Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05170 and A4249_RS16510 overlap by 4 nucleotides A4249_RS16510 and A4249_RS05180 overlap by 4 nucleotides
A4249_RS05170: A4249_RS05170 - glycosyltransferase family 2 protein, at 1,062,821 to 1,064,245
_RS05170
A4249_RS16510: A4249_RS16510 - HEAT repeat domain-containing protein, at 1,064,242 to 1,065,303
_RS16510
A4249_RS05180: A4249_RS05180 - YaiO family outer membrane beta-barrel protein, at 1,065,300 to 1,066,361
_RS05180
Position (kb)
1064
1065
1066 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1063.424 kb on - strand, within A4249_RS05170 at 1063.424 kb on - strand, within A4249_RS05170 at 1063.425 kb on + strand, within A4249_RS05170 at 1063.425 kb on + strand, within A4249_RS05170 at 1063.539 kb on + strand, within A4249_RS05170 at 1063.539 kb on + strand, within A4249_RS05170 at 1063.539 kb on + strand, within A4249_RS05170 at 1063.540 kb on - strand, within A4249_RS05170 at 1063.654 kb on + strand, within A4249_RS05170 at 1063.654 kb on + strand, within A4249_RS05170 at 1063.654 kb on + strand, within A4249_RS05170 at 1063.654 kb on + strand, within A4249_RS05170 at 1063.840 kb on - strand, within A4249_RS05170 at 1063.840 kb on - strand, within A4249_RS05170 at 1063.878 kb on + strand, within A4249_RS05170 at 1063.878 kb on + strand, within A4249_RS05170 at 1063.878 kb on + strand, within A4249_RS05170 at 1063.878 kb on + strand, within A4249_RS05170 at 1063.879 kb on - strand, within A4249_RS05170 at 1063.879 kb on - strand, within A4249_RS05170 at 1063.879 kb on - strand, within A4249_RS05170 at 1063.879 kb on - strand, within A4249_RS05170 at 1063.905 kb on + strand, within A4249_RS05170 at 1063.905 kb on + strand, within A4249_RS05170 at 1063.906 kb on - strand, within A4249_RS05170 at 1063.906 kb on - strand, within A4249_RS05170 at 1063.906 kb on - strand, within A4249_RS05170 at 1063.906 kb on - strand, within A4249_RS05170 at 1063.906 kb on - strand, within A4249_RS05170 at 1063.906 kb on - strand, within A4249_RS05170 at 1064.031 kb on + strand, within A4249_RS05170 at 1064.031 kb on + strand, within A4249_RS05170 at 1064.032 kb on - strand, within A4249_RS05170 at 1064.032 kb on - strand, within A4249_RS05170 at 1064.032 kb on - strand, within A4249_RS05170 at 1064.032 kb on - strand, within A4249_RS05170 at 1064.032 kb on - strand, within A4249_RS05170 at 1064.032 kb on - strand, within A4249_RS05170 at 1064.073 kb on + strand, within A4249_RS05170 at 1064.073 kb on + strand, within A4249_RS05170 at 1064.074 kb on - strand, within A4249_RS05170 at 1064.152 kb on + strand at 1064.152 kb on + strand at 1064.152 kb on + strand at 1064.152 kb on + strand at 1064.152 kb on + strand at 1064.153 kb on - strand at 1064.153 kb on - strand at 1064.153 kb on - strand at 1064.153 kb on - strand at 1064.153 kb on - strand at 1064.153 kb on - strand at 1064.153 kb on - strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.154 kb on + strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.155 kb on - strand at 1064.753 kb on + strand, within A4249_RS16510 at 1064.753 kb on + strand, within A4249_RS16510 at 1064.753 kb on + strand, within A4249_RS16510 at 1064.753 kb on + strand, within A4249_RS16510 at 1064.753 kb on + strand, within A4249_RS16510 at 1064.754 kb on - strand, within A4249_RS16510 at 1064.754 kb on - strand, within A4249_RS16510 at 1064.754 kb on - strand, within A4249_RS16510 at 1064.754 kb on - strand, within A4249_RS16510 at 1064.754 kb on - strand, within A4249_RS16510 at 1065.052 kb on + strand, within A4249_RS16510 at 1065.052 kb on + strand, within A4249_RS16510 at 1065.052 kb on + strand, within A4249_RS16510 at 1065.053 kb on - strand, within A4249_RS16510 at 1065.053 kb on - strand, within A4249_RS16510 at 1065.053 kb on - strand, within A4249_RS16510 at 1065.166 kb on + strand, within A4249_RS16510 at 1065.166 kb on + strand, within A4249_RS16510 at 1065.166 kb on + strand, within A4249_RS16510 at 1065.346 kb on + strand at 1065.346 kb on + strand at 1065.347 kb on - strand at 1065.347 kb on - strand at 1065.347 kb on - strand at 1065.347 kb on - strand at 1065.347 kb on - strand at 1065.347 kb on - strand at 1065.347 kb on - strand at 1065.529 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.772 kb on + strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1065.773 kb on - strand, within A4249_RS05180 at 1066.120 kb on + strand, within A4249_RS05180 at 1066.120 kb on + strand, within A4249_RS05180 at 1066.120 kb on + strand, within A4249_RS05180 at 1066.120 kb on + strand, within A4249_RS05180 at 1066.121 kb on - strand, within A4249_RS05180 at 1066.121 kb on - strand, within A4249_RS05180 at 1066.121 kb on - strand, within A4249_RS05180 at 1066.135 kb on + strand, within A4249_RS05180 at 1066.273 kb on + strand at 1066.273 kb on + strand at 1066.273 kb on + strand at 1066.273 kb on + strand at 1066.274 kb on - strand at 1066.274 kb on - strand at 1066.274 kb on - strand at 1066.274 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,063,424 - A4249_RS05170 0.42 +1.4 1,063,424 - A4249_RS05170 0.42 -0.1 1,063,425 + A4249_RS05170 0.42 -0.1 1,063,425 + A4249_RS05170 0.42 -1.8 1,063,539 + A4249_RS05170 0.50 -0.6 1,063,539 + A4249_RS05170 0.50 -0.4 1,063,539 + A4249_RS05170 0.50 +0.2 1,063,540 - A4249_RS05170 0.50 +0.6 1,063,654 + A4249_RS05170 0.58 +1.2 1,063,654 + A4249_RS05170 0.58 -0.7 1,063,654 + A4249_RS05170 0.58 +0.1 1,063,654 + A4249_RS05170 0.58 -0.1 1,063,840 - A4249_RS05170 0.72 +0.6 1,063,840 - A4249_RS05170 0.72 -0.1 1,063,878 + A4249_RS05170 0.74 -0.1 1,063,878 + A4249_RS05170 0.74 -0.1 1,063,878 + A4249_RS05170 0.74 -0.4 1,063,878 + A4249_RS05170 0.74 -0.3 1,063,879 - A4249_RS05170 0.74 -0.5 1,063,879 - A4249_RS05170 0.74 -0.1 1,063,879 - A4249_RS05170 0.74 -0.4 1,063,879 - A4249_RS05170 0.74 -0.8 1,063,905 + A4249_RS05170 0.76 +0.3 1,063,905 + A4249_RS05170 0.76 -0.8 1,063,906 - A4249_RS05170 0.76 -0.8 1,063,906 - A4249_RS05170 0.76 -1.5 1,063,906 - A4249_RS05170 0.76 -0.0 1,063,906 - A4249_RS05170 0.76 -0.2 1,063,906 - A4249_RS05170 0.76 +1.3 1,063,906 - A4249_RS05170 0.76 +0.5 1,064,031 + A4249_RS05170 0.85 -1.0 1,064,031 + A4249_RS05170 0.85 -0.3 1,064,032 - A4249_RS05170 0.85 -0.4 1,064,032 - A4249_RS05170 0.85 +0.4 1,064,032 - A4249_RS05170 0.85 +0.1 1,064,032 - A4249_RS05170 0.85 +0.0 1,064,032 - A4249_RS05170 0.85 +0.1 1,064,032 - A4249_RS05170 0.85 -0.7 1,064,073 + A4249_RS05170 0.88 -0.6 1,064,073 + A4249_RS05170 0.88 +1.5 1,064,074 - A4249_RS05170 0.88 -1.6 1,064,152 + -1.1 1,064,152 + +0.6 1,064,152 + -0.6 1,064,152 + +0.3 1,064,152 + +0.3 1,064,153 - -0.0 1,064,153 - -0.6 1,064,153 - +1.4 1,064,153 - -0.4 1,064,153 - -0.1 1,064,153 - -0.1 1,064,153 - -0.1 1,064,154 + -0.1 1,064,154 + +0.5 1,064,154 + -0.4 1,064,154 + -0.8 1,064,154 + +0.6 1,064,154 + -0.3 1,064,154 + -0.0 1,064,154 + -1.1 1,064,154 + +0.3 1,064,154 + -0.3 1,064,154 + +0.4 1,064,154 + +0.1 1,064,154 + +0.4 1,064,154 + -0.4 1,064,154 + +0.4 1,064,154 + -0.0 1,064,154 + +0.7 1,064,154 + -0.2 1,064,154 + -0.6 1,064,154 + -0.9 1,064,154 + -0.4 1,064,154 + -0.4 1,064,154 + -0.3 1,064,154 + -0.2 1,064,154 + +1.5 1,064,155 - -2.4 1,064,155 - +0.3 1,064,155 - -0.7 1,064,155 - -0.1 1,064,155 - -0.8 1,064,155 - +1.4 1,064,155 - -0.8 1,064,155 - +0.3 1,064,155 - +0.5 1,064,155 - +0.6 1,064,155 - -0.2 1,064,155 - +0.1 1,064,155 - -0.3 1,064,155 - +0.9 1,064,155 - +0.4 1,064,155 - +0.7 1,064,155 - +1.1 1,064,155 - -0.2 1,064,155 - -0.6 1,064,155 - -0.5 1,064,155 - -0.3 1,064,155 - -0.4 1,064,155 - +0.1 1,064,155 - +0.5 1,064,155 - +0.2 1,064,155 - +0.9 1,064,155 - +1.0 1,064,753 + A4249_RS16510 0.48 +0.6 1,064,753 + A4249_RS16510 0.48 -1.9 1,064,753 + A4249_RS16510 0.48 +0.7 1,064,753 + A4249_RS16510 0.48 -0.6 1,064,753 + A4249_RS16510 0.48 -1.0 1,064,754 - A4249_RS16510 0.48 +0.3 1,064,754 - A4249_RS16510 0.48 -0.4 1,064,754 - A4249_RS16510 0.48 -0.1 1,064,754 - A4249_RS16510 0.48 +0.8 1,064,754 - A4249_RS16510 0.48 +0.1 1,065,052 + A4249_RS16510 0.76 +1.4 1,065,052 + A4249_RS16510 0.76 +1.8 1,065,052 + A4249_RS16510 0.76 +0.1 1,065,053 - A4249_RS16510 0.76 +1.9 1,065,053 - A4249_RS16510 0.76 -0.1 1,065,053 - A4249_RS16510 0.76 +1.4 1,065,166 + A4249_RS16510 0.87 -0.7 1,065,166 + A4249_RS16510 0.87 -0.2 1,065,166 + A4249_RS16510 0.87 +0.5 1,065,346 + -0.8 1,065,346 + +0.4 1,065,347 - -0.3 1,065,347 - -0.2 1,065,347 - +0.8 1,065,347 - -0.4 1,065,347 - +0.6 1,065,347 - +0.2 1,065,347 - +0.4 1,065,529 + A4249_RS05180 0.22 +0.6 1,065,772 + A4249_RS05180 0.44 -0.4 1,065,772 + A4249_RS05180 0.44 -0.5 1,065,772 + A4249_RS05180 0.44 -0.7 1,065,772 + A4249_RS05180 0.44 +0.1 1,065,772 + A4249_RS05180 0.44 -1.0 1,065,772 + A4249_RS05180 0.44 -2.4 1,065,772 + A4249_RS05180 0.44 -0.7 1,065,772 + A4249_RS05180 0.44 -0.6 1,065,773 - A4249_RS05180 0.45 -0.5 1,065,773 - A4249_RS05180 0.45 -0.2 1,065,773 - A4249_RS05180 0.45 -0.0 1,065,773 - A4249_RS05180 0.45 -0.3 1,065,773 - A4249_RS05180 0.45 +0.1 1,065,773 - A4249_RS05180 0.45 -0.7 1,065,773 - A4249_RS05180 0.45 -0.1 1,065,773 - A4249_RS05180 0.45 -0.6 1,065,773 - A4249_RS05180 0.45 -0.1 1,065,773 - A4249_RS05180 0.45 +0.9 1,065,773 - A4249_RS05180 0.45 +0.4 1,066,120 + A4249_RS05180 0.77 -1.1 1,066,120 + A4249_RS05180 0.77 -1.0 1,066,120 + A4249_RS05180 0.77 -0.9 1,066,120 + A4249_RS05180 0.77 -0.6 1,066,121 - A4249_RS05180 0.77 -0.1 1,066,121 - A4249_RS05180 0.77 +0.4 1,066,121 - A4249_RS05180 0.77 -1.1 1,066,135 + A4249_RS05180 0.79 -0.9 1,066,273 + +0.4 1,066,273 + -1.2 1,066,273 + -0.4 1,066,273 + -0.9 1,066,274 - +1.1 1,066,274 - -1.1 1,066,274 - +0.4 1,066,274 - -3.1
Or see this region's nucleotide sequence