Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02290 and A4249_RS02295 overlap by 4 nucleotides A4249_RS02295 and A4249_RS02300 are separated by 119 nucleotides A4249_RS02300 and A4249_RS02305 are separated by 103 nucleotides
A4249_RS02290: A4249_RS02290 - holdfast anchoring protein HfaB, at 484,879 to 485,895
_RS02290
A4249_RS02295: A4249_RS02295 - holdfast anchoring protein HfaA, at 485,892 to 486,332
_RS02295
A4249_RS02300: A4249_RS02300 - rhomboid family intramembrane serine protease, at 486,452 to 487,123
_RS02300
A4249_RS02305: A4249_RS02305 - CBS domain-containing protein, at 487,227 to 487,652
_RS02305
Position (kb) 486
487
488 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 485.460 kb on - strand, within A4249_RS02290 at 485.555 kb on + strand, within A4249_RS02290 at 485.555 kb on + strand, within A4249_RS02290 at 485.556 kb on - strand, within A4249_RS02290 at 485.556 kb on - strand, within A4249_RS02290 at 485.556 kb on - strand, within A4249_RS02290 at 485.660 kb on + strand, within A4249_RS02290 at 485.660 kb on + strand, within A4249_RS02290 at 485.660 kb on + strand, within A4249_RS02290 at 485.660 kb on + strand, within A4249_RS02290 at 485.660 kb on + strand, within A4249_RS02290 at 485.660 kb on + strand, within A4249_RS02290 at 485.661 kb on - strand, within A4249_RS02290 at 485.661 kb on - strand, within A4249_RS02290 at 485.706 kb on - strand, within A4249_RS02290 at 485.706 kb on - strand, within A4249_RS02290 at 485.717 kb on + strand, within A4249_RS02290 at 485.718 kb on - strand, within A4249_RS02290 at 485.718 kb on - strand, within A4249_RS02290 at 485.732 kb on + strand, within A4249_RS02290 at 485.732 kb on + strand, within A4249_RS02290 at 485.732 kb on + strand, within A4249_RS02290 at 485.733 kb on - strand, within A4249_RS02290 at 485.733 kb on - strand, within A4249_RS02290 at 485.747 kb on + strand, within A4249_RS02290 at 485.747 kb on + strand, within A4249_RS02290 at 485.748 kb on - strand, within A4249_RS02290 at 485.795 kb on + strand at 485.795 kb on + strand at 485.796 kb on - strand at 485.875 kb on + strand at 485.875 kb on + strand at 485.875 kb on + strand at 485.875 kb on + strand at 485.875 kb on + strand at 485.875 kb on + strand at 485.876 kb on - strand at 485.876 kb on - strand at 485.876 kb on - strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.877 kb on + strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 485.878 kb on - strand at 486.073 kb on + strand, within A4249_RS02295 at 486.073 kb on + strand, within A4249_RS02295 at 486.073 kb on + strand, within A4249_RS02295 at 486.074 kb on - strand, within A4249_RS02295 at 486.106 kb on + strand, within A4249_RS02295 at 486.107 kb on - strand, within A4249_RS02295 at 486.107 kb on - strand, within A4249_RS02295 at 486.107 kb on - strand, within A4249_RS02295 at 486.172 kb on + strand, within A4249_RS02295 at 486.172 kb on + strand, within A4249_RS02295 at 486.189 kb on - strand, within A4249_RS02295 at 486.214 kb on + strand, within A4249_RS02295 at 486.215 kb on - strand, within A4249_RS02295 at 486.215 kb on - strand, within A4249_RS02295 at 486.309 kb on + strand at 486.309 kb on + strand at 486.309 kb on + strand at 486.310 kb on - strand at 486.310 kb on - strand at 486.397 kb on + strand at 486.398 kb on - strand at 486.398 kb on - strand at 486.404 kb on - strand at 486.404 kb on - strand at 486.406 kb on + strand at 486.407 kb on - strand at 486.407 kb on - strand at 486.407 kb on - strand at 486.563 kb on + strand, within A4249_RS02300 at 486.563 kb on + strand, within A4249_RS02300 at 486.563 kb on + strand, within A4249_RS02300 at 486.563 kb on + strand, within A4249_RS02300 at 486.564 kb on - strand, within A4249_RS02300 at 486.564 kb on - strand, within A4249_RS02300 at 486.564 kb on - strand, within A4249_RS02300 at 486.564 kb on - strand, within A4249_RS02300 at 486.564 kb on - strand, within A4249_RS02300 at 486.779 kb on + strand, within A4249_RS02300 at 486.779 kb on + strand, within A4249_RS02300 at 486.780 kb on - strand, within A4249_RS02300 at 486.780 kb on - strand, within A4249_RS02300 at 486.780 kb on - strand, within A4249_RS02300 at 486.780 kb on - strand, within A4249_RS02300 at 486.780 kb on - strand, within A4249_RS02300 at 486.780 kb on - strand, within A4249_RS02300 at 486.812 kb on + strand, within A4249_RS02300 at 487.206 kb on + strand at 487.206 kb on + strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.207 kb on - strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.446 kb on + strand, within A4249_RS02305 at 487.446 kb on + strand, within A4249_RS02305 at 487.446 kb on + strand, within A4249_RS02305 at 487.447 kb on - strand, within A4249_RS02305 at 487.447 kb on - strand, within A4249_RS02305 at 487.447 kb on - strand, within A4249_RS02305 at 487.447 kb on - strand, within A4249_RS02305 at 487.448 kb on + strand, within A4249_RS02305 at 487.448 kb on + strand, within A4249_RS02305 at 487.448 kb on + strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.449 kb on - strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.465 kb on + strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.466 kb on - strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.467 kb on + strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.468 kb on - strand, within A4249_RS02305 at 487.498 kb on + strand, within A4249_RS02305 at 487.498 kb on + strand, within A4249_RS02305 at 487.499 kb on - strand, within A4249_RS02305 at 487.499 kb on - strand, within A4249_RS02305 at 487.499 kb on - strand, within A4249_RS02305 at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.638 kb on + strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.639 kb on - strand at 487.640 kb on + strand at 487.640 kb on + strand at 487.640 kb on + strand at 487.640 kb on + strand at 487.640 kb on + strand at 487.641 kb on - strand at 487.641 kb on - strand at 487.641 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 485,460 - A4249_RS02290 0.57 -0.6 485,555 + A4249_RS02290 0.66 -0.3 485,555 + A4249_RS02290 0.66 -0.1 485,556 - A4249_RS02290 0.67 +0.5 485,556 - A4249_RS02290 0.67 -0.5 485,556 - A4249_RS02290 0.67 +1.0 485,660 + A4249_RS02290 0.77 +0.7 485,660 + A4249_RS02290 0.77 +0.5 485,660 + A4249_RS02290 0.77 -0.5 485,660 + A4249_RS02290 0.77 -0.9 485,660 + A4249_RS02290 0.77 +1.8 485,660 + A4249_RS02290 0.77 -0.5 485,661 - A4249_RS02290 0.77 +0.6 485,661 - A4249_RS02290 0.77 -0.4 485,706 - A4249_RS02290 0.81 +0.8 485,706 - A4249_RS02290 0.81 -0.6 485,717 + A4249_RS02290 0.82 -1.3 485,718 - A4249_RS02290 0.82 -0.1 485,718 - A4249_RS02290 0.82 -0.6 485,732 + A4249_RS02290 0.84 +0.7 485,732 + A4249_RS02290 0.84 +0.5 485,732 + A4249_RS02290 0.84 +0.3 485,733 - A4249_RS02290 0.84 -0.5 485,733 - A4249_RS02290 0.84 +0.2 485,747 + A4249_RS02290 0.85 +0.5 485,747 + A4249_RS02290 0.85 -0.5 485,748 - A4249_RS02290 0.85 +0.5 485,795 + -0.5 485,795 + -0.0 485,796 - +0.1 485,875 + -2.6 485,875 + -1.6 485,875 + +0.3 485,875 + +1.4 485,875 + +0.4 485,875 + -0.1 485,876 - -0.7 485,876 - -0.1 485,876 - +0.2 485,877 + -0.6 485,877 + -0.1 485,877 + +0.1 485,877 + -0.0 485,877 + +0.0 485,877 + -0.1 485,877 + +1.0 485,877 + -0.5 485,877 + +0.3 485,877 + +0.7 485,878 - +0.4 485,878 - +0.3 485,878 - -0.1 485,878 - -0.1 485,878 - -0.8 485,878 - -0.3 485,878 - -0.3 485,878 - +0.5 485,878 - -0.2 485,878 - -0.1 485,878 - -0.4 486,073 + A4249_RS02295 0.41 +0.1 486,073 + A4249_RS02295 0.41 +0.1 486,073 + A4249_RS02295 0.41 +0.1 486,074 - A4249_RS02295 0.41 -0.3 486,106 + A4249_RS02295 0.49 +0.1 486,107 - A4249_RS02295 0.49 -0.4 486,107 - A4249_RS02295 0.49 -0.2 486,107 - A4249_RS02295 0.49 +0.0 486,172 + A4249_RS02295 0.63 +0.1 486,172 + A4249_RS02295 0.63 +0.2 486,189 - A4249_RS02295 0.67 +0.0 486,214 + A4249_RS02295 0.73 -0.2 486,215 - A4249_RS02295 0.73 +0.5 486,215 - A4249_RS02295 0.73 -0.2 486,309 + +0.3 486,309 + +0.5 486,309 + +0.2 486,310 - -0.2 486,310 - +1.5 486,397 + -1.4 486,398 - -0.2 486,398 - +0.7 486,404 - +0.3 486,404 - -0.3 486,406 + +0.4 486,407 - -0.4 486,407 - -1.2 486,407 - +0.7 486,563 + A4249_RS02300 0.17 -1.2 486,563 + A4249_RS02300 0.17 +0.9 486,563 + A4249_RS02300 0.17 +1.0 486,563 + A4249_RS02300 0.17 -2.1 486,564 - A4249_RS02300 0.17 +1.2 486,564 - A4249_RS02300 0.17 -1.3 486,564 - A4249_RS02300 0.17 -0.9 486,564 - A4249_RS02300 0.17 +0.9 486,564 - A4249_RS02300 0.17 -0.0 486,779 + A4249_RS02300 0.49 +0.5 486,779 + A4249_RS02300 0.49 +0.0 486,780 - A4249_RS02300 0.49 +0.5 486,780 - A4249_RS02300 0.49 +1.1 486,780 - A4249_RS02300 0.49 -0.7 486,780 - A4249_RS02300 0.49 -0.2 486,780 - A4249_RS02300 0.49 -0.1 486,780 - A4249_RS02300 0.49 +0.5 486,812 + A4249_RS02300 0.54 +0.7 487,206 + -0.3 487,206 + -0.2 487,207 - -0.7 487,207 - +0.6 487,207 - +0.2 487,207 - -0.2 487,207 - +0.1 487,207 - -0.2 487,207 - -0.4 487,207 - -0.3 487,207 - -1.0 487,209 + -0.6 487,209 + -0.9 487,209 + +0.0 487,209 + +0.1 487,210 - -0.3 487,210 - +0.2 487,210 - -1.5 487,210 - +0.1 487,210 - -0.2 487,446 + A4249_RS02305 0.51 -0.2 487,446 + A4249_RS02305 0.51 +0.0 487,446 + A4249_RS02305 0.51 -0.7 487,447 - A4249_RS02305 0.52 -1.9 487,447 - A4249_RS02305 0.52 +0.3 487,447 - A4249_RS02305 0.52 +0.7 487,447 - A4249_RS02305 0.52 -0.6 487,448 + A4249_RS02305 0.52 -0.9 487,448 + A4249_RS02305 0.52 +0.8 487,448 + A4249_RS02305 0.52 -0.4 487,449 - A4249_RS02305 0.52 -0.8 487,449 - A4249_RS02305 0.52 -0.2 487,449 - A4249_RS02305 0.52 +1.1 487,449 - A4249_RS02305 0.52 -0.8 487,449 - A4249_RS02305 0.52 -0.3 487,449 - A4249_RS02305 0.52 -1.2 487,449 - A4249_RS02305 0.52 -1.0 487,465 + A4249_RS02305 0.56 +1.1 487,465 + A4249_RS02305 0.56 -0.7 487,465 + A4249_RS02305 0.56 -1.1 487,465 + A4249_RS02305 0.56 -1.1 487,465 + A4249_RS02305 0.56 +0.2 487,465 + A4249_RS02305 0.56 +1.3 487,465 + A4249_RS02305 0.56 +0.5 487,465 + A4249_RS02305 0.56 +0.5 487,465 + A4249_RS02305 0.56 -2.1 487,465 + A4249_RS02305 0.56 -0.6 487,465 + A4249_RS02305 0.56 -1.0 487,465 + A4249_RS02305 0.56 -0.1 487,466 - A4249_RS02305 0.56 -0.3 487,466 - A4249_RS02305 0.56 -0.4 487,466 - A4249_RS02305 0.56 +0.1 487,466 - A4249_RS02305 0.56 +0.1 487,466 - A4249_RS02305 0.56 -0.3 487,466 - A4249_RS02305 0.56 -1.3 487,466 - A4249_RS02305 0.56 -2.1 487,466 - A4249_RS02305 0.56 -0.9 487,466 - A4249_RS02305 0.56 -0.4 487,466 - A4249_RS02305 0.56 +0.6 487,466 - A4249_RS02305 0.56 +0.5 487,466 - A4249_RS02305 0.56 -0.2 487,466 - A4249_RS02305 0.56 -2.6 487,466 - A4249_RS02305 0.56 +0.3 487,466 - A4249_RS02305 0.56 +0.4 487,466 - A4249_RS02305 0.56 -0.1 487,466 - A4249_RS02305 0.56 -0.4 487,466 - A4249_RS02305 0.56 +0.2 487,466 - A4249_RS02305 0.56 +0.0 487,466 - A4249_RS02305 0.56 +0.1 487,466 - A4249_RS02305 0.56 +1.5 487,466 - A4249_RS02305 0.56 -0.8 487,467 + A4249_RS02305 0.56 +0.4 487,467 + A4249_RS02305 0.56 +0.3 487,467 + A4249_RS02305 0.56 -1.3 487,467 + A4249_RS02305 0.56 -1.1 487,467 + A4249_RS02305 0.56 -0.2 487,467 + A4249_RS02305 0.56 +0.4 487,467 + A4249_RS02305 0.56 -0.4 487,467 + A4249_RS02305 0.56 +0.1 487,467 + A4249_RS02305 0.56 -1.7 487,467 + A4249_RS02305 0.56 -0.8 487,467 + A4249_RS02305 0.56 +1.0 487,467 + A4249_RS02305 0.56 -0.6 487,467 + A4249_RS02305 0.56 -3.0 487,468 - A4249_RS02305 0.57 -1.0 487,468 - A4249_RS02305 0.57 +0.8 487,468 - A4249_RS02305 0.57 -0.6 487,468 - A4249_RS02305 0.57 -0.9 487,468 - A4249_RS02305 0.57 -0.5 487,468 - A4249_RS02305 0.57 +0.4 487,468 - A4249_RS02305 0.57 -2.4 487,468 - A4249_RS02305 0.57 +0.3 487,468 - A4249_RS02305 0.57 -0.2 487,468 - A4249_RS02305 0.57 -1.7 487,468 - A4249_RS02305 0.57 +0.5 487,468 - A4249_RS02305 0.57 -0.6 487,468 - A4249_RS02305 0.57 -0.2 487,468 - A4249_RS02305 0.57 -1.3 487,498 + A4249_RS02305 0.64 +1.1 487,498 + A4249_RS02305 0.64 -0.5 487,499 - A4249_RS02305 0.64 +0.8 487,499 - A4249_RS02305 0.64 +0.7 487,499 - A4249_RS02305 0.64 -0.7 487,638 + +0.1 487,638 + +0.5 487,638 + -1.1 487,638 + -1.1 487,638 + -0.0 487,638 + -0.3 487,638 + -1.6 487,638 + +0.8 487,638 + +0.5 487,638 + +0.2 487,638 + -0.7 487,638 + -0.6 487,638 + -0.2 487,638 + -0.4 487,639 - +1.6 487,639 - +1.4 487,639 - +0.8 487,639 - -0.2 487,639 - +0.8 487,639 - -0.9 487,639 - +0.1 487,639 - -0.9 487,639 - +1.2 487,639 - +0.2 487,639 - +0.0 487,639 - +0.4 487,639 - -0.5 487,639 - +2.1 487,639 - -0.9 487,639 - -0.1 487,639 - +0.4 487,640 + +0.5 487,640 + +0.1 487,640 + -0.3 487,640 + -3.2 487,640 + -2.3 487,641 - -0.2 487,641 - +0.3 487,641 - +0.9
Or see this region's nucleotide sequence