Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13245 and A4249_RS13250 are separated by 239 nucleotides A4249_RS13250 and A4249_RS13255 are separated by 62 nucleotides A4249_RS13255 and A4249_RS13260 are separated by 37 nucleotides
A4249_RS13245: A4249_RS13245 - outer membrane beta-barrel protein, at 2,670,537 to 2,671,694
_RS13245
A4249_RS13250: A4249_RS13250 - MaoC family dehydratase, at 2,671,934 to 2,672,401
_RS13250
A4249_RS13255: A4249_RS13255 - threonine/serine dehydratase, at 2,672,464 to 2,673,444
_RS13255
A4249_RS13260: A4249_RS13260 - glycerol kinase GlpK, at 2,673,482 to 2,675,011
_RS13260
Position (kb)
2672
2673
2674 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2671.695 kb on - strand at 2671.726 kb on - strand at 2671.728 kb on - strand at 2671.728 kb on - strand at 2671.728 kb on - strand at 2671.731 kb on - strand at 2671.751 kb on - strand at 2671.761 kb on + strand at 2671.761 kb on + strand at 2671.775 kb on + strand at 2671.775 kb on + strand at 2671.776 kb on - strand at 2671.776 kb on - strand at 2671.776 kb on - strand at 2671.778 kb on - strand at 2671.838 kb on + strand at 2671.838 kb on + strand at 2671.838 kb on + strand at 2671.839 kb on - strand at 2671.839 kb on - strand at 2671.869 kb on - strand at 2671.869 kb on - strand at 2671.869 kb on - strand at 2671.872 kb on + strand at 2671.872 kb on + strand at 2671.873 kb on - strand at 2671.919 kb on + strand at 2671.919 kb on + strand at 2671.919 kb on + strand at 2671.919 kb on + strand at 2671.919 kb on + strand at 2671.919 kb on + strand at 2671.919 kb on + strand at 2671.920 kb on - strand at 2671.920 kb on - strand at 2671.920 kb on - strand at 2671.920 kb on - strand at 2671.920 kb on - strand at 2671.920 kb on - strand at 2671.924 kb on + strand at 2671.924 kb on + strand at 2671.924 kb on + strand at 2671.924 kb on + strand at 2671.924 kb on + strand at 2671.924 kb on + strand at 2671.924 kb on + strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2671.925 kb on - strand at 2672.069 kb on + strand, within A4249_RS13250 at 2672.142 kb on + strand, within A4249_RS13250 at 2672.142 kb on + strand, within A4249_RS13250 at 2672.142 kb on + strand, within A4249_RS13250 at 2672.143 kb on - strand, within A4249_RS13250 at 2672.143 kb on - strand, within A4249_RS13250 at 2672.187 kb on + strand, within A4249_RS13250 at 2672.187 kb on + strand, within A4249_RS13250 at 2672.187 kb on + strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.188 kb on - strand, within A4249_RS13250 at 2672.498 kb on + strand at 2672.499 kb on - strand at 2672.499 kb on - strand at 2672.499 kb on - strand at 2673.074 kb on + strand, within A4249_RS13255 at 2673.074 kb on + strand, within A4249_RS13255 at 2673.075 kb on - strand, within A4249_RS13255 at 2673.075 kb on - strand, within A4249_RS13255 at 2673.075 kb on - strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.266 kb on + strand, within A4249_RS13255 at 2673.267 kb on - strand, within A4249_RS13255 at 2673.267 kb on - strand, within A4249_RS13255 at 2673.267 kb on - strand, within A4249_RS13255 at 2673.267 kb on - strand, within A4249_RS13255 at 2673.267 kb on - strand, within A4249_RS13255 at 2673.267 kb on - strand, within A4249_RS13255 at 2673.321 kb on + strand, within A4249_RS13255 at 2673.322 kb on - strand, within A4249_RS13255 at 2673.322 kb on - strand, within A4249_RS13255 at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.422 kb on + strand at 2673.423 kb on - strand at 2673.423 kb on - strand at 2673.423 kb on - strand at 2673.423 kb on - strand at 2673.423 kb on - strand at 2673.423 kb on - strand at 2673.423 kb on - strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.444 kb on + strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.445 kb on - strand at 2673.918 kb on - strand, within A4249_RS13260 at 2673.918 kb on - strand, within A4249_RS13260 at 2674.304 kb on + strand, within A4249_RS13260 at 2674.304 kb on + strand, within A4249_RS13260 at 2674.304 kb on + strand, within A4249_RS13260 at 2674.304 kb on + strand, within A4249_RS13260 at 2674.304 kb on + strand, within A4249_RS13260 at 2674.305 kb on - strand, within A4249_RS13260 at 2674.305 kb on - strand, within A4249_RS13260 at 2674.409 kb on + strand, within A4249_RS13260
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,671,695 - +0.4 2,671,726 - -0.4 2,671,728 - +0.1 2,671,728 - +0.1 2,671,728 - +0.4 2,671,731 - +1.4 2,671,751 - -1.7 2,671,761 + -1.1 2,671,761 + +0.4 2,671,775 + +0.8 2,671,775 + -0.2 2,671,776 - +0.1 2,671,776 - -0.6 2,671,776 - -0.4 2,671,778 - -0.2 2,671,838 + -0.4 2,671,838 + -1.2 2,671,838 + -0.1 2,671,839 - -0.3 2,671,839 - -0.7 2,671,869 - -0.5 2,671,869 - -0.7 2,671,869 - -0.6 2,671,872 + -1.4 2,671,872 + -0.4 2,671,873 - -0.7 2,671,919 + +0.1 2,671,919 + -0.2 2,671,919 + -0.4 2,671,919 + +0.6 2,671,919 + -0.8 2,671,919 + +0.1 2,671,919 + +0.1 2,671,920 - -2.1 2,671,920 - +0.2 2,671,920 - -0.7 2,671,920 - -1.1 2,671,920 - -0.4 2,671,920 - -1.1 2,671,924 + -0.5 2,671,924 + +0.3 2,671,924 + -0.4 2,671,924 + -0.7 2,671,924 + +1.2 2,671,924 + -1.3 2,671,924 + -0.8 2,671,925 - +0.2 2,671,925 - -0.8 2,671,925 - -1.0 2,671,925 - -1.2 2,671,925 - -0.5 2,671,925 - -0.5 2,671,925 - -0.1 2,671,925 - -0.1 2,672,069 + A4249_RS13250 0.29 -0.4 2,672,142 + A4249_RS13250 0.44 -1.5 2,672,142 + A4249_RS13250 0.44 -0.1 2,672,142 + A4249_RS13250 0.44 -1.8 2,672,143 - A4249_RS13250 0.45 +1.3 2,672,143 - A4249_RS13250 0.45 +0.8 2,672,187 + A4249_RS13250 0.54 -0.3 2,672,187 + A4249_RS13250 0.54 -0.5 2,672,187 + A4249_RS13250 0.54 -0.2 2,672,188 - A4249_RS13250 0.54 -0.3 2,672,188 - A4249_RS13250 0.54 +0.0 2,672,188 - A4249_RS13250 0.54 -0.4 2,672,188 - A4249_RS13250 0.54 -0.1 2,672,188 - A4249_RS13250 0.54 +0.9 2,672,188 - A4249_RS13250 0.54 +0.2 2,672,188 - A4249_RS13250 0.54 +0.6 2,672,188 - A4249_RS13250 0.54 -1.0 2,672,188 - A4249_RS13250 0.54 +0.6 2,672,498 + -0.5 2,672,499 - +0.6 2,672,499 - -0.5 2,672,499 - -2.0 2,673,074 + A4249_RS13255 0.62 -0.3 2,673,074 + A4249_RS13255 0.62 -0.4 2,673,075 - A4249_RS13255 0.62 +0.2 2,673,075 - A4249_RS13255 0.62 +1.2 2,673,075 - A4249_RS13255 0.62 -0.4 2,673,266 + A4249_RS13255 0.82 -0.7 2,673,266 + A4249_RS13255 0.82 -0.9 2,673,266 + A4249_RS13255 0.82 -0.9 2,673,266 + A4249_RS13255 0.82 -0.0 2,673,266 + A4249_RS13255 0.82 -0.3 2,673,266 + A4249_RS13255 0.82 -0.9 2,673,266 + A4249_RS13255 0.82 +1.1 2,673,267 - A4249_RS13255 0.82 -0.8 2,673,267 - A4249_RS13255 0.82 +0.5 2,673,267 - A4249_RS13255 0.82 +0.1 2,673,267 - A4249_RS13255 0.82 +0.2 2,673,267 - A4249_RS13255 0.82 +0.2 2,673,267 - A4249_RS13255 0.82 -0.6 2,673,321 + A4249_RS13255 0.87 -0.2 2,673,322 - A4249_RS13255 0.87 +0.0 2,673,322 - A4249_RS13255 0.87 +0.0 2,673,422 + -0.1 2,673,422 + +0.1 2,673,422 + +0.2 2,673,422 + +0.5 2,673,422 + +0.2 2,673,422 + +0.3 2,673,422 + -0.1 2,673,422 + +1.0 2,673,422 + -0.1 2,673,422 + -0.7 2,673,423 - -0.4 2,673,423 - -0.9 2,673,423 - +0.0 2,673,423 - -0.0 2,673,423 - -0.2 2,673,423 - +0.1 2,673,423 - -0.9 2,673,444 + -0.5 2,673,444 + -0.5 2,673,444 + -1.0 2,673,444 + -0.5 2,673,444 + -1.3 2,673,444 + +0.2 2,673,444 + -0.5 2,673,444 + -0.5 2,673,444 + +0.2 2,673,444 + -0.5 2,673,444 + +0.2 2,673,444 + +0.6 2,673,444 + +0.4 2,673,444 + +0.4 2,673,444 + -0.8 2,673,445 - +0.1 2,673,445 - -0.5 2,673,445 - +1.2 2,673,445 - +0.2 2,673,445 - -0.4 2,673,445 - +0.8 2,673,445 - -0.6 2,673,445 - -0.3 2,673,445 - -0.2 2,673,445 - -0.9 2,673,918 - A4249_RS13260 0.28 -1.1 2,673,918 - A4249_RS13260 0.28 +0.2 2,674,304 + A4249_RS13260 0.54 +0.1 2,674,304 + A4249_RS13260 0.54 +1.8 2,674,304 + A4249_RS13260 0.54 -0.7 2,674,304 + A4249_RS13260 0.54 -0.1 2,674,304 + A4249_RS13260 0.54 -0.3 2,674,305 - A4249_RS13260 0.54 +0.3 2,674,305 - A4249_RS13260 0.54 +0.5 2,674,409 + A4249_RS13260 0.61 -0.3
Or see this region's nucleotide sequence