Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00525 and A4249_RS00530 are separated by 162 nucleotides A4249_RS00530 and A4249_RS00535 are separated by 111 nucleotides
A4249_RS00525: A4249_RS00525 - molybdopterin-binding protein, at 87,086 to 87,853
_RS00525
A4249_RS00530: A4249_RS00530 - outer membrane protein transport protein, at 88,016 to 89,380
_RS00530
A4249_RS00535: A4249_RS00535 - DEAD/DEAH box helicase, at 89,492 to 90,967
_RS00535
Position (kb) 88
89
90 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 87.047 kb on + strand at 87.048 kb on + strand at 87.048 kb on + strand at 87.049 kb on - strand at 87.049 kb on - strand at 87.049 kb on - strand at 87.049 kb on - strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.050 kb on + strand at 87.051 kb on - strand at 87.051 kb on - strand at 87.051 kb on - strand at 87.051 kb on - strand at 87.051 kb on - strand at 87.051 kb on - strand at 87.051 kb on - strand at 87.299 kb on + strand, within A4249_RS00525 at 87.299 kb on + strand, within A4249_RS00525 at 87.299 kb on + strand, within A4249_RS00525 at 87.299 kb on + strand, within A4249_RS00525 at 87.299 kb on + strand, within A4249_RS00525 at 87.299 kb on + strand, within A4249_RS00525 at 87.299 kb on + strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.300 kb on - strand, within A4249_RS00525 at 87.422 kb on + strand, within A4249_RS00525 at 87.423 kb on - strand, within A4249_RS00525 at 87.713 kb on + strand, within A4249_RS00525 at 87.713 kb on + strand, within A4249_RS00525 at 87.714 kb on - strand, within A4249_RS00525 at 87.714 kb on - strand, within A4249_RS00525 at 87.823 kb on + strand at 87.828 kb on + strand at 87.828 kb on + strand at 87.829 kb on - strand at 87.984 kb on + strand at 88.000 kb on + strand at 88.001 kb on - strand at 88.001 kb on - strand at 88.001 kb on - strand at 88.001 kb on - strand at 88.001 kb on - strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.004 kb on + strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.005 kb on - strand at 88.010 kb on + strand at 88.010 kb on + strand at 88.010 kb on + strand at 88.011 kb on - strand at 88.011 kb on - strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.109 kb on + strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.110 kb on - strand at 88.229 kb on + strand, within A4249_RS00530 at 88.229 kb on + strand, within A4249_RS00530 at 88.229 kb on + strand, within A4249_RS00530 at 88.229 kb on + strand, within A4249_RS00530 at 88.229 kb on + strand, within A4249_RS00530 at 88.229 kb on + strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.230 kb on - strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.292 kb on + strand, within A4249_RS00530 at 88.293 kb on - strand, within A4249_RS00530 at 88.293 kb on - strand, within A4249_RS00530 at 88.293 kb on - strand, within A4249_RS00530 at 88.293 kb on - strand, within A4249_RS00530 at 88.293 kb on - strand, within A4249_RS00530 at 88.293 kb on - strand, within A4249_RS00530 at 88.470 kb on - strand, within A4249_RS00530 at 88.470 kb on - strand, within A4249_RS00530 at 88.470 kb on - strand, within A4249_RS00530 at 88.487 kb on + strand, within A4249_RS00530 at 88.487 kb on + strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.488 kb on - strand, within A4249_RS00530 at 88.511 kb on + strand, within A4249_RS00530 at 88.613 kb on + strand, within A4249_RS00530 at 88.614 kb on - strand, within A4249_RS00530 at 88.737 kb on - strand, within A4249_RS00530 at 88.793 kb on + strand, within A4249_RS00530 at 88.793 kb on + strand, within A4249_RS00530 at 88.830 kb on + strand, within A4249_RS00530 at 88.831 kb on - strand, within A4249_RS00530 at 88.910 kb on + strand, within A4249_RS00530 at 88.910 kb on + strand, within A4249_RS00530 at 88.910 kb on + strand, within A4249_RS00530 at 88.910 kb on + strand, within A4249_RS00530 at 88.911 kb on - strand, within A4249_RS00530 at 88.911 kb on - strand, within A4249_RS00530 at 88.931 kb on + strand, within A4249_RS00530 at 88.932 kb on - strand, within A4249_RS00530 at 89.013 kb on - strand, within A4249_RS00530 at 89.013 kb on - strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.045 kb on + strand, within A4249_RS00530 at 89.046 kb on - strand, within A4249_RS00530 at 89.046 kb on - strand, within A4249_RS00530 at 89.046 kb on - strand, within A4249_RS00530 at 89.046 kb on - strand, within A4249_RS00530 at 89.046 kb on - strand, within A4249_RS00530 at 89.081 kb on + strand, within A4249_RS00530 at 89.082 kb on - strand, within A4249_RS00530 at 89.082 kb on - strand, within A4249_RS00530 at 89.123 kb on + strand, within A4249_RS00530 at 89.124 kb on - strand, within A4249_RS00530 at 89.164 kb on + strand, within A4249_RS00530 at 89.164 kb on + strand, within A4249_RS00530 at 89.165 kb on - strand, within A4249_RS00530 at 89.189 kb on + strand, within A4249_RS00530 at 89.189 kb on + strand, within A4249_RS00530 at 89.189 kb on + strand, within A4249_RS00530 at 89.189 kb on + strand, within A4249_RS00530 at 89.190 kb on - strand, within A4249_RS00530 at 89.190 kb on - strand, within A4249_RS00530 at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.246 kb on + strand at 89.247 kb on - strand at 89.247 kb on - strand at 89.247 kb on - strand at 89.247 kb on - strand at 89.247 kb on - strand at 89.291 kb on + strand at 89.291 kb on + strand at 89.291 kb on + strand at 89.291 kb on + strand at 89.291 kb on + strand at 89.291 kb on + strand at 89.291 kb on + strand at 89.292 kb on - strand at 89.292 kb on - strand at 89.292 kb on - strand at 89.514 kb on + strand at 89.625 kb on + strand at 89.625 kb on + strand at 89.625 kb on + strand at 89.625 kb on + strand at 89.626 kb on - strand at 89.626 kb on - strand at 89.626 kb on - strand at 89.626 kb on - strand at 89.626 kb on - strand at 89.626 kb on - strand at 89.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 87,047 + +0.0 87,048 + -0.9 87,048 + -0.4 87,049 - +0.1 87,049 - +1.1 87,049 - -2.2 87,049 - +0.1 87,050 + -1.5 87,050 + -0.7 87,050 + -0.5 87,050 + +0.9 87,050 + +0.1 87,050 + -0.1 87,050 + -0.5 87,050 + -1.2 87,050 + -0.9 87,050 + -0.7 87,051 - -0.3 87,051 - +0.0 87,051 - -1.4 87,051 - -2.2 87,051 - +0.3 87,051 - -0.2 87,051 - -1.3 87,299 + A4249_RS00525 0.28 +0.3 87,299 + A4249_RS00525 0.28 +0.3 87,299 + A4249_RS00525 0.28 +1.4 87,299 + A4249_RS00525 0.28 -0.5 87,299 + A4249_RS00525 0.28 +0.7 87,299 + A4249_RS00525 0.28 -0.1 87,299 + A4249_RS00525 0.28 -0.2 87,300 - A4249_RS00525 0.28 -0.2 87,300 - A4249_RS00525 0.28 -0.3 87,300 - A4249_RS00525 0.28 -0.0 87,300 - A4249_RS00525 0.28 +0.3 87,300 - A4249_RS00525 0.28 -1.7 87,300 - A4249_RS00525 0.28 +0.6 87,300 - A4249_RS00525 0.28 +0.0 87,300 - A4249_RS00525 0.28 +0.6 87,300 - A4249_RS00525 0.28 -0.7 87,300 - A4249_RS00525 0.28 -1.1 87,422 + A4249_RS00525 0.44 +0.1 87,423 - A4249_RS00525 0.44 -1.0 87,713 + A4249_RS00525 0.82 +0.2 87,713 + A4249_RS00525 0.82 +0.3 87,714 - A4249_RS00525 0.82 -0.2 87,714 - A4249_RS00525 0.82 +0.1 87,823 + +0.8 87,828 + -0.5 87,828 + +0.4 87,829 - +0.1 87,984 + -0.6 88,000 + +0.3 88,001 - +0.2 88,001 - +0.2 88,001 - -0.3 88,001 - -0.2 88,001 - +0.3 88,004 + +0.2 88,004 + +0.0 88,004 + +1.4 88,004 + -0.1 88,004 + +0.8 88,004 + +0.4 88,004 + +0.3 88,004 + +0.4 88,004 + -0.6 88,004 + +0.3 88,004 + +1.9 88,004 + -0.5 88,004 + -0.5 88,004 + -0.7 88,004 + -0.3 88,004 + -0.7 88,004 + -0.1 88,005 - -1.0 88,005 - +1.4 88,005 - +0.0 88,005 - +1.5 88,005 - +0.4 88,005 - -0.6 88,005 - +0.2 88,005 - +0.8 88,005 - +0.2 88,005 - +0.1 88,010 + -1.3 88,010 + -0.1 88,010 + -0.0 88,011 - +0.0 88,011 - +0.6 88,109 + -0.4 88,109 + +1.4 88,109 + +1.1 88,109 + -0.4 88,109 + +0.4 88,109 + -1.4 88,109 + +1.5 88,109 + +0.6 88,109 + +0.2 88,110 - -0.1 88,110 - -0.4 88,110 - +0.9 88,110 - +0.1 88,110 - -0.6 88,110 - +1.4 88,110 - +1.1 88,110 - +0.6 88,229 + A4249_RS00530 0.16 -0.9 88,229 + A4249_RS00530 0.16 -0.1 88,229 + A4249_RS00530 0.16 +1.8 88,229 + A4249_RS00530 0.16 +1.0 88,229 + A4249_RS00530 0.16 -2.8 88,229 + A4249_RS00530 0.16 +0.9 88,230 - A4249_RS00530 0.16 -0.1 88,230 - A4249_RS00530 0.16 +0.7 88,230 - A4249_RS00530 0.16 +0.2 88,230 - A4249_RS00530 0.16 +0.7 88,230 - A4249_RS00530 0.16 -1.4 88,230 - A4249_RS00530 0.16 -1.2 88,230 - A4249_RS00530 0.16 +0.1 88,292 + A4249_RS00530 0.20 -0.3 88,292 + A4249_RS00530 0.20 -0.5 88,292 + A4249_RS00530 0.20 +0.3 88,292 + A4249_RS00530 0.20 -0.6 88,292 + A4249_RS00530 0.20 +0.5 88,292 + A4249_RS00530 0.20 -0.7 88,292 + A4249_RS00530 0.20 -0.2 88,292 + A4249_RS00530 0.20 -1.0 88,292 + A4249_RS00530 0.20 -1.2 88,293 - A4249_RS00530 0.20 -0.7 88,293 - A4249_RS00530 0.20 +1.0 88,293 - A4249_RS00530 0.20 -0.0 88,293 - A4249_RS00530 0.20 -0.7 88,293 - A4249_RS00530 0.20 +0.2 88,293 - A4249_RS00530 0.20 -0.1 88,470 - A4249_RS00530 0.33 +0.4 88,470 - A4249_RS00530 0.33 -0.4 88,470 - A4249_RS00530 0.33 -0.1 88,487 + A4249_RS00530 0.35 +0.7 88,487 + A4249_RS00530 0.35 +0.2 88,488 - A4249_RS00530 0.35 -0.5 88,488 - A4249_RS00530 0.35 +2.0 88,488 - A4249_RS00530 0.35 +1.1 88,488 - A4249_RS00530 0.35 +0.8 88,488 - A4249_RS00530 0.35 +0.2 88,488 - A4249_RS00530 0.35 -2.8 88,488 - A4249_RS00530 0.35 +0.1 88,511 + A4249_RS00530 0.36 +0.2 88,613 + A4249_RS00530 0.44 +0.2 88,614 - A4249_RS00530 0.44 -0.9 88,737 - A4249_RS00530 0.53 +2.1 88,793 + A4249_RS00530 0.57 -0.9 88,793 + A4249_RS00530 0.57 -0.4 88,830 + A4249_RS00530 0.60 -0.4 88,831 - A4249_RS00530 0.60 -0.6 88,910 + A4249_RS00530 0.65 +0.4 88,910 + A4249_RS00530 0.65 +0.5 88,910 + A4249_RS00530 0.65 -2.6 88,910 + A4249_RS00530 0.65 -0.1 88,911 - A4249_RS00530 0.66 +0.1 88,911 - A4249_RS00530 0.66 +0.3 88,931 + A4249_RS00530 0.67 +0.5 88,932 - A4249_RS00530 0.67 +0.5 89,013 - A4249_RS00530 0.73 +0.6 89,013 - A4249_RS00530 0.73 -0.5 89,045 + A4249_RS00530 0.75 -0.9 89,045 + A4249_RS00530 0.75 -0.8 89,045 + A4249_RS00530 0.75 +0.3 89,045 + A4249_RS00530 0.75 -0.4 89,045 + A4249_RS00530 0.75 +0.9 89,045 + A4249_RS00530 0.75 +1.2 89,045 + A4249_RS00530 0.75 -1.4 89,046 - A4249_RS00530 0.75 -0.3 89,046 - A4249_RS00530 0.75 +1.1 89,046 - A4249_RS00530 0.75 +0.6 89,046 - A4249_RS00530 0.75 +0.6 89,046 - A4249_RS00530 0.75 +0.3 89,081 + A4249_RS00530 0.78 -0.4 89,082 - A4249_RS00530 0.78 -0.3 89,082 - A4249_RS00530 0.78 -0.5 89,123 + A4249_RS00530 0.81 -0.6 89,124 - A4249_RS00530 0.81 -0.3 89,164 + A4249_RS00530 0.84 +1.0 89,164 + A4249_RS00530 0.84 -1.0 89,165 - A4249_RS00530 0.84 -1.1 89,189 + A4249_RS00530 0.86 +0.9 89,189 + A4249_RS00530 0.86 +0.9 89,189 + A4249_RS00530 0.86 +1.0 89,189 + A4249_RS00530 0.86 -0.7 89,190 - A4249_RS00530 0.86 -0.2 89,190 - A4249_RS00530 0.86 -0.7 89,246 + +0.4 89,246 + +0.6 89,246 + +0.6 89,246 + +0.1 89,246 + -0.4 89,246 + +1.0 89,246 + +0.4 89,246 + +0.7 89,246 + -0.1 89,246 + -0.1 89,247 - -0.1 89,247 - +0.2 89,247 - +0.8 89,247 - +0.2 89,247 - +1.1 89,291 + -0.7 89,291 + +0.5 89,291 + -1.4 89,291 + -0.1 89,291 + -0.6 89,291 + +0.0 89,291 + -1.2 89,292 - +0.2 89,292 - -0.0 89,292 - +0.7 89,514 + +0.2 89,625 + -0.2 89,625 + +0.1 89,625 + +0.0 89,625 + -0.6 89,626 - +0.7 89,626 - +1.2 89,626 - +0.3 89,626 - -0.2 89,626 - +1.2 89,626 - -0.6 89,626 - -0.2
Or see this region's nucleotide sequence