Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16510

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS05170 and A4249_RS16510 overlap by 4 nucleotidesA4249_RS16510 and A4249_RS05180 overlap by 4 nucleotides A4249_RS05170: A4249_RS05170 - glycosyltransferase family 2 protein, at 1,062,821 to 1,064,245 _RS05170 A4249_RS16510: A4249_RS16510 - HEAT repeat domain-containing protein, at 1,064,242 to 1,065,303 _RS16510 A4249_RS05180: A4249_RS05180 - YaiO family outer membrane beta-barrel protein, at 1,065,300 to 1,066,361 _RS05180 Position (kb) 1064 1065 1066Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1063.424 kb on - strand, within A4249_RS05170at 1063.424 kb on - strand, within A4249_RS05170at 1063.425 kb on + strand, within A4249_RS05170at 1063.425 kb on + strand, within A4249_RS05170at 1063.539 kb on + strand, within A4249_RS05170at 1063.539 kb on + strand, within A4249_RS05170at 1063.539 kb on + strand, within A4249_RS05170at 1063.540 kb on - strand, within A4249_RS05170at 1063.654 kb on + strand, within A4249_RS05170at 1063.654 kb on + strand, within A4249_RS05170at 1063.654 kb on + strand, within A4249_RS05170at 1063.654 kb on + strand, within A4249_RS05170at 1063.840 kb on - strand, within A4249_RS05170at 1063.840 kb on - strand, within A4249_RS05170at 1063.878 kb on + strand, within A4249_RS05170at 1063.878 kb on + strand, within A4249_RS05170at 1063.878 kb on + strand, within A4249_RS05170at 1063.878 kb on + strand, within A4249_RS05170at 1063.879 kb on - strand, within A4249_RS05170at 1063.879 kb on - strand, within A4249_RS05170at 1063.879 kb on - strand, within A4249_RS05170at 1063.879 kb on - strand, within A4249_RS05170at 1063.905 kb on + strand, within A4249_RS05170at 1063.905 kb on + strand, within A4249_RS05170at 1063.906 kb on - strand, within A4249_RS05170at 1063.906 kb on - strand, within A4249_RS05170at 1063.906 kb on - strand, within A4249_RS05170at 1063.906 kb on - strand, within A4249_RS05170at 1063.906 kb on - strand, within A4249_RS05170at 1063.906 kb on - strand, within A4249_RS05170at 1064.031 kb on + strand, within A4249_RS05170at 1064.031 kb on + strand, within A4249_RS05170at 1064.032 kb on - strand, within A4249_RS05170at 1064.032 kb on - strand, within A4249_RS05170at 1064.032 kb on - strand, within A4249_RS05170at 1064.032 kb on - strand, within A4249_RS05170at 1064.032 kb on - strand, within A4249_RS05170at 1064.032 kb on - strand, within A4249_RS05170at 1064.073 kb on + strand, within A4249_RS05170at 1064.073 kb on + strand, within A4249_RS05170at 1064.074 kb on - strand, within A4249_RS05170at 1064.152 kb on + strandat 1064.152 kb on + strandat 1064.152 kb on + strandat 1064.152 kb on + strandat 1064.152 kb on + strandat 1064.153 kb on - strandat 1064.153 kb on - strandat 1064.153 kb on - strandat 1064.153 kb on - strandat 1064.153 kb on - strandat 1064.153 kb on - strandat 1064.153 kb on - strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.154 kb on + strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.155 kb on - strandat 1064.753 kb on + strand, within A4249_RS16510at 1064.753 kb on + strand, within A4249_RS16510at 1064.753 kb on + strand, within A4249_RS16510at 1064.753 kb on + strand, within A4249_RS16510at 1064.753 kb on + strand, within A4249_RS16510at 1064.754 kb on - strand, within A4249_RS16510at 1064.754 kb on - strand, within A4249_RS16510at 1064.754 kb on - strand, within A4249_RS16510at 1064.754 kb on - strand, within A4249_RS16510at 1064.754 kb on - strand, within A4249_RS16510at 1065.052 kb on + strand, within A4249_RS16510at 1065.052 kb on + strand, within A4249_RS16510at 1065.052 kb on + strand, within A4249_RS16510at 1065.053 kb on - strand, within A4249_RS16510at 1065.053 kb on - strand, within A4249_RS16510at 1065.053 kb on - strand, within A4249_RS16510at 1065.166 kb on + strand, within A4249_RS16510at 1065.166 kb on + strand, within A4249_RS16510at 1065.166 kb on + strand, within A4249_RS16510at 1065.346 kb on + strandat 1065.346 kb on + strandat 1065.347 kb on - strandat 1065.347 kb on - strandat 1065.347 kb on - strandat 1065.347 kb on - strandat 1065.347 kb on - strandat 1065.347 kb on - strandat 1065.347 kb on - strandat 1065.529 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.772 kb on + strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1065.773 kb on - strand, within A4249_RS05180at 1066.120 kb on + strand, within A4249_RS05180at 1066.120 kb on + strand, within A4249_RS05180at 1066.120 kb on + strand, within A4249_RS05180at 1066.120 kb on + strand, within A4249_RS05180at 1066.121 kb on - strand, within A4249_RS05180at 1066.121 kb on - strand, within A4249_RS05180at 1066.121 kb on - strand, within A4249_RS05180at 1066.135 kb on + strand, within A4249_RS05180at 1066.273 kb on + strandat 1066.273 kb on + strandat 1066.273 kb on + strandat 1066.273 kb on + strandat 1066.274 kb on - strandat 1066.274 kb on - strandat 1066.274 kb on - strandat 1066.274 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,063,424 - A4249_RS05170 0.42 +1.4
1,063,424 - A4249_RS05170 0.42 -0.1
1,063,425 + A4249_RS05170 0.42 -0.1
1,063,425 + A4249_RS05170 0.42 -1.8
1,063,539 + A4249_RS05170 0.50 -0.6
1,063,539 + A4249_RS05170 0.50 -0.4
1,063,539 + A4249_RS05170 0.50 +0.2
1,063,540 - A4249_RS05170 0.50 +0.6
1,063,654 + A4249_RS05170 0.58 +1.2
1,063,654 + A4249_RS05170 0.58 -0.7
1,063,654 + A4249_RS05170 0.58 +0.1
1,063,654 + A4249_RS05170 0.58 -0.1
1,063,840 - A4249_RS05170 0.72 +0.6
1,063,840 - A4249_RS05170 0.72 -0.1
1,063,878 + A4249_RS05170 0.74 -0.1
1,063,878 + A4249_RS05170 0.74 -0.1
1,063,878 + A4249_RS05170 0.74 -0.4
1,063,878 + A4249_RS05170 0.74 -0.3
1,063,879 - A4249_RS05170 0.74 -0.5
1,063,879 - A4249_RS05170 0.74 -0.1
1,063,879 - A4249_RS05170 0.74 -0.4
1,063,879 - A4249_RS05170 0.74 -0.8
1,063,905 + A4249_RS05170 0.76 +0.3
1,063,905 + A4249_RS05170 0.76 -0.8
1,063,906 - A4249_RS05170 0.76 -0.8
1,063,906 - A4249_RS05170 0.76 -1.5
1,063,906 - A4249_RS05170 0.76 -0.0
1,063,906 - A4249_RS05170 0.76 -0.2
1,063,906 - A4249_RS05170 0.76 +1.3
1,063,906 - A4249_RS05170 0.76 +0.5
1,064,031 + A4249_RS05170 0.85 -1.0
1,064,031 + A4249_RS05170 0.85 -0.3
1,064,032 - A4249_RS05170 0.85 -0.4
1,064,032 - A4249_RS05170 0.85 +0.4
1,064,032 - A4249_RS05170 0.85 +0.1
1,064,032 - A4249_RS05170 0.85 +0.0
1,064,032 - A4249_RS05170 0.85 +0.1
1,064,032 - A4249_RS05170 0.85 -0.7
1,064,073 + A4249_RS05170 0.88 -0.6
1,064,073 + A4249_RS05170 0.88 +1.5
1,064,074 - A4249_RS05170 0.88 -1.6
1,064,152 + -1.1
1,064,152 + +0.6
1,064,152 + -0.6
1,064,152 + +0.3
1,064,152 + +0.3
1,064,153 - -0.0
1,064,153 - -0.6
1,064,153 - +1.4
1,064,153 - -0.4
1,064,153 - -0.1
1,064,153 - -0.1
1,064,153 - -0.1
1,064,154 + -0.1
1,064,154 + +0.5
1,064,154 + -0.4
1,064,154 + -0.8
1,064,154 + +0.6
1,064,154 + -0.3
1,064,154 + -0.0
1,064,154 + -1.1
1,064,154 + +0.3
1,064,154 + -0.3
1,064,154 + +0.4
1,064,154 + +0.1
1,064,154 + +0.4
1,064,154 + -0.4
1,064,154 + +0.4
1,064,154 + -0.0
1,064,154 + +0.7
1,064,154 + -0.2
1,064,154 + -0.6
1,064,154 + -0.9
1,064,154 + -0.4
1,064,154 + -0.4
1,064,154 + -0.3
1,064,154 + -0.2
1,064,154 + +1.5
1,064,155 - -2.4
1,064,155 - +0.3
1,064,155 - -0.7
1,064,155 - -0.1
1,064,155 - -0.8
1,064,155 - +1.4
1,064,155 - -0.8
1,064,155 - +0.3
1,064,155 - +0.5
1,064,155 - +0.6
1,064,155 - -0.2
1,064,155 - +0.1
1,064,155 - -0.3
1,064,155 - +0.9
1,064,155 - +0.4
1,064,155 - +0.7
1,064,155 - +1.1
1,064,155 - -0.2
1,064,155 - -0.6
1,064,155 - -0.5
1,064,155 - -0.3
1,064,155 - -0.4
1,064,155 - +0.1
1,064,155 - +0.5
1,064,155 - +0.2
1,064,155 - +0.9
1,064,155 - +1.0
1,064,753 + A4249_RS16510 0.48 +0.6
1,064,753 + A4249_RS16510 0.48 -1.9
1,064,753 + A4249_RS16510 0.48 +0.7
1,064,753 + A4249_RS16510 0.48 -0.6
1,064,753 + A4249_RS16510 0.48 -1.0
1,064,754 - A4249_RS16510 0.48 +0.3
1,064,754 - A4249_RS16510 0.48 -0.4
1,064,754 - A4249_RS16510 0.48 -0.1
1,064,754 - A4249_RS16510 0.48 +0.8
1,064,754 - A4249_RS16510 0.48 +0.1
1,065,052 + A4249_RS16510 0.76 +1.4
1,065,052 + A4249_RS16510 0.76 +1.8
1,065,052 + A4249_RS16510 0.76 +0.1
1,065,053 - A4249_RS16510 0.76 +1.9
1,065,053 - A4249_RS16510 0.76 -0.1
1,065,053 - A4249_RS16510 0.76 +1.4
1,065,166 + A4249_RS16510 0.87 -0.7
1,065,166 + A4249_RS16510 0.87 -0.2
1,065,166 + A4249_RS16510 0.87 +0.5
1,065,346 + -0.8
1,065,346 + +0.4
1,065,347 - -0.3
1,065,347 - -0.2
1,065,347 - +0.8
1,065,347 - -0.4
1,065,347 - +0.6
1,065,347 - +0.2
1,065,347 - +0.4
1,065,529 + A4249_RS05180 0.22 +0.6
1,065,772 + A4249_RS05180 0.44 -0.4
1,065,772 + A4249_RS05180 0.44 -0.5
1,065,772 + A4249_RS05180 0.44 -0.7
1,065,772 + A4249_RS05180 0.44 +0.1
1,065,772 + A4249_RS05180 0.44 -1.0
1,065,772 + A4249_RS05180 0.44 -2.4
1,065,772 + A4249_RS05180 0.44 -0.7
1,065,772 + A4249_RS05180 0.44 -0.6
1,065,773 - A4249_RS05180 0.45 -0.5
1,065,773 - A4249_RS05180 0.45 -0.2
1,065,773 - A4249_RS05180 0.45 -0.0
1,065,773 - A4249_RS05180 0.45 -0.3
1,065,773 - A4249_RS05180 0.45 +0.1
1,065,773 - A4249_RS05180 0.45 -0.7
1,065,773 - A4249_RS05180 0.45 -0.1
1,065,773 - A4249_RS05180 0.45 -0.6
1,065,773 - A4249_RS05180 0.45 -0.1
1,065,773 - A4249_RS05180 0.45 +0.9
1,065,773 - A4249_RS05180 0.45 +0.4
1,066,120 + A4249_RS05180 0.77 -1.1
1,066,120 + A4249_RS05180 0.77 -1.0
1,066,120 + A4249_RS05180 0.77 -0.9
1,066,120 + A4249_RS05180 0.77 -0.6
1,066,121 - A4249_RS05180 0.77 -0.1
1,066,121 - A4249_RS05180 0.77 +0.4
1,066,121 - A4249_RS05180 0.77 -1.1
1,066,135 + A4249_RS05180 0.79 -0.9
1,066,273 + +0.4
1,066,273 + -1.2
1,066,273 + -0.4
1,066,273 + -0.9
1,066,274 - +1.1
1,066,274 - -1.1
1,066,274 - +0.4
1,066,274 - -3.1

Or see this region's nucleotide sequence