Experiment: WM_JK45
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fruB and fruB overlap by 1 nucleotides fruB and fruA are separated by 16 nucleotides
JDDGAC_27395: fruB - fused PTS fructose transporter subunit IIA/HPr protein, at 5,262,534 to 5,263,664
fruB
JDDGAC_27400: fruB - fused PTS fructose transporter subunit IIA/HPr protein, at 5,263,664 to 5,264,602
fruB
JDDGAC_27405: fruA - PTS fructose transporter subunit IIBC, at 5,264,619 to 5,266,310
fruA
Position (kb) 5263
5264
5265 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5262.704 kb on + strand, within fruB at 5262.704 kb on + strand, within fruB at 5262.705 kb on - strand, within fruB at 5262.710 kb on + strand, within fruB at 5262.808 kb on + strand, within fruB at 5262.814 kb on - strand, within fruB at 5262.827 kb on + strand, within fruB at 5263.481 kb on + strand, within fruB at 5263.481 kb on + strand, within fruB at 5263.481 kb on + strand, within fruB at 5263.482 kb on - strand, within fruB at 5263.684 kb on + strand at 5263.693 kb on + strand at 5263.810 kb on - strand, within fruB at 5263.810 kb on - strand, within fruB at 5263.920 kb on + strand, within fruB at 5263.939 kb on + strand, within fruB at 5263.945 kb on + strand, within fruB at 5263.945 kb on + strand, within fruB at 5264.137 kb on + strand, within fruB at 5264.407 kb on - strand, within fruB at 5264.431 kb on + strand, within fruB at 5264.450 kb on + strand, within fruB at 5264.520 kb on + strand at 5264.617 kb on + strand at 5264.617 kb on + strand at 5264.618 kb on - strand at 5264.645 kb on + strand at 5264.646 kb on - strand at 5264.667 kb on + strand at 5264.667 kb on + strand at 5264.668 kb on - strand at 5264.880 kb on + strand, within fruA at 5264.936 kb on - strand, within fruA at 5264.936 kb on - strand, within fruA at 5265.149 kb on + strand, within fruA at 5265.159 kb on + strand, within fruA at 5265.160 kb on - strand, within fruA at 5265.275 kb on + strand, within fruA at 5265.298 kb on - strand, within fruA at 5265.324 kb on + strand, within fruA at 5265.324 kb on + strand, within fruA at 5265.325 kb on - strand, within fruA at 5265.325 kb on - strand, within fruA at 5265.396 kb on - strand, within fruA at 5265.481 kb on - strand, within fruA at 5265.482 kb on + strand, within fruA
Per-strain Table
Position Strand Gene LocusTag Fraction WM_JK45 remove 5,262,704 + fruB JDDGAC_27395 0.15 +1.2 5,262,704 + fruB JDDGAC_27395 0.15 +0.1 5,262,705 - fruB JDDGAC_27395 0.15 -2.0 5,262,710 + fruB JDDGAC_27395 0.16 -0.3 5,262,808 + fruB JDDGAC_27395 0.24 +0.3 5,262,814 - fruB JDDGAC_27395 0.25 +0.2 5,262,827 + fruB JDDGAC_27395 0.26 +0.8 5,263,481 + fruB JDDGAC_27395 0.84 +1.2 5,263,481 + fruB JDDGAC_27395 0.84 -1.1 5,263,481 + fruB JDDGAC_27395 0.84 -0.4 5,263,482 - fruB JDDGAC_27395 0.84 -1.4 5,263,684 + -2.6 5,263,693 + -0.2 5,263,810 - fruB JDDGAC_27400 0.16 +1.3 5,263,810 - fruB JDDGAC_27400 0.16 +0.1 5,263,920 + fruB JDDGAC_27400 0.27 +1.0 5,263,939 + fruB JDDGAC_27400 0.29 +1.2 5,263,945 + fruB JDDGAC_27400 0.30 +0.6 5,263,945 + fruB JDDGAC_27400 0.30 -2.3 5,264,137 + fruB JDDGAC_27400 0.50 -0.2 5,264,407 - fruB JDDGAC_27400 0.79 +0.5 5,264,431 + fruB JDDGAC_27400 0.82 -1.7 5,264,450 + fruB JDDGAC_27400 0.84 -1.5 5,264,520 + -2.5 5,264,617 + +0.6 5,264,617 + +0.6 5,264,618 - +1.6 5,264,645 + -0.3 5,264,646 - -1.8 5,264,667 + +0.6 5,264,667 + +0.0 5,264,668 - -0.1 5,264,880 + fruA JDDGAC_27405 0.15 -1.5 5,264,936 - fruA JDDGAC_27405 0.19 +1.2 5,264,936 - fruA JDDGAC_27405 0.19 +0.6 5,265,149 + fruA JDDGAC_27405 0.31 +1.1 5,265,159 + fruA JDDGAC_27405 0.32 -0.2 5,265,160 - fruA JDDGAC_27405 0.32 -0.4 5,265,275 + fruA JDDGAC_27405 0.39 -0.5 5,265,298 - fruA JDDGAC_27405 0.40 +0.2 5,265,324 + fruA JDDGAC_27405 0.42 -0.5 5,265,324 + fruA JDDGAC_27405 0.42 +0.4 5,265,325 - fruA JDDGAC_27405 0.42 -0.8 5,265,325 - fruA JDDGAC_27405 0.42 +1.0 5,265,396 - fruA JDDGAC_27405 0.46 -2.1 5,265,481 - fruA JDDGAC_27405 0.51 -1.0 5,265,482 + fruA JDDGAC_27405 0.51 -3.4
Or see this region's nucleotide sequence