Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS17000 and A4249_RS00065 are separated by 340 nucleotides A4249_RS00065 and A4249_RS00070 overlap by 4 nucleotides A4249_RS00070 and A4249_RS00075 are separated by 37 nucleotides A4249_RS00075 and A4249_RS00080 are separated by 39 nucleotides A4249_RS00080 and A4249_RS00085 are separated by 22 nucleotides
A4249_RS17000: A4249_RS17000 - hypothetical protein, at 11,142 to 11,201
_RS17000
A4249_RS00065: A4249_RS00065 - hypothetical protein, at 11,542 to 11,949
_RS00065
A4249_RS00070: A4249_RS00070 - helix-turn-helix transcriptional regulator, at 11,946 to 12,146
_RS00070
A4249_RS00075: A4249_RS00075 - alpha/beta hydrolase, at 12,184 to 13,131
_RS00075
A4249_RS00080: A4249_RS00080 - DUF3298 and DUF4163 domain-containing protein, at 13,171 to 13,995
_RS00080
A4249_RS00085: A4249_RS00085 - UbiA family prenyltransferase, at 14,018 to 15,049
_RS00085
Position (kb) 12
13
14 Strain fitness (log2 ratio) -2
-1
0
1
2 at 11.280 kb on + strand at 11.346 kb on + strand at 11.347 kb on - strand at 11.347 kb on - strand at 11.347 kb on - strand at 11.353 kb on + strand at 11.354 kb on - strand at 11.541 kb on + strand at 11.542 kb on - strand at 11.584 kb on + strand, within A4249_RS00065 at 11.584 kb on + strand, within A4249_RS00065 at 11.595 kb on + strand, within A4249_RS00065 at 11.595 kb on + strand, within A4249_RS00065 at 11.595 kb on + strand, within A4249_RS00065 at 11.596 kb on - strand, within A4249_RS00065 at 11.596 kb on - strand, within A4249_RS00065 at 11.596 kb on - strand, within A4249_RS00065 at 11.617 kb on + strand, within A4249_RS00065 at 11.617 kb on + strand, within A4249_RS00065 at 11.617 kb on + strand, within A4249_RS00065 at 11.617 kb on + strand, within A4249_RS00065 at 11.618 kb on - strand, within A4249_RS00065 at 11.618 kb on - strand, within A4249_RS00065 at 11.618 kb on - strand, within A4249_RS00065 at 11.618 kb on - strand, within A4249_RS00065 at 11.618 kb on - strand, within A4249_RS00065 at 11.631 kb on + strand, within A4249_RS00065 at 11.673 kb on + strand, within A4249_RS00065 at 11.673 kb on + strand, within A4249_RS00065 at 11.674 kb on - strand, within A4249_RS00065 at 11.871 kb on + strand, within A4249_RS00065 at 11.871 kb on + strand, within A4249_RS00065 at 11.871 kb on + strand, within A4249_RS00065 at 11.872 kb on - strand, within A4249_RS00065 at 11.911 kb on + strand at 11.911 kb on + strand at 11.911 kb on + strand at 11.911 kb on + strand at 11.911 kb on + strand at 11.912 kb on - strand at 11.912 kb on - strand at 11.912 kb on - strand at 11.912 kb on - strand at 11.912 kb on - strand at 11.912 kb on - strand at 11.912 kb on - strand at 11.912 kb on - strand at 12.168 kb on - strand at 12.547 kb on + strand, within A4249_RS00075 at 12.547 kb on + strand, within A4249_RS00075 at 12.547 kb on + strand, within A4249_RS00075 at 12.547 kb on + strand, within A4249_RS00075 at 12.548 kb on - strand, within A4249_RS00075 at 12.548 kb on - strand, within A4249_RS00075 at 12.548 kb on - strand, within A4249_RS00075 at 12.808 kb on + strand, within A4249_RS00075 at 12.955 kb on + strand, within A4249_RS00075 at 12.955 kb on + strand, within A4249_RS00075 at 12.955 kb on + strand, within A4249_RS00075 at 12.956 kb on - strand, within A4249_RS00075 at 13.018 kb on + strand, within A4249_RS00075 at 13.018 kb on + strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.232 kb on + strand at 13.298 kb on + strand, within A4249_RS00080 at 13.314 kb on - strand, within A4249_RS00080 at 13.766 kb on + strand, within A4249_RS00080 at 13.766 kb on + strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.832 kb on + strand, within A4249_RS00080 at 13.832 kb on + strand, within A4249_RS00080 at 13.850 kb on + strand, within A4249_RS00080 at 13.850 kb on + strand, within A4249_RS00080 at 13.851 kb on - strand, within A4249_RS00080
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 11,280 + +0.4 11,346 + -0.8 11,347 - -0.2 11,347 - -0.4 11,347 - -0.0 11,353 + -1.2 11,354 - +0.4 11,541 + +1.4 11,542 - -0.1 11,584 + A4249_RS00065 0.10 +1.8 11,584 + A4249_RS00065 0.10 -2.2 11,595 + A4249_RS00065 0.13 +0.8 11,595 + A4249_RS00065 0.13 +0.6 11,595 + A4249_RS00065 0.13 +0.9 11,596 - A4249_RS00065 0.13 +1.7 11,596 - A4249_RS00065 0.13 -1.1 11,596 - A4249_RS00065 0.13 +0.9 11,617 + A4249_RS00065 0.18 -0.4 11,617 + A4249_RS00065 0.18 +0.5 11,617 + A4249_RS00065 0.18 +0.3 11,617 + A4249_RS00065 0.18 -0.1 11,618 - A4249_RS00065 0.19 -1.2 11,618 - A4249_RS00065 0.19 -0.3 11,618 - A4249_RS00065 0.19 +1.0 11,618 - A4249_RS00065 0.19 +1.6 11,618 - A4249_RS00065 0.19 -0.4 11,631 + A4249_RS00065 0.22 -0.1 11,673 + A4249_RS00065 0.32 +0.5 11,673 + A4249_RS00065 0.32 -0.0 11,674 - A4249_RS00065 0.32 -1.1 11,871 + A4249_RS00065 0.81 +0.4 11,871 + A4249_RS00065 0.81 +1.1 11,871 + A4249_RS00065 0.81 -0.2 11,872 - A4249_RS00065 0.81 -0.3 11,911 + -0.4 11,911 + +0.3 11,911 + +0.2 11,911 + -0.5 11,911 + -0.0 11,912 - -0.4 11,912 - -0.9 11,912 - +0.1 11,912 - -1.6 11,912 - +0.2 11,912 - +0.5 11,912 - +1.0 11,912 - -0.4 12,168 - -1.9 12,547 + A4249_RS00075 0.38 +0.6 12,547 + A4249_RS00075 0.38 +0.5 12,547 + A4249_RS00075 0.38 -0.5 12,547 + A4249_RS00075 0.38 +1.4 12,548 - A4249_RS00075 0.38 +0.8 12,548 - A4249_RS00075 0.38 -0.1 12,548 - A4249_RS00075 0.38 -0.2 12,808 + A4249_RS00075 0.66 -0.0 12,955 + A4249_RS00075 0.81 +0.1 12,955 + A4249_RS00075 0.81 +0.4 12,955 + A4249_RS00075 0.81 -0.4 12,956 - A4249_RS00075 0.81 +0.0 13,018 + A4249_RS00075 0.88 +0.9 13,018 + A4249_RS00075 0.88 -0.4 13,019 - A4249_RS00075 0.88 +0.2 13,019 - A4249_RS00075 0.88 +0.8 13,019 - A4249_RS00075 0.88 -0.9 13,019 - A4249_RS00075 0.88 +1.0 13,232 + -0.4 13,298 + A4249_RS00080 0.15 -0.5 13,314 - A4249_RS00080 0.17 +0.6 13,766 + A4249_RS00080 0.72 -1.4 13,766 + A4249_RS00080 0.72 +1.0 13,767 - A4249_RS00080 0.72 -0.7 13,767 - A4249_RS00080 0.72 +0.2 13,767 - A4249_RS00080 0.72 -0.1 13,767 - A4249_RS00080 0.72 -0.6 13,767 - A4249_RS00080 0.72 -1.2 13,767 - A4249_RS00080 0.72 -0.2 13,832 + A4249_RS00080 0.80 +0.2 13,832 + A4249_RS00080 0.80 +1.1 13,850 + A4249_RS00080 0.82 +1.0 13,850 + A4249_RS00080 0.82 +0.5 13,851 - A4249_RS00080 0.82 +0.3
Or see this region's nucleotide sequence