Strain Fitness in Escherichia coli ECRC98 around JDDGAC_17625

Experiment: WM_JK45

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_JK45
3,342,969	+				+0.1
3,342,970	-				-3.0
3,343,027	+				+0.7
3,343,027	+				+2.7
3,343,028	-				+0.3
3,343,028	-				+0.8
3,343,029	+				-0.6
3,343,029	+				-0.0
3,343,029	+				+0.7
3,343,029	+				-0.1
3,343,029	+				-0.2
3,343,030	-				+0.3
3,343,030	-				+0.4
3,343,030	-				-0.7
3,343,030	-				+0.1
3,343,165	+	fabY	JDDGAC_17620	0.21	+1.2
3,343,210	+	fabY	JDDGAC_17620	0.26	+0.2
3,343,287	-	fabY	JDDGAC_17620	0.34	+0.4
3,343,306	+	fabY	JDDGAC_17620	0.36	+0.6
3,343,307	-	fabY	JDDGAC_17620	0.36	-0.1
3,343,343	-	fabY	JDDGAC_17620	0.40	+0.0
3,343,364	-	fabY	JDDGAC_17620	0.42	-0.1
3,343,365	+	fabY	JDDGAC_17620	0.42	+1.7
3,343,365	+	fabY	JDDGAC_17620	0.42	-0.9
3,343,366	-	fabY	JDDGAC_17620	0.42	+0.9
3,343,366	-	fabY	JDDGAC_17620	0.42	+2.0
3,343,366	-	fabY	JDDGAC_17620	0.42	+0.3
3,343,406	-	fabY	JDDGAC_17620	0.46	+2.1
3,343,414	-	fabY	JDDGAC_17620	0.47	+0.1
3,343,459	+	fabY	JDDGAC_17620	0.52	-0.9
3,343,484	-	fabY	JDDGAC_17620	0.55	+0.3
3,343,484	-	fabY	JDDGAC_17620	0.55	-0.3
3,343,588	+	fabY	JDDGAC_17620	0.66	-1.1
3,343,656	-	fabY	JDDGAC_17620	0.73	-0.5
3,343,690	+	fabY	JDDGAC_17620	0.77	+0.4
3,343,720	+	fabY	JDDGAC_17620	0.80	+0.7
3,343,723	+	fabY	JDDGAC_17620	0.80	+1.4
3,343,723	+	fabY	JDDGAC_17620	0.80	-2.0
3,343,723	+	fabY	JDDGAC_17620	0.80	-0.3
3,343,723	+	fabY	JDDGAC_17620	0.80	-0.8
3,343,725	+	fabY	JDDGAC_17620	0.80	+0.2
3,343,726	-	fabY	JDDGAC_17620	0.80	-0.3
3,343,726	-	fabY	JDDGAC_17620	0.80	-1.2
3,343,834	+				+0.4
3,343,835	-				+0.4
3,343,835	-				-1.4
3,343,860	+				+0.3
3,343,860	+				+0.9
3,343,905	+				-0.5
3,343,906	-				+0.3
3,343,906	-				-0.1
3,343,906	-				-0.2
3,343,909	+				-1.5
3,343,909	+				-0.3
3,343,910	-				+0.1
3,343,910	-				+0.2
3,343,910	-				+0.5
3,343,916	-				+1.2
3,343,958	-				-0.5
3,343,958	-				+0.7
3,344,069	+	dtd	JDDGAC_17625	0.26	-0.1
3,344,069	+	dtd	JDDGAC_17625	0.26	+1.3
3,344,070	-	dtd	JDDGAC_17625	0.26	-0.1
3,344,075	+	dtd	JDDGAC_17625	0.28	+0.1
3,344,075	+	dtd	JDDGAC_17625	0.28	-0.7
3,344,075	+	dtd	JDDGAC_17625	0.28	+0.0
3,344,075	+	dtd	JDDGAC_17625	0.28	+1.7
3,344,075	+	dtd	JDDGAC_17625	0.28	+0.8
3,344,075	+	dtd	JDDGAC_17625	0.28	-0.7
3,344,076	-	dtd	JDDGAC_17625	0.28	+0.6
3,344,076	-	dtd	JDDGAC_17625	0.28	+0.8
3,344,076	-	dtd	JDDGAC_17625	0.28	-2.0
3,344,076	-	dtd	JDDGAC_17625	0.28	+0.0
3,344,076	-	dtd	JDDGAC_17625	0.28	-0.7
3,344,077	+	dtd	JDDGAC_17625	0.28	+0.1
3,344,077	+	dtd	JDDGAC_17625	0.28	+0.9
3,344,078	-	dtd	JDDGAC_17625	0.28	+0.1
3,344,078	-	dtd	JDDGAC_17625	0.28	-1.8
3,344,140	-	dtd	JDDGAC_17625	0.42	-0.3
3,344,226	+	dtd	JDDGAC_17625	0.62	+0.9
3,344,302	+	dtd	JDDGAC_17625	0.79	+0.5
3,344,380	+				-0.3
3,344,381	-				-0.1
3,344,438	-				+1.0
3,344,480	+	yihY	JDDGAC_17630	0.11	-0.1
3,344,481	-	yihY	JDDGAC_17630	0.11	+1.0
3,344,481	-	yihY	JDDGAC_17630	0.11	+1.7
3,344,481	-	yihY	JDDGAC_17630	0.11	-0.7
3,344,494	+	yihY	JDDGAC_17630	0.12	+1.0
3,344,494	+	yihY	JDDGAC_17630	0.12	-0.0
3,344,536	+	yihY	JDDGAC_17630	0.17	-1.0
3,344,567	+	yihY	JDDGAC_17630	0.21	+0.2
3,344,658	-	yihY	JDDGAC_17630	0.31	+0.2
3,344,671	+	yihY	JDDGAC_17630	0.32	-0.7
3,344,671	+	yihY	JDDGAC_17630	0.32	+0.5
3,344,774	-	yihY	JDDGAC_17630	0.44	-0.8
3,344,908	+	yihY	JDDGAC_17630	0.60	+0.5
3,344,908	+	yihY	JDDGAC_17630	0.60	+1.1
3,344,908	+	yihY	JDDGAC_17630	0.60	-0.9
3,344,992	+	yihY	JDDGAC_17630	0.69	-0.5
3,345,002	+	yihY	JDDGAC_17630	0.70	+1.2
3,345,003	-	yihY	JDDGAC_17630	0.70	+1.5
3,345,039	-	yihY	JDDGAC_17630	0.75	-0.1
3,345,049	-	yihY	JDDGAC_17630	0.76	-1.1
3,345,049	-	yihY	JDDGAC_17630	0.76	+2.3
3,345,121	-	yihY	JDDGAC_17630	0.84	+0.0
3,345,121	-	yihY	JDDGAC_17630	0.84	+0.1
3,345,139	+	yihY	JDDGAC_17630	0.86	-0.1
3,345,150	-	yihY	JDDGAC_17630	0.87	+0.7
3,345,167	+	yihY	JDDGAC_17630	0.89	-0.3
3,345,167	+	yihY	JDDGAC_17630	0.89	-0.8
3,345,168	-	yihY	JDDGAC_17630	0.89	-0.8
3,345,168	-	yihY	JDDGAC_17630	0.89	+1.0
3,345,213	+				+0.4
3,345,255	+				+0.2
3,345,255	+				+1.0
3,345,276	+				-0.2
3,345,277	-				+0.0
3,345,277	-				-0.3
3,345,316	+	yihX	JDDGAC_17635	0.10	+0.3
3,345,332	-	yihX	JDDGAC_17635	0.13	+0.1
3,345,342	-	yihX	JDDGAC_17635	0.15	-0.0
3,345,343	+	yihX	JDDGAC_17635	0.15	-0.2
3,345,343	+	yihX	JDDGAC_17635	0.15	-2.3
3,345,343	+	yihX	JDDGAC_17635	0.15	-0.6
3,345,344	-	yihX	JDDGAC_17635	0.15	-0.4
3,345,344	-	yihX	JDDGAC_17635	0.15	-0.7
3,345,344	-	yihX	JDDGAC_17635	0.15	+0.4
3,345,344	-	yihX	JDDGAC_17635	0.15	-0.9