Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03570

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03565 and A4249_RS03570 are separated by 123 nucleotidesA4249_RS03570 and A4249_RS03575 are separated by 110 nucleotides A4249_RS03565: A4249_RS03565 - sorbosone dehydrogenase family protein, at 748,095 to 749,402 _RS03565 A4249_RS03570: A4249_RS03570 - TonB family protein, at 749,526 to 749,867 _RS03570 A4249_RS03575: A4249_RS03575 - LysR family transcriptional regulator, at 749,978 to 750,853 _RS03575 Position (kb) 749 750Strain fitness (log2 ratio) -2 -1 0 1at 748.537 kb on + strand, within A4249_RS03565at 748.537 kb on + strand, within A4249_RS03565at 748.538 kb on - strand, within A4249_RS03565at 748.538 kb on - strand, within A4249_RS03565at 748.541 kb on + strand, within A4249_RS03565at 748.541 kb on + strand, within A4249_RS03565at 748.541 kb on + strand, within A4249_RS03565at 748.541 kb on + strand, within A4249_RS03565at 748.541 kb on + strand, within A4249_RS03565at 748.541 kb on + strand, within A4249_RS03565at 748.542 kb on - strand, within A4249_RS03565at 748.542 kb on - strand, within A4249_RS03565at 748.542 kb on - strand, within A4249_RS03565at 748.569 kb on + strand, within A4249_RS03565at 748.569 kb on + strand, within A4249_RS03565at 748.570 kb on - strand, within A4249_RS03565at 748.570 kb on - strand, within A4249_RS03565at 748.581 kb on + strand, within A4249_RS03565at 748.581 kb on + strand, within A4249_RS03565at 748.581 kb on + strand, within A4249_RS03565at 748.581 kb on + strand, within A4249_RS03565at 748.582 kb on - strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.587 kb on + strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.588 kb on - strand, within A4249_RS03565at 748.739 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.740 kb on + strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.741 kb on - strand, within A4249_RS03565at 748.959 kb on + strand, within A4249_RS03565at 748.959 kb on + strand, within A4249_RS03565at 748.960 kb on - strand, within A4249_RS03565at 748.972 kb on + strand, within A4249_RS03565at 748.973 kb on - strand, within A4249_RS03565at 748.973 kb on - strand, within A4249_RS03565at 748.973 kb on - strand, within A4249_RS03565at 748.989 kb on + strand, within A4249_RS03565at 748.989 kb on + strand, within A4249_RS03565at 748.989 kb on + strand, within A4249_RS03565at 748.990 kb on - strand, within A4249_RS03565at 748.990 kb on - strand, within A4249_RS03565at 748.990 kb on - strand, within A4249_RS03565at 748.990 kb on - strand, within A4249_RS03565at 749.001 kb on + strand, within A4249_RS03565at 749.001 kb on + strand, within A4249_RS03565at 749.002 kb on - strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.007 kb on + strand, within A4249_RS03565at 749.008 kb on - strand, within A4249_RS03565at 749.008 kb on - strand, within A4249_RS03565at 749.008 kb on - strand, within A4249_RS03565at 749.008 kb on - strand, within A4249_RS03565at 749.008 kb on - strand, within A4249_RS03565at 749.089 kb on + strand, within A4249_RS03565at 749.089 kb on + strand, within A4249_RS03565at 749.090 kb on - strand, within A4249_RS03565at 749.090 kb on - strand, within A4249_RS03565at 749.090 kb on - strand, within A4249_RS03565at 749.090 kb on - strand, within A4249_RS03565at 749.211 kb on + strand, within A4249_RS03565at 749.211 kb on + strand, within A4249_RS03565at 749.212 kb on - strand, within A4249_RS03565at 749.212 kb on - strand, within A4249_RS03565at 749.401 kb on - strandat 749.443 kb on + strandat 749.443 kb on + strandat 749.443 kb on + strandat 749.443 kb on + strandat 749.443 kb on + strandat 749.443 kb on + strandat 749.444 kb on - strandat 749.444 kb on - strandat 749.459 kb on + strandat 749.459 kb on + strandat 749.459 kb on + strandat 749.459 kb on + strandat 749.460 kb on - strandat 749.467 kb on + strandat 749.467 kb on + strandat 749.507 kb on + strandat 749.507 kb on + strandat 749.507 kb on + strandat 749.507 kb on + strandat 749.508 kb on - strandat 749.508 kb on - strandat 749.508 kb on - strandat 749.508 kb on - strandat 749.516 kb on + strandat 749.516 kb on + strandat 749.516 kb on + strandat 749.516 kb on + strandat 749.516 kb on + strandat 749.516 kb on + strandat 749.517 kb on - strandat 749.517 kb on - strandat 749.517 kb on - strandat 749.517 kb on - strandat 749.517 kb on - strandat 749.517 kb on - strandat 749.709 kb on + strand, within A4249_RS03570at 749.710 kb on - strand, within A4249_RS03570at 749.710 kb on - strand, within A4249_RS03570at 749.710 kb on - strand, within A4249_RS03570at 749.785 kb on + strand, within A4249_RS03570at 749.786 kb on - strand, within A4249_RS03570at 749.786 kb on - strand, within A4249_RS03570at 749.888 kb on + strandat 749.888 kb on + strandat 750.249 kb on + strand, within A4249_RS03575at 750.249 kb on + strand, within A4249_RS03575at 750.249 kb on + strand, within A4249_RS03575at 750.250 kb on - strand, within A4249_RS03575at 750.267 kb on + strand, within A4249_RS03575at 750.267 kb on + strand, within A4249_RS03575at 750.267 kb on + strand, within A4249_RS03575at 750.267 kb on + strand, within A4249_RS03575at 750.268 kb on - strand, within A4249_RS03575at 750.268 kb on - strand, within A4249_RS03575at 750.284 kb on - strand, within A4249_RS03575at 750.285 kb on + strand, within A4249_RS03575at 750.285 kb on + strand, within A4249_RS03575at 750.285 kb on + strand, within A4249_RS03575at 750.286 kb on - strand, within A4249_RS03575at 750.364 kb on - strand, within A4249_RS03575at 750.364 kb on - strand, within A4249_RS03575at 750.440 kb on - strand, within A4249_RS03575at 750.849 kb on + strandat 750.849 kb on + strandat 750.849 kb on + strandat 750.849 kb on + strandat 750.849 kb on + strandat 750.850 kb on - strandat 750.850 kb on - strandat 750.860 kb on + strandat 750.861 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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748,537 + A4249_RS03565 0.34 -0.0
748,537 + A4249_RS03565 0.34 +1.3
748,538 - A4249_RS03565 0.34 -1.2
748,538 - A4249_RS03565 0.34 -0.3
748,541 + A4249_RS03565 0.34 +0.0
748,541 + A4249_RS03565 0.34 +0.6
748,541 + A4249_RS03565 0.34 +0.7
748,541 + A4249_RS03565 0.34 -0.7
748,541 + A4249_RS03565 0.34 +0.5
748,541 + A4249_RS03565 0.34 +0.3
748,542 - A4249_RS03565 0.34 -0.6
748,542 - A4249_RS03565 0.34 -0.3
748,542 - A4249_RS03565 0.34 -0.5
748,569 + A4249_RS03565 0.36 -0.3
748,569 + A4249_RS03565 0.36 -0.7
748,570 - A4249_RS03565 0.36 +0.3
748,570 - A4249_RS03565 0.36 -0.4
748,581 + A4249_RS03565 0.37 +0.7
748,581 + A4249_RS03565 0.37 -0.6
748,581 + A4249_RS03565 0.37 -0.5
748,581 + A4249_RS03565 0.37 +0.9
748,582 - A4249_RS03565 0.37 +0.4
748,587 + A4249_RS03565 0.38 +0.3
748,587 + A4249_RS03565 0.38 +0.1
748,587 + A4249_RS03565 0.38 +0.5
748,587 + A4249_RS03565 0.38 +0.5
748,587 + A4249_RS03565 0.38 +0.7
748,587 + A4249_RS03565 0.38 -0.3
748,587 + A4249_RS03565 0.38 -0.7
748,587 + A4249_RS03565 0.38 +0.4
748,587 + A4249_RS03565 0.38 -0.8
748,587 + A4249_RS03565 0.38 +0.2
748,587 + A4249_RS03565 0.38 -0.4
748,587 + A4249_RS03565 0.38 +0.6
748,587 + A4249_RS03565 0.38 +0.2
748,587 + A4249_RS03565 0.38 -1.8
748,587 + A4249_RS03565 0.38 -1.0
748,588 - A4249_RS03565 0.38 +0.5
748,588 - A4249_RS03565 0.38 +0.9
748,588 - A4249_RS03565 0.38 +0.8
748,588 - A4249_RS03565 0.38 +0.2
748,588 - A4249_RS03565 0.38 -1.6
748,588 - A4249_RS03565 0.38 +0.2
748,588 - A4249_RS03565 0.38 +0.4
748,588 - A4249_RS03565 0.38 +0.2
748,588 - A4249_RS03565 0.38 -0.9
748,588 - A4249_RS03565 0.38 +0.0
748,588 - A4249_RS03565 0.38 -0.3
748,588 - A4249_RS03565 0.38 -1.1
748,739 + A4249_RS03565 0.49 +0.4
748,740 + A4249_RS03565 0.49 -0.8
748,740 + A4249_RS03565 0.49 -0.3
748,740 + A4249_RS03565 0.49 +0.6
748,740 + A4249_RS03565 0.49 +0.3
748,740 + A4249_RS03565 0.49 -1.3
748,740 + A4249_RS03565 0.49 +0.8
748,740 + A4249_RS03565 0.49 +0.8
748,740 + A4249_RS03565 0.49 +0.4
748,740 + A4249_RS03565 0.49 +0.2
748,740 + A4249_RS03565 0.49 +0.3
748,740 + A4249_RS03565 0.49 +0.0
748,740 + A4249_RS03565 0.49 +0.4
748,740 + A4249_RS03565 0.49 +0.4
748,740 + A4249_RS03565 0.49 -0.6
748,740 + A4249_RS03565 0.49 +0.1
748,740 + A4249_RS03565 0.49 +0.3
748,740 + A4249_RS03565 0.49 +0.1
748,741 - A4249_RS03565 0.49 -1.4
748,741 - A4249_RS03565 0.49 +0.7
748,741 - A4249_RS03565 0.49 +0.2
748,741 - A4249_RS03565 0.49 -0.4
748,741 - A4249_RS03565 0.49 -0.3
748,741 - A4249_RS03565 0.49 -0.0
748,741 - A4249_RS03565 0.49 +0.5
748,959 + A4249_RS03565 0.66 -1.0
748,959 + A4249_RS03565 0.66 -0.1
748,960 - A4249_RS03565 0.66 -1.1
748,972 + A4249_RS03565 0.67 +0.5
748,973 - A4249_RS03565 0.67 -0.3
748,973 - A4249_RS03565 0.67 -0.2
748,973 - A4249_RS03565 0.67 +0.2
748,989 + A4249_RS03565 0.68 +0.2
748,989 + A4249_RS03565 0.68 +0.1
748,989 + A4249_RS03565 0.68 +0.6
748,990 - A4249_RS03565 0.68 -2.1
748,990 - A4249_RS03565 0.68 -0.3
748,990 - A4249_RS03565 0.68 +1.0
748,990 - A4249_RS03565 0.68 +0.8
749,001 + A4249_RS03565 0.69 +0.7
749,001 + A4249_RS03565 0.69 -0.2
749,002 - A4249_RS03565 0.69 +1.0
749,007 + A4249_RS03565 0.70 -0.0
749,007 + A4249_RS03565 0.70 -0.6
749,007 + A4249_RS03565 0.70 +0.2
749,007 + A4249_RS03565 0.70 -0.2
749,007 + A4249_RS03565 0.70 +0.3
749,007 + A4249_RS03565 0.70 -1.3
749,007 + A4249_RS03565 0.70 +0.0
749,007 + A4249_RS03565 0.70 -1.2
749,008 - A4249_RS03565 0.70 +0.5
749,008 - A4249_RS03565 0.70 +0.3
749,008 - A4249_RS03565 0.70 -0.3
749,008 - A4249_RS03565 0.70 -0.3
749,008 - A4249_RS03565 0.70 +1.4
749,089 + A4249_RS03565 0.76 +0.0
749,089 + A4249_RS03565 0.76 -0.6
749,090 - A4249_RS03565 0.76 -0.7
749,090 - A4249_RS03565 0.76 -0.8
749,090 - A4249_RS03565 0.76 -0.9
749,090 - A4249_RS03565 0.76 -1.5
749,211 + A4249_RS03565 0.85 -0.1
749,211 + A4249_RS03565 0.85 -0.1
749,212 - A4249_RS03565 0.85 -1.1
749,212 - A4249_RS03565 0.85 +1.5
749,401 - +0.5
749,443 + +1.1
749,443 + -0.9
749,443 + -0.0
749,443 + -0.3
749,443 + -0.3
749,443 + +1.1
749,444 - -0.5
749,444 - -0.0
749,459 + +0.7
749,459 + -0.5
749,459 + -0.8
749,459 + -0.4
749,460 - -1.4
749,467 + +0.6
749,467 + -0.8
749,507 + +0.5
749,507 + +0.9
749,507 + +0.6
749,507 + +0.6
749,508 - +0.6
749,508 - -0.2
749,508 - +0.1
749,508 - -1.1
749,516 + +0.4
749,516 + +0.3
749,516 + -0.5
749,516 + -1.7
749,516 + -0.2
749,516 + -1.1
749,517 - -0.8
749,517 - -0.3
749,517 - -1.6
749,517 - +0.1
749,517 - +0.1
749,517 - -0.7
749,709 + A4249_RS03570 0.54 +0.1
749,710 - A4249_RS03570 0.54 -0.5
749,710 - A4249_RS03570 0.54 +0.6
749,710 - A4249_RS03570 0.54 -1.4
749,785 + A4249_RS03570 0.76 +0.3
749,786 - A4249_RS03570 0.76 -0.1
749,786 - A4249_RS03570 0.76 -1.6
749,888 + +0.1
749,888 + -1.3
750,249 + A4249_RS03575 0.31 -0.8
750,249 + A4249_RS03575 0.31 -0.4
750,249 + A4249_RS03575 0.31 -0.7
750,250 - A4249_RS03575 0.31 -0.2
750,267 + A4249_RS03575 0.33 +0.3
750,267 + A4249_RS03575 0.33 +0.4
750,267 + A4249_RS03575 0.33 +0.3
750,267 + A4249_RS03575 0.33 +0.8
750,268 - A4249_RS03575 0.33 -1.3
750,268 - A4249_RS03575 0.33 +0.5
750,284 - A4249_RS03575 0.35 +0.1
750,285 + A4249_RS03575 0.35 -1.4
750,285 + A4249_RS03575 0.35 -1.5
750,285 + A4249_RS03575 0.35 -0.4
750,286 - A4249_RS03575 0.35 +1.4
750,364 - A4249_RS03575 0.44 -0.9
750,364 - A4249_RS03575 0.44 +0.3
750,440 - A4249_RS03575 0.53 +0.6
750,849 + -0.6
750,849 + +1.7
750,849 + +0.2
750,849 + -0.6
750,849 + +0.4
750,850 - -0.4
750,850 - +0.4
750,860 + -1.0
750,861 - -1.1

Or see this region's nucleotide sequence