Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00970 and A4249_RS00975 are separated by 129 nucleotides A4249_RS00975 and A4249_RS00980 are separated by 209 nucleotides
A4249_RS00970: A4249_RS00970 - glycine--tRNA ligase subunit beta, at 180,844 to 183,009
_RS00970
A4249_RS00975: A4249_RS00975 - DUF559 domain-containing protein, at 183,139 to 183,492
_RS00975
A4249_RS00980: A4249_RS00980 - pyruvate, phosphate dikinase, at 183,702 to 186,383
_RS00980
Position (kb) 183
184 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 183.140 kb on + strand at 183.140 kb on + strand at 183.140 kb on + strand at 183.140 kb on + strand at 183.140 kb on + strand at 183.141 kb on - strand at 183.141 kb on - strand at 183.141 kb on - strand at 183.141 kb on - strand at 183.141 kb on - strand at 183.141 kb on - strand at 183.338 kb on + strand, within A4249_RS00975 at 183.338 kb on + strand, within A4249_RS00975 at 183.338 kb on + strand, within A4249_RS00975 at 183.339 kb on - strand, within A4249_RS00975 at 183.339 kb on - strand, within A4249_RS00975 at 183.339 kb on - strand, within A4249_RS00975 at 183.339 kb on - strand, within A4249_RS00975 at 183.339 kb on - strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.353 kb on + strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.354 kb on - strand, within A4249_RS00975 at 183.574 kb on + strand at 183.574 kb on + strand at 183.575 kb on - strand at 183.575 kb on - strand at 183.575 kb on - strand at 183.575 kb on - strand at 183.575 kb on - strand at 183.604 kb on + strand at 183.604 kb on + strand at 183.605 kb on - strand at 183.605 kb on - strand at 183.605 kb on - strand at 183.605 kb on - strand at 183.638 kb on + strand at 183.638 kb on + strand at 183.638 kb on + strand at 183.638 kb on + strand at 183.639 kb on - strand at 183.639 kb on - strand at 183.720 kb on + strand at 183.720 kb on + strand at 183.720 kb on + strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.721 kb on - strand at 183.864 kb on + strand at 183.864 kb on + strand at 183.865 kb on - strand at 183.865 kb on - strand at 183.865 kb on - strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.867 kb on + strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.868 kb on - strand at 183.872 kb on + strand at 183.873 kb on - strand at 183.885 kb on + strand at 183.885 kb on + strand at 183.886 kb on - strand at 183.886 kb on - strand at 184.113 kb on + strand, within A4249_RS00980 at 184.113 kb on + strand, within A4249_RS00980 at 184.113 kb on + strand, within A4249_RS00980 at 184.114 kb on - strand, within A4249_RS00980 at 184.114 kb on - strand, within A4249_RS00980 at 184.114 kb on - strand, within A4249_RS00980 at 184.114 kb on - strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.134 kb on + strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.135 kb on - strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.263 kb on + strand, within A4249_RS00980 at 184.264 kb on - strand, within A4249_RS00980 at 184.264 kb on - strand, within A4249_RS00980 at 184.264 kb on - strand, within A4249_RS00980 at 184.264 kb on - strand, within A4249_RS00980 at 184.380 kb on + strand, within A4249_RS00980 at 184.380 kb on + strand, within A4249_RS00980 at 184.451 kb on + strand, within A4249_RS00980 at 184.451 kb on + strand, within A4249_RS00980 at 184.452 kb on - strand, within A4249_RS00980
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 183,140 + -0.8 183,140 + +0.2 183,140 + -0.4 183,140 + +0.3 183,140 + -0.1 183,141 - -0.6 183,141 - -0.1 183,141 - -1.1 183,141 - -1.3 183,141 - -0.2 183,141 - -1.6 183,338 + A4249_RS00975 0.56 -0.5 183,338 + A4249_RS00975 0.56 -2.2 183,338 + A4249_RS00975 0.56 -0.8 183,339 - A4249_RS00975 0.56 +0.4 183,339 - A4249_RS00975 0.56 +0.8 183,339 - A4249_RS00975 0.56 -0.7 183,339 - A4249_RS00975 0.56 -0.7 183,339 - A4249_RS00975 0.56 +1.4 183,353 + A4249_RS00975 0.60 +1.4 183,353 + A4249_RS00975 0.60 +0.3 183,353 + A4249_RS00975 0.60 -1.6 183,353 + A4249_RS00975 0.60 +0.0 183,353 + A4249_RS00975 0.60 -1.0 183,353 + A4249_RS00975 0.60 +0.4 183,353 + A4249_RS00975 0.60 -0.0 183,353 + A4249_RS00975 0.60 +0.3 183,354 - A4249_RS00975 0.61 -0.5 183,354 - A4249_RS00975 0.61 -0.5 183,354 - A4249_RS00975 0.61 +0.2 183,354 - A4249_RS00975 0.61 -0.2 183,354 - A4249_RS00975 0.61 +0.2 183,354 - A4249_RS00975 0.61 -3.3 183,354 - A4249_RS00975 0.61 -1.3 183,354 - A4249_RS00975 0.61 +0.4 183,354 - A4249_RS00975 0.61 +0.0 183,354 - A4249_RS00975 0.61 +1.5 183,574 + -2.2 183,574 + -0.2 183,575 - -0.7 183,575 - -0.3 183,575 - -1.2 183,575 - -0.5 183,575 - -0.5 183,604 + +0.2 183,604 + -0.1 183,605 - -0.1 183,605 - +0.0 183,605 - +0.4 183,605 - +0.8 183,638 + +0.6 183,638 + -0.9 183,638 + +0.1 183,638 + -0.5 183,639 - +0.8 183,639 - +1.0 183,720 + +0.2 183,720 + +0.2 183,720 + +0.6 183,721 - +1.4 183,721 - +1.0 183,721 - +1.0 183,721 - +0.8 183,721 - +0.8 183,721 - +0.9 183,721 - +1.0 183,721 - +1.1 183,864 + +0.4 183,864 + +0.8 183,865 - +0.8 183,865 - +0.5 183,865 - +1.2 183,867 + +1.0 183,867 + +0.7 183,867 + +0.9 183,867 + +1.0 183,867 + +0.5 183,867 + +0.4 183,867 + +0.7 183,867 + +0.8 183,867 + +0.7 183,867 + +1.4 183,867 + +0.9 183,867 + +1.0 183,867 + +1.3 183,867 + +1.4 183,867 + +1.1 183,868 - +1.1 183,868 - +1.0 183,868 - +1.4 183,868 - +0.3 183,868 - +1.0 183,868 - +0.7 183,868 - +1.1 183,868 - +0.8 183,868 - +0.9 183,872 + +1.2 183,873 - +0.8 183,885 + +1.4 183,885 + +0.4 183,886 - +1.4 183,886 - +1.3 184,113 + A4249_RS00980 0.15 +1.9 184,113 + A4249_RS00980 0.15 +0.9 184,113 + A4249_RS00980 0.15 +1.1 184,114 - A4249_RS00980 0.15 +0.8 184,114 - A4249_RS00980 0.15 +0.9 184,114 - A4249_RS00980 0.15 +1.2 184,114 - A4249_RS00980 0.15 +0.4 184,134 + A4249_RS00980 0.16 +0.9 184,134 + A4249_RS00980 0.16 +1.4 184,134 + A4249_RS00980 0.16 +0.6 184,134 + A4249_RS00980 0.16 +1.3 184,134 + A4249_RS00980 0.16 +1.6 184,134 + A4249_RS00980 0.16 +1.2 184,134 + A4249_RS00980 0.16 +1.9 184,134 + A4249_RS00980 0.16 +0.7 184,134 + A4249_RS00980 0.16 +0.6 184,134 + A4249_RS00980 0.16 +0.2 184,134 + A4249_RS00980 0.16 +0.4 184,134 + A4249_RS00980 0.16 +1.3 184,134 + A4249_RS00980 0.16 +1.0 184,135 - A4249_RS00980 0.16 +1.0 184,135 - A4249_RS00980 0.16 +0.7 184,135 - A4249_RS00980 0.16 +0.9 184,135 - A4249_RS00980 0.16 +1.0 184,135 - A4249_RS00980 0.16 +1.2 184,135 - A4249_RS00980 0.16 +0.2 184,135 - A4249_RS00980 0.16 +1.2 184,135 - A4249_RS00980 0.16 +1.3 184,135 - A4249_RS00980 0.16 +1.1 184,263 + A4249_RS00980 0.21 +0.8 184,263 + A4249_RS00980 0.21 +1.5 184,263 + A4249_RS00980 0.21 +0.9 184,263 + A4249_RS00980 0.21 +0.9 184,263 + A4249_RS00980 0.21 +1.1 184,263 + A4249_RS00980 0.21 +0.4 184,263 + A4249_RS00980 0.21 +0.8 184,263 + A4249_RS00980 0.21 +1.2 184,264 - A4249_RS00980 0.21 +0.4 184,264 - A4249_RS00980 0.21 +1.0 184,264 - A4249_RS00980 0.21 +1.3 184,264 - A4249_RS00980 0.21 +1.0 184,380 + A4249_RS00980 0.25 +1.0 184,380 + A4249_RS00980 0.25 +1.4 184,451 + A4249_RS00980 0.28 +0.9 184,451 + A4249_RS00980 0.28 +0.8 184,452 - A4249_RS00980 0.28 +1.3
Or see this region's nucleotide sequence