Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01265

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01255 and A4249_RS01260 are separated by 39 nucleotidesA4249_RS01260 and A4249_RS01265 are separated by 65 nucleotidesA4249_RS01265 and A4249_RS01270 overlap by 1 nucleotidesA4249_RS01270 and A4249_RS01275 overlap by 25 nucleotides A4249_RS01255: A4249_RS01255 - phage tail tube protein, at 240,650 to 241,639 _RS01255 A4249_RS01260: A4249_RS01260 - hypothetical protein, at 241,679 to 241,915 _RS01260 A4249_RS01265: A4249_RS01265 - hypothetical protein, at 241,981 to 242,490 _RS01265 A4249_RS01270: A4249_RS01270 - DUF6441 family protein, at 242,490 to 243,359 _RS01270 A4249_RS01275: A4249_RS01275 - hypothetical protein, at 243,335 to 243,673 _RS01275 Position (kb) 241 242 243Strain fitness (log2 ratio) -2 -1 0 1at 240.984 kb on + strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 240.985 kb on - strand, within A4249_RS01255at 241.134 kb on + strand, within A4249_RS01255at 241.134 kb on + strand, within A4249_RS01255at 241.134 kb on + strand, within A4249_RS01255at 241.134 kb on + strand, within A4249_RS01255at 241.134 kb on + strand, within A4249_RS01255at 241.135 kb on - strand, within A4249_RS01255at 241.135 kb on - strand, within A4249_RS01255at 241.135 kb on - strand, within A4249_RS01255at 241.161 kb on + strand, within A4249_RS01255at 241.161 kb on + strand, within A4249_RS01255at 241.162 kb on - strand, within A4249_RS01255at 241.182 kb on + strand, within A4249_RS01255at 241.182 kb on + strand, within A4249_RS01255at 241.182 kb on + strand, within A4249_RS01255at 241.182 kb on + strand, within A4249_RS01255at 241.183 kb on - strand, within A4249_RS01255at 241.183 kb on - strand, within A4249_RS01255at 241.183 kb on - strand, within A4249_RS01255at 241.183 kb on - strand, within A4249_RS01255at 241.312 kb on + strand, within A4249_RS01255at 241.312 kb on + strand, within A4249_RS01255at 241.313 kb on - strand, within A4249_RS01255at 241.313 kb on - strand, within A4249_RS01255at 241.313 kb on - strand, within A4249_RS01255at 241.313 kb on - strand, within A4249_RS01255at 241.313 kb on - strand, within A4249_RS01255at 241.320 kb on + strand, within A4249_RS01255at 241.320 kb on + strand, within A4249_RS01255at 241.320 kb on + strand, within A4249_RS01255at 241.320 kb on + strand, within A4249_RS01255at 241.321 kb on - strand, within A4249_RS01255at 241.321 kb on - strand, within A4249_RS01255at 241.321 kb on - strand, within A4249_RS01255at 241.321 kb on - strand, within A4249_RS01255at 241.321 kb on - strand, within A4249_RS01255at 241.321 kb on - strand, within A4249_RS01255at 241.524 kb on + strand, within A4249_RS01255at 241.524 kb on + strand, within A4249_RS01255at 241.524 kb on + strand, within A4249_RS01255at 241.524 kb on + strand, within A4249_RS01255at 241.524 kb on + strand, within A4249_RS01255at 241.525 kb on - strand, within A4249_RS01255at 241.596 kb on + strandat 241.596 kb on + strandat 241.596 kb on + strandat 241.596 kb on + strandat 241.596 kb on + strandat 242.006 kb on + strandat 242.006 kb on + strandat 242.007 kb on - strandat 242.007 kb on - strandat 242.007 kb on - strandat 242.007 kb on - strandat 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.099 kb on + strand, within A4249_RS01265at 242.100 kb on - strand, within A4249_RS01265at 242.240 kb on + strand, within A4249_RS01265at 242.241 kb on - strand, within A4249_RS01265at 242.339 kb on - strand, within A4249_RS01265at 242.782 kb on + strand, within A4249_RS01270at 242.782 kb on + strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 242.969 kb on - strand, within A4249_RS01270at 243.071 kb on + strand, within A4249_RS01270at 243.071 kb on + strand, within A4249_RS01270at 243.072 kb on - strand, within A4249_RS01270at 243.072 kb on - strand, within A4249_RS01270at 243.072 kb on - strand, within A4249_RS01270at 243.161 kb on + strand, within A4249_RS01270at 243.230 kb on + strand, within A4249_RS01270at 243.230 kb on + strand, within A4249_RS01270at 243.230 kb on + strand, within A4249_RS01270at 243.231 kb on - strand, within A4249_RS01270at 243.231 kb on - strand, within A4249_RS01270at 243.231 kb on - strand, within A4249_RS01270at 243.231 kb on - strand, within A4249_RS01270at 243.253 kb on + strand, within A4249_RS01270at 243.253 kb on + strand, within A4249_RS01270at 243.253 kb on + strand, within A4249_RS01270at 243.254 kb on - strand, within A4249_RS01270at 243.422 kb on + strand, within A4249_RS01275at 243.423 kb on - strand, within A4249_RS01275at 243.423 kb on - strand, within A4249_RS01275at 243.423 kb on - strand, within A4249_RS01275at 243.423 kb on - strand, within A4249_RS01275at 243.423 kb on - strand, within A4249_RS01275

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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240,984 + A4249_RS01255 0.34 +0.1
240,985 - A4249_RS01255 0.34 -0.2
240,985 - A4249_RS01255 0.34 +0.0
240,985 - A4249_RS01255 0.34 +0.1
240,985 - A4249_RS01255 0.34 -1.8
240,985 - A4249_RS01255 0.34 -1.0
240,985 - A4249_RS01255 0.34 +0.3
240,985 - A4249_RS01255 0.34 -1.0
240,985 - A4249_RS01255 0.34 -0.1
240,985 - A4249_RS01255 0.34 -1.0
241,134 + A4249_RS01255 0.49 +0.5
241,134 + A4249_RS01255 0.49 +0.2
241,134 + A4249_RS01255 0.49 +0.2
241,134 + A4249_RS01255 0.49 +1.4
241,134 + A4249_RS01255 0.49 -0.3
241,135 - A4249_RS01255 0.49 -0.2
241,135 - A4249_RS01255 0.49 -0.1
241,135 - A4249_RS01255 0.49 +1.4
241,161 + A4249_RS01255 0.52 -1.3
241,161 + A4249_RS01255 0.52 +0.5
241,162 - A4249_RS01255 0.52 +0.7
241,182 + A4249_RS01255 0.54 -0.4
241,182 + A4249_RS01255 0.54 -0.6
241,182 + A4249_RS01255 0.54 +0.5
241,182 + A4249_RS01255 0.54 +0.3
241,183 - A4249_RS01255 0.54 -0.5
241,183 - A4249_RS01255 0.54 +0.4
241,183 - A4249_RS01255 0.54 -0.9
241,183 - A4249_RS01255 0.54 -0.6
241,312 + A4249_RS01255 0.67 +1.0
241,312 + A4249_RS01255 0.67 -0.1
241,313 - A4249_RS01255 0.67 +0.3
241,313 - A4249_RS01255 0.67 +0.8
241,313 - A4249_RS01255 0.67 -0.6
241,313 - A4249_RS01255 0.67 +0.6
241,313 - A4249_RS01255 0.67 -0.9
241,320 + A4249_RS01255 0.68 +0.1
241,320 + A4249_RS01255 0.68 -0.5
241,320 + A4249_RS01255 0.68 +0.3
241,320 + A4249_RS01255 0.68 -0.5
241,321 - A4249_RS01255 0.68 -0.3
241,321 - A4249_RS01255 0.68 -0.8
241,321 - A4249_RS01255 0.68 -1.2
241,321 - A4249_RS01255 0.68 +0.1
241,321 - A4249_RS01255 0.68 -1.5
241,321 - A4249_RS01255 0.68 -2.3
241,524 + A4249_RS01255 0.88 +0.4
241,524 + A4249_RS01255 0.88 -0.8
241,524 + A4249_RS01255 0.88 -0.3
241,524 + A4249_RS01255 0.88 +0.1
241,524 + A4249_RS01255 0.88 -0.4
241,525 - A4249_RS01255 0.88 -0.0
241,596 + +0.2
241,596 + -0.5
241,596 + +0.7
241,596 + +0.5
241,596 + +0.0
242,006 + -0.5
242,006 + -0.2
242,007 - +0.1
242,007 - -0.5
242,007 - -2.0
242,007 - -2.3
242,099 + A4249_RS01265 0.23 -0.4
242,099 + A4249_RS01265 0.23 +0.8
242,099 + A4249_RS01265 0.23 -0.8
242,099 + A4249_RS01265 0.23 +0.0
242,099 + A4249_RS01265 0.23 +0.4
242,099 + A4249_RS01265 0.23 -1.8
242,099 + A4249_RS01265 0.23 -0.4
242,099 + A4249_RS01265 0.23 -0.0
242,100 - A4249_RS01265 0.23 -0.7
242,240 + A4249_RS01265 0.51 -0.9
242,241 - A4249_RS01265 0.51 -1.5
242,339 - A4249_RS01265 0.70 -0.5
242,782 + A4249_RS01270 0.34 -0.5
242,782 + A4249_RS01270 0.34 -0.3
242,969 - A4249_RS01270 0.55 +1.2
242,969 - A4249_RS01270 0.55 -0.6
242,969 - A4249_RS01270 0.55 +0.4
242,969 - A4249_RS01270 0.55 +1.1
242,969 - A4249_RS01270 0.55 -0.4
242,969 - A4249_RS01270 0.55 -1.1
242,969 - A4249_RS01270 0.55 -1.5
242,969 - A4249_RS01270 0.55 -1.9
243,071 + A4249_RS01270 0.67 -0.0
243,071 + A4249_RS01270 0.67 +1.0
243,072 - A4249_RS01270 0.67 +0.8
243,072 - A4249_RS01270 0.67 +0.6
243,072 - A4249_RS01270 0.67 -0.0
243,161 + A4249_RS01270 0.77 +0.1
243,230 + A4249_RS01270 0.85 -0.7
243,230 + A4249_RS01270 0.85 -1.1
243,230 + A4249_RS01270 0.85 -0.6
243,231 - A4249_RS01270 0.85 +0.5
243,231 - A4249_RS01270 0.85 +0.1
243,231 - A4249_RS01270 0.85 -0.6
243,231 - A4249_RS01270 0.85 -0.6
243,253 + A4249_RS01270 0.88 +0.5
243,253 + A4249_RS01270 0.88 +0.7
243,253 + A4249_RS01270 0.88 -2.6
243,254 - A4249_RS01270 0.88 +0.5
243,422 + A4249_RS01275 0.26 -0.1
243,423 - A4249_RS01275 0.26 -0.1
243,423 - A4249_RS01275 0.26 -0.5
243,423 - A4249_RS01275 0.26 -0.1
243,423 - A4249_RS01275 0.26 -0.2
243,423 - A4249_RS01275 0.26 -0.3

Or see this region's nucleotide sequence