Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02975

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02965 and A4249_RS02970 are separated by 11 nucleotidesA4249_RS02970 and A4249_RS02975 are separated by 103 nucleotidesA4249_RS02975 and A4249_RS02980 overlap by 17 nucleotides A4249_RS02965: A4249_RS02965 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 628,494 to 629,519 _RS02965 A4249_RS02970: A4249_RS02970 - DUF2177 family protein, at 629,531 to 629,944 _RS02970 A4249_RS02975: A4249_RS02975 - oligosaccharide flippase family protein, at 630,048 to 631,298 _RS02975 A4249_RS02980: A4249_RS02980 - UDP-galactopyranose mutase, at 631,282 to 632,430 _RS02980 Position (kb) 630 631 632Strain fitness (log2 ratio) -3 -2 -1 0 1at 629.078 kb on + strand, within A4249_RS02965at 629.078 kb on + strand, within A4249_RS02965at 629.078 kb on + strand, within A4249_RS02965at 629.078 kb on + strand, within A4249_RS02965at 629.078 kb on + strand, within A4249_RS02965at 629.079 kb on - strand, within A4249_RS02965at 629.079 kb on - strand, within A4249_RS02965at 629.079 kb on - strand, within A4249_RS02965at 629.190 kb on - strand, within A4249_RS02965at 629.190 kb on - strand, within A4249_RS02965at 629.190 kb on - strand, within A4249_RS02965at 629.190 kb on - strand, within A4249_RS02965at 629.317 kb on - strand, within A4249_RS02965at 629.317 kb on - strand, within A4249_RS02965at 629.317 kb on - strand, within A4249_RS02965at 629.394 kb on + strand, within A4249_RS02965at 629.394 kb on + strand, within A4249_RS02965at 629.394 kb on + strand, within A4249_RS02965at 629.395 kb on - strand, within A4249_RS02965at 629.395 kb on - strand, within A4249_RS02965at 629.395 kb on - strand, within A4249_RS02965at 629.395 kb on - strand, within A4249_RS02965at 629.395 kb on - strand, within A4249_RS02965at 629.395 kb on - strand, within A4249_RS02965at 629.439 kb on + strandat 629.439 kb on + strandat 629.439 kb on + strandat 629.439 kb on + strandat 629.440 kb on - strandat 629.440 kb on - strandat 629.440 kb on - strandat 629.540 kb on + strandat 629.540 kb on + strandat 629.540 kb on + strandat 629.540 kb on + strandat 629.540 kb on + strandat 629.540 kb on + strandat 629.540 kb on + strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.541 kb on - strandat 629.553 kb on - strandat 629.553 kb on - strandat 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.621 kb on + strand, within A4249_RS02970at 629.622 kb on - strand, within A4249_RS02970at 629.622 kb on - strand, within A4249_RS02970at 629.622 kb on - strand, within A4249_RS02970at 629.622 kb on - strand, within A4249_RS02970at 629.622 kb on - strand, within A4249_RS02970at 629.623 kb on + strand, within A4249_RS02970at 629.623 kb on + strand, within A4249_RS02970at 629.623 kb on + strand, within A4249_RS02970at 629.623 kb on + strand, within A4249_RS02970at 629.623 kb on + strand, within A4249_RS02970at 629.623 kb on + strand, within A4249_RS02970at 629.624 kb on - strand, within A4249_RS02970at 629.624 kb on - strand, within A4249_RS02970at 629.624 kb on - strand, within A4249_RS02970at 629.624 kb on - strand, within A4249_RS02970at 629.624 kb on - strand, within A4249_RS02970at 629.624 kb on - strand, within A4249_RS02970at 629.684 kb on + strand, within A4249_RS02970at 629.684 kb on + strand, within A4249_RS02970at 629.684 kb on + strand, within A4249_RS02970at 629.684 kb on + strand, within A4249_RS02970at 629.684 kb on + strand, within A4249_RS02970at 629.685 kb on - strand, within A4249_RS02970at 629.685 kb on - strand, within A4249_RS02970at 629.685 kb on - strand, within A4249_RS02970at 629.716 kb on - strand, within A4249_RS02970at 629.716 kb on - strand, within A4249_RS02970at 629.792 kb on + strand, within A4249_RS02970at 629.792 kb on + strand, within A4249_RS02970at 629.801 kb on + strand, within A4249_RS02970at 629.801 kb on + strand, within A4249_RS02970at 629.801 kb on + strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 629.802 kb on - strand, within A4249_RS02970at 630.084 kb on + strandat 630.084 kb on + strandat 630.085 kb on - strandat 630.085 kb on - strandat 630.105 kb on + strandat 630.105 kb on + strandat 630.106 kb on - strandat 630.106 kb on - strandat 630.106 kb on - strandat 630.170 kb on - strandat 630.170 kb on - strandat 630.705 kb on + strand, within A4249_RS02975at 630.706 kb on - strand, within A4249_RS02975at 630.707 kb on + strand, within A4249_RS02975at 630.707 kb on + strand, within A4249_RS02975at 631.295 kb on - strandat 631.454 kb on - strand, within A4249_RS02980at 631.488 kb on + strand, within A4249_RS02980at 631.488 kb on + strand, within A4249_RS02980at 631.489 kb on - strand, within A4249_RS02980at 631.489 kb on - strand, within A4249_RS02980at 631.489 kb on - strand, within A4249_RS02980at 631.498 kb on + strand, within A4249_RS02980at 631.498 kb on + strand, within A4249_RS02980at 631.498 kb on + strand, within A4249_RS02980at 631.498 kb on + strand, within A4249_RS02980at 631.499 kb on - strand, within A4249_RS02980at 631.499 kb on - strand, within A4249_RS02980at 631.499 kb on - strand, within A4249_RS02980at 631.499 kb on - strand, within A4249_RS02980at 631.499 kb on - strand, within A4249_RS02980at 631.528 kb on + strand, within A4249_RS02980at 631.528 kb on + strand, within A4249_RS02980at 631.528 kb on + strand, within A4249_RS02980at 631.528 kb on + strand, within A4249_RS02980at 631.529 kb on - strand, within A4249_RS02980at 631.529 kb on - strand, within A4249_RS02980at 631.529 kb on - strand, within A4249_RS02980at 631.715 kb on + strand, within A4249_RS02980at 631.715 kb on + strand, within A4249_RS02980at 631.716 kb on - strand, within A4249_RS02980at 631.716 kb on - strand, within A4249_RS02980at 631.732 kb on + strand, within A4249_RS02980at 631.732 kb on + strand, within A4249_RS02980at 631.732 kb on + strand, within A4249_RS02980at 631.732 kb on + strand, within A4249_RS02980at 631.732 kb on + strand, within A4249_RS02980at 631.732 kb on + strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.733 kb on - strand, within A4249_RS02980at 631.759 kb on + strand, within A4249_RS02980at 631.759 kb on + strand, within A4249_RS02980at 631.760 kb on - strand, within A4249_RS02980at 631.849 kb on + strand, within A4249_RS02980at 631.849 kb on + strand, within A4249_RS02980at 631.850 kb on - strand, within A4249_RS02980at 631.850 kb on - strand, within A4249_RS02980at 631.850 kb on - strand, within A4249_RS02980at 631.850 kb on - strand, within A4249_RS02980at 631.929 kb on + strand, within A4249_RS02980at 631.929 kb on + strand, within A4249_RS02980at 631.929 kb on + strand, within A4249_RS02980at 631.930 kb on - strand, within A4249_RS02980at 631.930 kb on - strand, within A4249_RS02980at 631.990 kb on + strand, within A4249_RS02980at 631.990 kb on + strand, within A4249_RS02980at 631.990 kb on + strand, within A4249_RS02980at 631.990 kb on + strand, within A4249_RS02980at 631.991 kb on - strand, within A4249_RS02980at 631.991 kb on - strand, within A4249_RS02980at 631.991 kb on - strand, within A4249_RS02980at 631.991 kb on - strand, within A4249_RS02980at 632.011 kb on + strand, within A4249_RS02980at 632.011 kb on + strand, within A4249_RS02980at 632.011 kb on + strand, within A4249_RS02980at 632.011 kb on + strand, within A4249_RS02980at 632.011 kb on + strand, within A4249_RS02980at 632.012 kb on - strand, within A4249_RS02980at 632.012 kb on - strand, within A4249_RS02980at 632.046 kb on + strand, within A4249_RS02980at 632.046 kb on + strand, within A4249_RS02980at 632.046 kb on + strand, within A4249_RS02980at 632.046 kb on + strand, within A4249_RS02980at 632.046 kb on + strand, within A4249_RS02980at 632.047 kb on - strand, within A4249_RS02980at 632.047 kb on - strand, within A4249_RS02980at 632.047 kb on - strand, within A4249_RS02980at 632.047 kb on - strand, within A4249_RS02980at 632.047 kb on - strand, within A4249_RS02980at 632.110 kb on + strand, within A4249_RS02980at 632.110 kb on + strand, within A4249_RS02980at 632.111 kb on - strand, within A4249_RS02980at 632.111 kb on - strand, within A4249_RS02980at 632.209 kb on + strand, within A4249_RS02980at 632.209 kb on + strand, within A4249_RS02980at 632.209 kb on + strand, within A4249_RS02980at 632.209 kb on + strand, within A4249_RS02980at 632.209 kb on + strand, within A4249_RS02980at 632.210 kb on - strand, within A4249_RS02980at 632.210 kb on - strand, within A4249_RS02980at 632.210 kb on - strand, within A4249_RS02980at 632.210 kb on - strand, within A4249_RS02980at 632.233 kb on + strand, within A4249_RS02980at 632.233 kb on + strand, within A4249_RS02980at 632.234 kb on - strand, within A4249_RS02980at 632.236 kb on + strand, within A4249_RS02980at 632.237 kb on - strand, within A4249_RS02980at 632.237 kb on - strand, within A4249_RS02980at 632.279 kb on - strand, within A4249_RS02980

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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629,078 + A4249_RS02965 0.57 -0.9
629,078 + A4249_RS02965 0.57 -1.0
629,078 + A4249_RS02965 0.57 +0.7
629,078 + A4249_RS02965 0.57 -0.3
629,078 + A4249_RS02965 0.57 -0.8
629,079 - A4249_RS02965 0.57 -0.2
629,079 - A4249_RS02965 0.57 -1.0
629,079 - A4249_RS02965 0.57 -0.6
629,190 - A4249_RS02965 0.68 +0.0
629,190 - A4249_RS02965 0.68 -0.3
629,190 - A4249_RS02965 0.68 +0.2
629,190 - A4249_RS02965 0.68 +0.2
629,317 - A4249_RS02965 0.80 -0.6
629,317 - A4249_RS02965 0.80 +0.4
629,317 - A4249_RS02965 0.80 -0.3
629,394 + A4249_RS02965 0.88 -0.0
629,394 + A4249_RS02965 0.88 +0.2
629,394 + A4249_RS02965 0.88 +0.9
629,395 - A4249_RS02965 0.88 -0.2
629,395 - A4249_RS02965 0.88 -1.3
629,395 - A4249_RS02965 0.88 -0.6
629,395 - A4249_RS02965 0.88 +0.9
629,395 - A4249_RS02965 0.88 -0.6
629,395 - A4249_RS02965 0.88 +0.2
629,439 + +0.4
629,439 + -1.5
629,439 + -0.5
629,439 + +0.5
629,440 - -0.2
629,440 - -0.2
629,440 - -0.9
629,540 + +0.6
629,540 + -0.9
629,540 + +0.0
629,540 + +0.6
629,540 + +0.6
629,540 + -0.3
629,540 + +0.7
629,541 - -0.5
629,541 - +1.0
629,541 - -0.0
629,541 - +0.9
629,541 - +1.4
629,541 - -0.2
629,541 - +0.8
629,541 - -0.6
629,553 - -0.4
629,553 - +0.2
629,621 + A4249_RS02970 0.22 +0.2
629,621 + A4249_RS02970 0.22 +0.5
629,621 + A4249_RS02970 0.22 +0.6
629,621 + A4249_RS02970 0.22 -1.4
629,621 + A4249_RS02970 0.22 +0.6
629,621 + A4249_RS02970 0.22 -1.0
629,621 + A4249_RS02970 0.22 -0.2
629,621 + A4249_RS02970 0.22 +0.5
629,621 + A4249_RS02970 0.22 -0.4
629,621 + A4249_RS02970 0.22 -0.2
629,622 - A4249_RS02970 0.22 +0.4
629,622 - A4249_RS02970 0.22 +0.1
629,622 - A4249_RS02970 0.22 -0.4
629,622 - A4249_RS02970 0.22 -0.9
629,622 - A4249_RS02970 0.22 +0.1
629,623 + A4249_RS02970 0.22 -0.7
629,623 + A4249_RS02970 0.22 -0.6
629,623 + A4249_RS02970 0.22 -0.1
629,623 + A4249_RS02970 0.22 +0.6
629,623 + A4249_RS02970 0.22 -0.3
629,623 + A4249_RS02970 0.22 -1.2
629,624 - A4249_RS02970 0.22 -0.0
629,624 - A4249_RS02970 0.22 -0.1
629,624 - A4249_RS02970 0.22 -0.6
629,624 - A4249_RS02970 0.22 -0.7
629,624 - A4249_RS02970 0.22 +0.3
629,624 - A4249_RS02970 0.22 +0.1
629,684 + A4249_RS02970 0.37 +0.6
629,684 + A4249_RS02970 0.37 +1.0
629,684 + A4249_RS02970 0.37 +0.6
629,684 + A4249_RS02970 0.37 +0.3
629,684 + A4249_RS02970 0.37 -0.6
629,685 - A4249_RS02970 0.37 +0.8
629,685 - A4249_RS02970 0.37 -0.8
629,685 - A4249_RS02970 0.37 -1.4
629,716 - A4249_RS02970 0.45 +0.4
629,716 - A4249_RS02970 0.45 -1.2
629,792 + A4249_RS02970 0.63 +0.8
629,792 + A4249_RS02970 0.63 +0.1
629,801 + A4249_RS02970 0.65 +1.3
629,801 + A4249_RS02970 0.65 +0.2
629,801 + A4249_RS02970 0.65 -0.0
629,802 - A4249_RS02970 0.65 -0.1
629,802 - A4249_RS02970 0.65 -0.2
629,802 - A4249_RS02970 0.65 -1.5
629,802 - A4249_RS02970 0.65 -0.1
629,802 - A4249_RS02970 0.65 +0.2
629,802 - A4249_RS02970 0.65 -0.8
629,802 - A4249_RS02970 0.65 -0.6
629,802 - A4249_RS02970 0.65 -0.7
630,084 + -0.6
630,084 + +0.9
630,085 - -0.7
630,085 - -0.8
630,105 + -0.0
630,105 + -0.7
630,106 - -0.6
630,106 - +0.3
630,106 - -0.5
630,170 - +0.9
630,170 - +1.1
630,705 + A4249_RS02975 0.53 -0.1
630,706 - A4249_RS02975 0.53 -0.4
630,707 + A4249_RS02975 0.53 -0.9
630,707 + A4249_RS02975 0.53 +0.5
631,295 - -0.2
631,454 - A4249_RS02980 0.15 +0.6
631,488 + A4249_RS02980 0.18 +0.0
631,488 + A4249_RS02980 0.18 +0.3
631,489 - A4249_RS02980 0.18 -1.7
631,489 - A4249_RS02980 0.18 +0.0
631,489 - A4249_RS02980 0.18 +0.6
631,498 + A4249_RS02980 0.19 +1.1
631,498 + A4249_RS02980 0.19 -0.2
631,498 + A4249_RS02980 0.19 +0.9
631,498 + A4249_RS02980 0.19 -0.0
631,499 - A4249_RS02980 0.19 +0.8
631,499 - A4249_RS02980 0.19 -1.0
631,499 - A4249_RS02980 0.19 +0.1
631,499 - A4249_RS02980 0.19 -1.0
631,499 - A4249_RS02980 0.19 +0.3
631,528 + A4249_RS02980 0.21 +0.3
631,528 + A4249_RS02980 0.21 +0.0
631,528 + A4249_RS02980 0.21 +0.5
631,528 + A4249_RS02980 0.21 +0.5
631,529 - A4249_RS02980 0.21 +1.6
631,529 - A4249_RS02980 0.21 -0.5
631,529 - A4249_RS02980 0.21 -0.1
631,715 + A4249_RS02980 0.38 -0.3
631,715 + A4249_RS02980 0.38 -0.0
631,716 - A4249_RS02980 0.38 +0.1
631,716 - A4249_RS02980 0.38 +1.2
631,732 + A4249_RS02980 0.39 -0.3
631,732 + A4249_RS02980 0.39 +0.7
631,732 + A4249_RS02980 0.39 -0.1
631,732 + A4249_RS02980 0.39 +0.4
631,732 + A4249_RS02980 0.39 -0.7
631,732 + A4249_RS02980 0.39 -0.9
631,733 - A4249_RS02980 0.39 -0.2
631,733 - A4249_RS02980 0.39 +0.4
631,733 - A4249_RS02980 0.39 +0.8
631,733 - A4249_RS02980 0.39 -2.8
631,733 - A4249_RS02980 0.39 +0.2
631,733 - A4249_RS02980 0.39 -0.1
631,733 - A4249_RS02980 0.39 -1.4
631,733 - A4249_RS02980 0.39 -0.3
631,733 - A4249_RS02980 0.39 -0.3
631,733 - A4249_RS02980 0.39 -0.3
631,759 + A4249_RS02980 0.42 +0.1
631,759 + A4249_RS02980 0.42 +0.1
631,760 - A4249_RS02980 0.42 -2.0
631,849 + A4249_RS02980 0.49 +0.3
631,849 + A4249_RS02980 0.49 -0.7
631,850 - A4249_RS02980 0.49 -0.1
631,850 - A4249_RS02980 0.49 -0.1
631,850 - A4249_RS02980 0.49 -0.2
631,850 - A4249_RS02980 0.49 -0.7
631,929 + A4249_RS02980 0.56 -0.7
631,929 + A4249_RS02980 0.56 +0.0
631,929 + A4249_RS02980 0.56 +0.1
631,930 - A4249_RS02980 0.56 -1.4
631,930 - A4249_RS02980 0.56 +0.2
631,990 + A4249_RS02980 0.62 -0.4
631,990 + A4249_RS02980 0.62 -0.5
631,990 + A4249_RS02980 0.62 +0.4
631,990 + A4249_RS02980 0.62 -0.5
631,991 - A4249_RS02980 0.62 +0.4
631,991 - A4249_RS02980 0.62 +0.1
631,991 - A4249_RS02980 0.62 +0.5
631,991 - A4249_RS02980 0.62 -0.1
632,011 + A4249_RS02980 0.63 +0.2
632,011 + A4249_RS02980 0.63 +0.1
632,011 + A4249_RS02980 0.63 -1.3
632,011 + A4249_RS02980 0.63 +0.3
632,011 + A4249_RS02980 0.63 +0.2
632,012 - A4249_RS02980 0.64 +0.5
632,012 - A4249_RS02980 0.64 +0.1
632,046 + A4249_RS02980 0.66 -0.2
632,046 + A4249_RS02980 0.66 -0.1
632,046 + A4249_RS02980 0.66 -0.0
632,046 + A4249_RS02980 0.66 +0.2
632,046 + A4249_RS02980 0.66 +0.1
632,047 - A4249_RS02980 0.67 +0.1
632,047 - A4249_RS02980 0.67 +1.1
632,047 - A4249_RS02980 0.67 -0.4
632,047 - A4249_RS02980 0.67 +0.3
632,047 - A4249_RS02980 0.67 -0.1
632,110 + A4249_RS02980 0.72 +1.2
632,110 + A4249_RS02980 0.72 +0.1
632,111 - A4249_RS02980 0.72 -0.3
632,111 - A4249_RS02980 0.72 -0.7
632,209 + A4249_RS02980 0.81 -2.1
632,209 + A4249_RS02980 0.81 -0.1
632,209 + A4249_RS02980 0.81 +0.8
632,209 + A4249_RS02980 0.81 -0.4
632,209 + A4249_RS02980 0.81 +0.1
632,210 - A4249_RS02980 0.81 -0.5
632,210 - A4249_RS02980 0.81 +0.5
632,210 - A4249_RS02980 0.81 +0.1
632,210 - A4249_RS02980 0.81 -0.3
632,233 + A4249_RS02980 0.83 -0.4
632,233 + A4249_RS02980 0.83 -0.6
632,234 - A4249_RS02980 0.83 -0.9
632,236 + A4249_RS02980 0.83 +0.2
632,237 - A4249_RS02980 0.83 -0.7
632,237 - A4249_RS02980 0.83 +0.0
632,279 - A4249_RS02980 0.87 +0.4

Or see this region's nucleotide sequence