Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14545

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14540 and A4249_RS14545 overlap by 1 nucleotidesA4249_RS14545 and A4249_RS14550 are separated by 153 nucleotides A4249_RS14540: A4249_RS14540 - diacylglycerol kinase family protein, at 2,943,384 to 2,944,319 _RS14540 A4249_RS14545: A4249_RS14545 - metallophosphoesterase, at 2,944,319 to 2,945,170 _RS14545 A4249_RS14550: A4249_RS14550 - AMP nucleosidase, at 2,945,324 to 2,946,769 _RS14550 Position (kb) 2944 2945 2946Strain fitness (log2 ratio) -1 0 1at 2943.334 kb on + strandat 2943.334 kb on + strandat 2943.335 kb on - strandat 2943.335 kb on - strandat 2943.335 kb on - strandat 2943.335 kb on - strandat 2943.335 kb on - strandat 2943.537 kb on + strand, within A4249_RS14540at 2943.537 kb on + strand, within A4249_RS14540at 2943.537 kb on + strand, within A4249_RS14540at 2943.538 kb on - strand, within A4249_RS14540at 2943.713 kb on + strand, within A4249_RS14540at 2943.714 kb on - strand, within A4249_RS14540at 2943.741 kb on + strand, within A4249_RS14540at 2943.741 kb on + strand, within A4249_RS14540at 2943.741 kb on + strand, within A4249_RS14540at 2943.741 kb on + strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.742 kb on - strand, within A4249_RS14540at 2943.831 kb on + strand, within A4249_RS14540at 2943.831 kb on + strand, within A4249_RS14540at 2943.832 kb on - strand, within A4249_RS14540at 2943.837 kb on + strand, within A4249_RS14540at 2943.838 kb on - strand, within A4249_RS14540at 2943.925 kb on - strand, within A4249_RS14540at 2944.025 kb on + strand, within A4249_RS14540at 2944.025 kb on + strand, within A4249_RS14540at 2944.025 kb on + strand, within A4249_RS14540at 2944.026 kb on - strand, within A4249_RS14540at 2944.026 kb on - strand, within A4249_RS14540at 2944.317 kb on + strandat 2944.317 kb on + strandat 2944.317 kb on + strandat 2944.394 kb on + strandat 2944.394 kb on + strandat 2944.943 kb on + strand, within A4249_RS14545at 2944.944 kb on - strand, within A4249_RS14545at 2945.063 kb on + strand, within A4249_RS14545at 2945.064 kb on - strand, within A4249_RS14545at 2945.064 kb on - strand, within A4249_RS14545at 2945.064 kb on - strand, within A4249_RS14545at 2945.445 kb on + strandat 2945.445 kb on + strandat 2945.446 kb on - strandat 2945.446 kb on - strandat 2945.724 kb on + strand, within A4249_RS14550at 2945.725 kb on - strand, within A4249_RS14550at 2945.725 kb on - strand, within A4249_RS14550at 2945.809 kb on - strand, within A4249_RS14550at 2945.827 kb on - strand, within A4249_RS14550at 2945.968 kb on + strand, within A4249_RS14550at 2945.992 kb on - strand, within A4249_RS14550at 2945.992 kb on - strand, within A4249_RS14550at 2946.162 kb on + strand, within A4249_RS14550at 2946.162 kb on + strand, within A4249_RS14550at 2946.162 kb on + strand, within A4249_RS14550at 2946.162 kb on + strand, within A4249_RS14550at 2946.163 kb on - strand, within A4249_RS14550at 2946.163 kb on - strand, within A4249_RS14550at 2946.163 kb on - strand, within A4249_RS14550at 2946.163 kb on - strand, within A4249_RS14550

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,943,334 + -0.2
2,943,334 + -0.3
2,943,335 - +0.0
2,943,335 - -1.4
2,943,335 - -0.2
2,943,335 - -0.8
2,943,335 - +1.2
2,943,537 + A4249_RS14540 0.16 +0.8
2,943,537 + A4249_RS14540 0.16 -0.6
2,943,537 + A4249_RS14540 0.16 -0.3
2,943,538 - A4249_RS14540 0.16 -0.5
2,943,713 + A4249_RS14540 0.35 +0.9
2,943,714 - A4249_RS14540 0.35 -0.7
2,943,741 + A4249_RS14540 0.38 -0.5
2,943,741 + A4249_RS14540 0.38 +0.6
2,943,741 + A4249_RS14540 0.38 -1.2
2,943,741 + A4249_RS14540 0.38 +0.5
2,943,742 - A4249_RS14540 0.38 -1.0
2,943,742 - A4249_RS14540 0.38 -0.3
2,943,742 - A4249_RS14540 0.38 +0.3
2,943,742 - A4249_RS14540 0.38 -0.4
2,943,742 - A4249_RS14540 0.38 -1.3
2,943,742 - A4249_RS14540 0.38 -1.7
2,943,742 - A4249_RS14540 0.38 -0.4
2,943,742 - A4249_RS14540 0.38 -0.2
2,943,742 - A4249_RS14540 0.38 -0.5
2,943,831 + A4249_RS14540 0.48 -1.3
2,943,831 + A4249_RS14540 0.48 -0.2
2,943,832 - A4249_RS14540 0.48 -0.6
2,943,837 + A4249_RS14540 0.48 +0.7
2,943,838 - A4249_RS14540 0.49 +0.0
2,943,925 - A4249_RS14540 0.58 +0.0
2,944,025 + A4249_RS14540 0.68 -0.0
2,944,025 + A4249_RS14540 0.68 +0.3
2,944,025 + A4249_RS14540 0.68 -0.6
2,944,026 - A4249_RS14540 0.69 -0.4
2,944,026 - A4249_RS14540 0.69 +0.1
2,944,317 + +0.1
2,944,317 + -1.4
2,944,317 + -0.0
2,944,394 + +0.2
2,944,394 + +1.0
2,944,943 + A4249_RS14545 0.73 -0.7
2,944,944 - A4249_RS14545 0.73 +0.1
2,945,063 + A4249_RS14545 0.87 +0.6
2,945,064 - A4249_RS14545 0.87 +0.1
2,945,064 - A4249_RS14545 0.87 +0.1
2,945,064 - A4249_RS14545 0.87 -0.4
2,945,445 + +0.6
2,945,445 + -0.0
2,945,446 - -1.7
2,945,446 - -0.4
2,945,724 + A4249_RS14550 0.28 -0.2
2,945,725 - A4249_RS14550 0.28 +0.8
2,945,725 - A4249_RS14550 0.28 -0.8
2,945,809 - A4249_RS14550 0.34 +0.4
2,945,827 - A4249_RS14550 0.35 -1.1
2,945,968 + A4249_RS14550 0.45 +1.2
2,945,992 - A4249_RS14550 0.46 -0.6
2,945,992 - A4249_RS14550 0.46 +0.4
2,946,162 + A4249_RS14550 0.58 +0.8
2,946,162 + A4249_RS14550 0.58 +1.6
2,946,162 + A4249_RS14550 0.58 +1.4
2,946,162 + A4249_RS14550 0.58 -0.5
2,946,163 - A4249_RS14550 0.58 -0.2
2,946,163 - A4249_RS14550 0.58 +0.1
2,946,163 - A4249_RS14550 0.58 -0.2
2,946,163 - A4249_RS14550 0.58 +0.1

Or see this region's nucleotide sequence