192 kb on - strand, within A4249_RS04410 at 913.192 kb on - strand, within A4249_RS04410 at 913.192 kb on - strand, within A4249_RS04410 at 913.192 kb on - strand, within A4249_RS04410 at 913.205 kb on + strand, within A4249_RS04410 at 913.206 kb on - strand, within A4249_RS04410 at 913.360 kb on + strand at 913.360 kb on + strand at 913.360 kb on + strand at 913.360 kb on + strand at 913.360 kb on + strand at 913.360 kb on + strand at 913.360 kb on + strand at 913.360 kb on + strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.361 kb on - strand at 913.369 kb on + strand at 913.369 kb on + strand at 913.369 kb on + strand at 913.369 kb on + strand at 913.370 kb on - strand at 913.370 kb on - strand at 913.492 kb on + strand at 913.492 kb on + strand at 913.492 kb on + strand at 913.518 kb on - strand at 913.561 kb on + strand at 913.561 kb on + strand at 913.561 kb on + strand at 913.562 kb on - strand at 913.562 kb on - strand at 913.562 kb on - strand at 913.562 kb on - strand at 913.582 kb on + strand at 913.582 kb on + strand at 913.582 kb on + strand at 913.582 kb on + strand at 913.750 kb on + strand, within A4249_RS04415 at 913.751 kb on - strand, within A4249_RS04415 at 913.751 kb on - strand, within A4249_RS04415 at 913.762 kb on + strand, within A4249_RS04415 at 913.762 kb on + strand, within A4249_RS04415 at 913.763 kb on - strand, within A4249_RS04415 at 913.764 kb on + strand, within A4249_RS04415 at 913.764 kb on + strand, within A4249_RS04415 at 913.764 kb on + strand, within A4249_RS04415 at 913.764 kb on + strand, within A4249_RS04415 at 913.764 kb on + strand, within A4249_RS04415 at 913.764 kb on + strand, within A4249_RS04415 at 913.765 kb on - strand, within A4249_RS04415 at 913.765 kb on - strand, within A4249_RS04415 at 913.765 kb on - strand, within A4249_RS04415 at 913.765 kb on - strand, within A4249_RS04415 at 913.819 kb on + strand, within A4249_RS04415 at 913.819 kb on + strand, within A4249_RS04415 at 913.819 kb on + strand, within A4249_RS04415 at 913.819 kb on + strand, within A4249_RS04415 at 913.820 kb on - strand, within A4249_RS04415 at 913.830 kb on + strand, within A4249_RS04415 at 913.830 kb on + strand, within A4249_RS04415 at 913.830 kb on + strand, within A4249_RS04415 at 913.830 kb on + strand, within A4249_RS04415 at 913.830 kb on + strand, within A4249_RS04415 at 913.830 kb on + strand, within A4249_RS04415 at 913.831 kb on - strand, within A4249_RS04415 at 913.831 kb on - strand, within A4249_RS04415 at 913.831 kb on - strand, within A4249_RS04415 at 913.831 kb on - strand, within A4249_RS04415 at 913.831 kb on - strand, within A4249_RS04415 at 913.886 kb on + strand, within A4249_RS04415 at 913.886 kb on + strand, within A4249_RS04415 at 913.889 kb on + strand, within A4249_RS04415 at 913.889 kb on + strand, within A4249_RS04415 at 913.889 kb on + strand, within A4249_RS04415 at 913.889 kb on + strand, within A4249_RS04415 at 913.889 kb on + strand, within A4249_RS04415 at 913.890 kb on - strand, within A4249_RS04415 at 913.890 kb on - strand, within A4249_RS04415 at 913.890 kb on - strand, within A4249_RS04415 at 913.890 kb on - strand, within A4249_RS04415 at 913.890 kb on - strand, within A4249_RS04415 at 913.967 kb on - strand, within A4249_RS04415 at 913.967 kb on - strand, within A4249_RS04415 at 913.967 kb on - strand, within A4249_RS04415 at 914.498 kb on + strand, within A4249_RS04415 at 914.498 kb on + strand, within A4249_RS04415 at 914.499 kb on - strand, within A4249_RS04415 at 914.535 kb on + strand, within A4249_RS04415 at 914.711 kb on + strand at 914.711 kb on + strand at 914.711 kb on + strand at 914.813 kb on + strand at 914.814 kb on - strand at 915.211 kb on + strand, within A4249_RS04420 at 915.211 kb on + strand, within A4249_RS04420 at 915.212 kb on - strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.273 kb on + strand, within A4249_RS04420 at 915.274 kb on - strand, within A4249_RS04420 at 915.274 kb on - strand, within A4249_RS04420 at 915.274 kb on - strand, within A4249_RS04420 at 915.274 kb on - strand, within A4249_RS04420 at 915.274 kb on - strand, within A4249_RS04420 at 915.274 kb on - strand, within A4249_RS04420 at 915.554 kb on + strand, within A4249_RS04420
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 912,547 + A4249_RS04405 0.84 +0.4 912,547 + A4249_RS04405 0.84 +0.0 912,547 + A4249_RS04405 0.84 -0.1 912,547 + A4249_RS04405 0.84 +0.2 912,547 + A4249_RS04405 0.84 +0.1 912,547 + A4249_RS04405 0.84 -0.2 912,547 + A4249_RS04405 0.84 -0.5 912,547 + A4249_RS04405 0.84 +0.2 912,547 + A4249_RS04405 0.84 +0.0 912,547 + A4249_RS04405 0.84 +2.8 912,547 + A4249_RS04405 0.84 +0.0 912,547 + A4249_RS04405 0.84 -0.8 912,548 - A4249_RS04405 0.84 +0.1 912,548 - A4249_RS04405 0.84 -1.0 912,548 - A4249_RS04405 0.84 -0.5 912,636 + -0.4 912,637 - -0.8 912,637 - -1.3 912,637 - -0.0 912,645 + -0.1 912,645 + -0.1 912,646 - -0.5 912,646 - -0.6 912,757 + A4249_RS04410 0.16 +1.3 912,758 - A4249_RS04410 0.16 -0.2 912,892 + A4249_RS04410 0.33 -2.3 912,892 + A4249_RS04410 0.33 -0.6 912,892 + A4249_RS04410 0.33 -0.1 912,893 - A4249_RS04410 0.33 +0.1 912,893 - A4249_RS04410 0.33 -0.3 912,893 - A4249_RS04410 0.33 +2.0 912,893 - A4249_RS04410 0.33 +0.7 912,949 + A4249_RS04410 0.40 -0.2 912,949 + A4249_RS04410 0.40 +0.4 912,950 - A4249_RS04410 0.40 -0.8 912,950 - A4249_RS04410 0.40 +0.0 912,950 - A4249_RS04410 0.40 +0.4 912,950 - A4249_RS04410 0.40 -3.0 912,950 - A4249_RS04410 0.40 +0.7 912,950 - A4249_RS04410 0.40 -1.1 912,958 - A4249_RS04410 0.41 +0.4 913,003 + A4249_RS04410 0.47 +0.1 913,003 + A4249_RS04410 0.47 +0.2 913,003 + A4249_RS04410 0.47 +0.2 913,003 + A4249_RS04410 0.47 +0.1 913,003 + A4249_RS04410 0.47 +0.9 913,003 + A4249_RS04410 0.47 -0.4 913,003 + A4249_RS04410 0.47 +0.4 913,003 + A4249_RS04410 0.47 -2.0 913,004 - A4249_RS04410 0.47 -1.9 913,004 - A4249_RS04410 0.47 +0.6 913,004 - A4249_RS04410 0.47 +0.3 913,010 + A4249_RS04410 0.48 +0.5 913,010 + A4249_RS04410 0.48 -0.7 913,011 - A4249_RS04410 0.48 +0.5 913,011 - A4249_RS04410 0.48 +0.6 913,011 - A4249_RS04410 0.48 +0.6 913,027 + A4249_RS04410 0.50 -0.0 913,027 + A4249_RS04410 0.50 -0.7 913,027 + A4249_RS04410 0.50 -0.9 913,027 + A4249_RS04410 0.50 +0.6 913,027 + A4249_RS04410 0.50 -0.2 913,027 + A4249_RS04410 0.50 +0.3 913,027 + A4249_RS04410 0.50 -0.3 913,027 + A4249_RS04410 0.50 -0.7 913,027 + A4249_RS04410 0.50 -0.1 913,027 + A4249_RS04410 0.50 -0.9 913,027 + A4249_RS04410 0.50 -0.7 913,027 + A4249_RS04410 0.50 -1.0 913,028 - A4249_RS04410 0.50 +0.5 913,028 - A4249_RS04410 0.50 -0.2 913,028 - A4249_RS04410 0.50 +1.0 913,028 - A4249_RS04410 0.50 +0.2 913,028 - A4249_RS04410 0.50 -0.6 913,028 - A4249_RS04410 0.50 -0.5 913,028 - A4249_RS04410 0.50 -1.0 913,028 - A4249_RS04410 0.50 -0.1 913,028 - A4249_RS04410 0.50 +0.2 913,028 - A4249_RS04410 0.50 -1.6 913,028 - A4249_RS04410 0.50 +0.6 913,028 - A4249_RS04410 0.50 +0.2 913,030 + A4249_RS04410 0.50 +0.2 913,031 - A4249_RS04410 0.50 +1.3 913,031 - A4249_RS04410 0.50 -0.3 913,031 - A4249_RS04410 0.50 -0.2 913,054 + A4249_RS04410 0.53 -0.8 913,055 - A4249_RS04410 0.53 -0.8 913,191 + A4249_RS04410 0.70 +0.1 913,191 + A4249_RS04410 0.70 -0.5 913,191 + A4249_RS04410 0.70 +1.0 913,191 + A4249_RS04410 0.70 -0.0 913,191 + A4249_RS04410 0.70 +0.1 913,192 - A4249_RS04410 0.70 -0.9 913,192 - A4249_RS04410 0.70 +0.2 913,192 - A4249_RS04410 0.70 -1.7 913,192 - A4249_RS04410 0.70 -0.5 913,192 - A4249_RS04410 0.70 +0.1 913,205 + A4249_RS04410 0.72 +0.2 913,206 - A4249_RS04410 0.72 +0.6 913,360 + -0.7 913,360 + +1.0 913,360 + -0.5 913,360 + -0.9 913,360 + -0.1 913,360 + -0.4 913,360 + +0.0 913,360 + -0.8 913,361 - +0.6 913,361 - +0.0 913,361 - +0.3 913,361 - +0.2 913,361 - -0.1 913,361 - +1.4 913,361 - +0.8 913,361 - -0.8 913,369 + +0.5 913,369 + +0.6 913,369 + -0.0 913,369 + -0.4 913,370 - +0.2 913,370 - -0.7 913,492 + -0.1 913,492 + -0.9 913,492 + +0.9 913,518 - -0.2 913,561 + -0.6 913,561 + -0.1 913,561 + -0.7 913,562 - -1.1 913,562 - +0.8 913,562 - -0.5 913,562 - +0.5 913,582 + +0.2 913,582 + -1.8 913,582 + +0.5 913,582 + -0.3 913,750 + A4249_RS04415 0.21 -1.0 913,751 - A4249_RS04415 0.21 -0.3 913,751 - A4249_RS04415 0.21 -0.1 913,762 + A4249_RS04415 0.22 +0.9 913,762 + A4249_RS04415 0.22 +0.0 913,763 - A4249_RS04415 0.22 +0.3 913,764 + A4249_RS04415 0.22 -0.4 913,764 + A4249_RS04415 0.22 -0.4 913,764 + A4249_RS04415 0.22 -1.0 913,764 + A4249_RS04415 0.22 -0.2 913,764 + A4249_RS04415 0.22 -0.6 913,764 + A4249_RS04415 0.22 -2.0 913,765 - A4249_RS04415 0.22 -1.2 913,765 - A4249_RS04415 0.22 -0.2 913,765 - A4249_RS04415 0.22 +0.6 913,765 - A4249_RS04415 0.22 +0.4 913,819 + A4249_RS04415 0.26 +0.2 913,819 + A4249_RS04415 0.26 -0.6 913,819 + A4249_RS04415 0.26 -0.1 913,819 + A4249_RS04415 0.26 +0.6 913,820 - A4249_RS04415 0.26 -0.4 913,830 + A4249_RS04415 0.27 -0.1 913,830 + A4249_RS04415 0.27 -0.3 913,830 + A4249_RS04415 0.27 +0.2 913,830 + A4249_RS04415 0.27 +0.1 913,830 + A4249_RS04415 0.27 -0.3 913,830 + A4249_RS04415 0.27 +0.3 913,831 - A4249_RS04415 0.27 +0.0 913,831 - A4249_RS04415 0.27 -2.7 913,831 - A4249_RS04415 0.27 -0.8 913,831 - A4249_RS04415 0.27 +0.2 913,831 - A4249_RS04415 0.27 -0.8 913,886 + A4249_RS04415 0.31 -0.4 913,886 + A4249_RS04415 0.31 -1.5 913,889 + A4249_RS04415 0.31 +0.8 913,889 + A4249_RS04415 0.31 -1.2 913,889 + A4249_RS04415 0.31 -1.8 913,889 + A4249_RS04415 0.31 -0.4 913,889 + A4249_RS04415 0.31 +0.3 913,890 - A4249_RS04415 0.31 +0.3 913,890 - A4249_RS04415 0.31 +0.2 913,890 - A4249_RS04415 0.31 -0.2 913,890 - A4249_RS04415 0.31 -0.9 913,890 - A4249_RS04415 0.31 -0.4 913,967 - A4249_RS04415 0.37 +0.8 913,967 - A4249_RS04415 0.37 -0.5 913,967 - A4249_RS04415 0.37 +0.6 914,498 + A4249_RS04415 0.77 +0.7 914,498 + A4249_RS04415 0.77 -1.3 914,499 - A4249_RS04415 0.77 -0.3 914,535 + A4249_RS04415 0.80 -0.9 914,711 + +0.1 914,711 + -0.8 914,711 + +0.0 914,813 + -1.4 914,814 - +0.7 915,211 + A4249_RS04420 0.24 +0.7 915,211 + A4249_RS04420 0.24 -0.6 915,212 - A4249_RS04420 0.24 -2.0 915,273 + A4249_RS04420 0.27 +0.1 915,273 + A4249_RS04420 0.27 +0.1 915,273 + A4249_RS04420 0.27 -1.7 915,273 + A4249_RS04420 0.27 -0.8 915,273 + A4249_RS04420 0.27 -0.5 915,273 + A4249_RS04420 0.27 +0.3 915,273 + A4249_RS04420 0.27 -0.9 915,273 + A4249_RS04420 0.27 +0.6 915,273 + A4249_RS04420 0.27 -1.1 915,273 + A4249_RS04420 0.27 -0.2 915,274 - A4249_RS04420 0.28 -0.5 915,274 - A4249_RS04420 0.28 +0.7 915,274 - A4249_RS04420 0.28 +0.7 915,274 - A4249_RS04420 0.28 -2.0 915,274 - A4249_RS04420 0.28 -0.7 915,274 - A4249_RS04420 0.28 -0.1 915,554 + A4249_RS04420 0.44 -0.4
Or see this region's nucleotide sequence