Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13860 and A4249_RS13865 are separated by 116 nucleotides A4249_RS13865 and A4249_RS13870 are separated by 1 nucleotides A4249_RS13870 and A4249_RS13875 are separated by 76 nucleotides A4249_RS13875 and A4249_RS13880 are separated by 54 nucleotides
A4249_RS13860: A4249_RS13860 - hypothetical protein, at 2,798,600 to 2,798,944
_RS13860
A4249_RS13865: A4249_RS13865 - electron transfer flavoprotein subunit beta/FixA family protein, at 2,799,061 to 2,799,825
_RS13865
A4249_RS13870: A4249_RS13870 - electron transfer flavoprotein subunit alpha/FixB family protein, at 2,799,827 to 2,800,756
_RS13870
A4249_RS13875: A4249_RS13875 - DUF167 domain-containing protein, at 2,800,833 to 2,801,123
_RS13875
A4249_RS13880: A4249_RS13880 - hypothetical protein, at 2,801,178 to 2,801,378
_RS13880
Position (kb)
2799
2800
2801 Strain fitness (log2 ratio)
-1
0
1
2 at 2798.992 kb on + strand at 2798.992 kb on + strand at 2798.992 kb on + strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2800.755 kb on - strand at 2800.822 kb on + strand at 2800.823 kb on - strand at 2800.849 kb on + strand at 2800.850 kb on - strand at 2800.850 kb on - strand at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.244 kb on + strand, within A4249_RS13880 at 2801.245 kb on - strand, within A4249_RS13880 at 2801.245 kb on - strand, within A4249_RS13880 at 2801.245 kb on - strand, within A4249_RS13880 at 2801.245 kb on - strand, within A4249_RS13880 at 2801.246 kb on + strand, within A4249_RS13880 at 2801.246 kb on + strand, within A4249_RS13880 at 2801.246 kb on + strand, within A4249_RS13880 at 2801.246 kb on + strand, within A4249_RS13880 at 2801.246 kb on + strand, within A4249_RS13880 at 2801.247 kb on - strand, within A4249_RS13880
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,798,992 + -0.2 2,798,992 + +0.6 2,798,992 + -0.2 2,798,993 - -0.7 2,798,993 - -0.3 2,798,993 - -0.5 2,798,993 - +0.1 2,798,993 - -0.1 2,800,755 - +0.0 2,800,822 + -0.5 2,800,823 - +1.9 2,800,849 + +0.1 2,800,850 - +1.3 2,800,850 - +0.8 2,801,244 + A4249_RS13880 0.33 -0.1 2,801,244 + A4249_RS13880 0.33 -0.4 2,801,244 + A4249_RS13880 0.33 -1.2 2,801,244 + A4249_RS13880 0.33 -1.3 2,801,244 + A4249_RS13880 0.33 +0.1 2,801,244 + A4249_RS13880 0.33 -0.4 2,801,244 + A4249_RS13880 0.33 -0.3 2,801,244 + A4249_RS13880 0.33 -0.0 2,801,244 + A4249_RS13880 0.33 -0.8 2,801,244 + A4249_RS13880 0.33 +0.2 2,801,244 + A4249_RS13880 0.33 +1.7 2,801,244 + A4249_RS13880 0.33 +0.6 2,801,244 + A4249_RS13880 0.33 +0.5 2,801,245 - A4249_RS13880 0.33 -0.0 2,801,245 - A4249_RS13880 0.33 -0.1 2,801,245 - A4249_RS13880 0.33 -0.0 2,801,245 - A4249_RS13880 0.33 +0.4 2,801,246 + A4249_RS13880 0.34 +0.1 2,801,246 + A4249_RS13880 0.34 -0.1 2,801,246 + A4249_RS13880 0.34 -0.0 2,801,246 + A4249_RS13880 0.34 -0.2 2,801,246 + A4249_RS13880 0.34 -0.4 2,801,247 - A4249_RS13880 0.34 +0.9
Or see this region's nucleotide sequence