Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14635

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14625 and A4249_RS14630 overlap by 4 nucleotidesA4249_RS14630 and A4249_RS14635 are separated by 91 nucleotidesA4249_RS14635 and A4249_RS14640 are separated by 160 nucleotides A4249_RS14625: A4249_RS14625 - hypothetical protein, at 2,962,955 to 2,963,308 _RS14625 A4249_RS14630: A4249_RS14630 - polyhydroxyalkanoate synthesis repressor PhaR, at 2,963,305 to 2,963,934 _RS14630 A4249_RS14635: A4249_RS14635 - hemolysin III family protein, at 2,964,026 to 2,964,739 _RS14635 A4249_RS14640: A4249_RS14640 - acetyl-CoA C-acetyltransferase, at 2,964,900 to 2,966,075 _RS14640 Position (kb) 2964 2965Strain fitness (log2 ratio) -2 -1 0 1 2at 2963.029 kb on - strand, within A4249_RS14625at 2963.503 kb on - strand, within A4249_RS14630at 2963.965 kb on + strandat 2963.965 kb on + strandat 2963.965 kb on + strandat 2964.167 kb on - strand, within A4249_RS14635at 2964.168 kb on + strand, within A4249_RS14635at 2964.168 kb on + strand, within A4249_RS14635at 2964.168 kb on + strand, within A4249_RS14635at 2964.168 kb on + strand, within A4249_RS14635at 2964.168 kb on + strand, within A4249_RS14635at 2964.169 kb on - strand, within A4249_RS14635at 2964.169 kb on - strand, within A4249_RS14635at 2964.169 kb on - strand, within A4249_RS14635at 2964.169 kb on - strand, within A4249_RS14635at 2964.267 kb on + strand, within A4249_RS14635at 2964.267 kb on + strand, within A4249_RS14635at 2964.267 kb on + strand, within A4249_RS14635at 2964.267 kb on + strand, within A4249_RS14635at 2964.268 kb on - strand, within A4249_RS14635at 2964.268 kb on - strand, within A4249_RS14635at 2964.268 kb on - strand, within A4249_RS14635at 2964.268 kb on - strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.405 kb on + strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.406 kb on - strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.489 kb on + strand, within A4249_RS14635at 2964.490 kb on - strand, within A4249_RS14635at 2964.490 kb on - strand, within A4249_RS14635at 2964.490 kb on - strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.531 kb on + strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.532 kb on - strand, within A4249_RS14635at 2964.567 kb on + strand, within A4249_RS14635at 2964.567 kb on + strand, within A4249_RS14635at 2964.567 kb on + strand, within A4249_RS14635at 2964.567 kb on + strand, within A4249_RS14635at 2964.568 kb on - strand, within A4249_RS14635at 2964.568 kb on - strand, within A4249_RS14635at 2964.568 kb on - strand, within A4249_RS14635at 2964.593 kb on - strand, within A4249_RS14635at 2964.766 kb on + strandat 2964.877 kb on + strandat 2964.878 kb on - strandat 2964.878 kb on - strandat 2964.878 kb on - strandat 2965.359 kb on + strand, within A4249_RS14640at 2965.359 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.548 kb on + strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.549 kb on - strand, within A4249_RS14640at 2965.728 kb on + strand, within A4249_RS14640at 2965.728 kb on + strand, within A4249_RS14640at 2965.728 kb on + strand, within A4249_RS14640at 2965.728 kb on + strand, within A4249_RS14640at 2965.729 kb on - strand, within A4249_RS14640at 2965.729 kb on - strand, within A4249_RS14640at 2965.729 kb on - strand, within A4249_RS14640at 2965.729 kb on - strand, within A4249_RS14640at 2965.729 kb on - strand, within A4249_RS14640at 2965.729 kb on - strand, within A4249_RS14640

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,963,029 - A4249_RS14625 0.21 +0.4
2,963,503 - A4249_RS14630 0.31 -0.4
2,963,965 + +0.7
2,963,965 + -0.6
2,963,965 + +0.4
2,964,167 - A4249_RS14635 0.20 +0.7
2,964,168 + A4249_RS14635 0.20 -0.8
2,964,168 + A4249_RS14635 0.20 +0.0
2,964,168 + A4249_RS14635 0.20 -0.5
2,964,168 + A4249_RS14635 0.20 -0.0
2,964,168 + A4249_RS14635 0.20 -0.2
2,964,169 - A4249_RS14635 0.20 -0.1
2,964,169 - A4249_RS14635 0.20 +0.1
2,964,169 - A4249_RS14635 0.20 -0.9
2,964,169 - A4249_RS14635 0.20 -0.2
2,964,267 + A4249_RS14635 0.34 -1.6
2,964,267 + A4249_RS14635 0.34 -0.5
2,964,267 + A4249_RS14635 0.34 -0.4
2,964,267 + A4249_RS14635 0.34 -0.3
2,964,268 - A4249_RS14635 0.34 -0.3
2,964,268 - A4249_RS14635 0.34 -1.3
2,964,268 - A4249_RS14635 0.34 +0.3
2,964,268 - A4249_RS14635 0.34 +0.1
2,964,405 + A4249_RS14635 0.53 -0.0
2,964,405 + A4249_RS14635 0.53 -0.5
2,964,405 + A4249_RS14635 0.53 -0.6
2,964,405 + A4249_RS14635 0.53 -0.2
2,964,405 + A4249_RS14635 0.53 +0.4
2,964,405 + A4249_RS14635 0.53 +0.5
2,964,405 + A4249_RS14635 0.53 -0.4
2,964,405 + A4249_RS14635 0.53 -0.1
2,964,406 - A4249_RS14635 0.53 -0.1
2,964,406 - A4249_RS14635 0.53 +1.4
2,964,406 - A4249_RS14635 0.53 -0.4
2,964,406 - A4249_RS14635 0.53 -0.3
2,964,406 - A4249_RS14635 0.53 -0.3
2,964,406 - A4249_RS14635 0.53 -0.1
2,964,406 - A4249_RS14635 0.53 -0.1
2,964,406 - A4249_RS14635 0.53 -0.1
2,964,406 - A4249_RS14635 0.53 -0.6
2,964,489 + A4249_RS14635 0.65 -1.1
2,964,489 + A4249_RS14635 0.65 +0.3
2,964,489 + A4249_RS14635 0.65 +0.2
2,964,489 + A4249_RS14635 0.65 -0.4
2,964,489 + A4249_RS14635 0.65 +0.4
2,964,489 + A4249_RS14635 0.65 +0.2
2,964,489 + A4249_RS14635 0.65 -0.5
2,964,489 + A4249_RS14635 0.65 +0.8
2,964,490 - A4249_RS14635 0.65 +0.6
2,964,490 - A4249_RS14635 0.65 -0.2
2,964,490 - A4249_RS14635 0.65 +0.6
2,964,531 + A4249_RS14635 0.71 +0.2
2,964,531 + A4249_RS14635 0.71 -2.0
2,964,531 + A4249_RS14635 0.71 +0.2
2,964,531 + A4249_RS14635 0.71 -0.7
2,964,531 + A4249_RS14635 0.71 -0.6
2,964,531 + A4249_RS14635 0.71 +0.1
2,964,531 + A4249_RS14635 0.71 -0.1
2,964,531 + A4249_RS14635 0.71 -0.1
2,964,531 + A4249_RS14635 0.71 -0.2
2,964,531 + A4249_RS14635 0.71 -0.1
2,964,532 - A4249_RS14635 0.71 +0.1
2,964,532 - A4249_RS14635 0.71 +2.1
2,964,532 - A4249_RS14635 0.71 -0.5
2,964,532 - A4249_RS14635 0.71 -0.4
2,964,532 - A4249_RS14635 0.71 +0.5
2,964,532 - A4249_RS14635 0.71 -0.4
2,964,532 - A4249_RS14635 0.71 +0.9
2,964,532 - A4249_RS14635 0.71 -0.3
2,964,532 - A4249_RS14635 0.71 +0.3
2,964,532 - A4249_RS14635 0.71 +0.2
2,964,567 + A4249_RS14635 0.76 -0.1
2,964,567 + A4249_RS14635 0.76 +1.2
2,964,567 + A4249_RS14635 0.76 +1.8
2,964,567 + A4249_RS14635 0.76 +0.4
2,964,568 - A4249_RS14635 0.76 -1.9
2,964,568 - A4249_RS14635 0.76 -0.1
2,964,568 - A4249_RS14635 0.76 +0.6
2,964,593 - A4249_RS14635 0.79 -0.6
2,964,766 + -0.0
2,964,877 + +0.7
2,964,878 - -0.9
2,964,878 - +0.1
2,964,878 - -1.5
2,965,359 + A4249_RS14640 0.39 -1.3
2,965,359 + A4249_RS14640 0.39 -0.2
2,965,548 + A4249_RS14640 0.55 +0.1
2,965,548 + A4249_RS14640 0.55 +0.1
2,965,548 + A4249_RS14640 0.55 -0.2
2,965,548 + A4249_RS14640 0.55 -1.8
2,965,548 + A4249_RS14640 0.55 -0.1
2,965,548 + A4249_RS14640 0.55 +0.1
2,965,548 + A4249_RS14640 0.55 +0.5
2,965,548 + A4249_RS14640 0.55 -0.4
2,965,548 + A4249_RS14640 0.55 -1.0
2,965,549 - A4249_RS14640 0.55 -0.5
2,965,549 - A4249_RS14640 0.55 -0.9
2,965,549 - A4249_RS14640 0.55 -0.3
2,965,549 - A4249_RS14640 0.55 -1.8
2,965,549 - A4249_RS14640 0.55 -1.2
2,965,549 - A4249_RS14640 0.55 -0.0
2,965,549 - A4249_RS14640 0.55 -0.1
2,965,549 - A4249_RS14640 0.55 -1.5
2,965,728 + A4249_RS14640 0.70 -0.4
2,965,728 + A4249_RS14640 0.70 +0.6
2,965,728 + A4249_RS14640 0.70 -0.3
2,965,728 + A4249_RS14640 0.70 +0.4
2,965,729 - A4249_RS14640 0.70 -1.2
2,965,729 - A4249_RS14640 0.70 -0.6
2,965,729 - A4249_RS14640 0.70 -0.6
2,965,729 - A4249_RS14640 0.70 +0.2
2,965,729 - A4249_RS14640 0.70 +0.3
2,965,729 - A4249_RS14640 0.70 -0.3

Or see this region's nucleotide sequence