Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13100

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13095 and A4249_RS13100 are separated by 87 nucleotidesA4249_RS13100 and A4249_RS13105 are separated by 819 nucleotides A4249_RS13095: A4249_RS13095 - phosphoglucosamine mutase, at 2,633,587 to 2,634,936 _RS13095 A4249_RS13100: A4249_RS13100 - HEPN domain-containing protein, at 2,635,024 to 2,635,959 _RS13100 A4249_RS13105: A4249_RS13105 - RNA polymerase sigma factor, at 2,636,779 to 2,637,285 _RS13105 Position (kb) 2635 2636Strain fitness (log2 ratio) -2 -1 0 1 2at 2634.951 kb on + strandat 2634.951 kb on + strandat 2634.952 kb on - strandat 2634.952 kb on - strandat 2634.952 kb on - strandat 2634.952 kb on - strandat 2634.952 kb on - strandat 2634.952 kb on - strandat 2634.952 kb on - strandat 2634.954 kb on + strandat 2634.954 kb on + strandat 2634.954 kb on + strandat 2634.954 kb on + strandat 2634.955 kb on - strandat 2634.955 kb on - strandat 2634.955 kb on - strandat 2635.013 kb on - strandat 2635.022 kb on + strandat 2635.022 kb on + strandat 2635.022 kb on + strandat 2635.022 kb on + strandat 2635.023 kb on - strandat 2635.189 kb on + strand, within A4249_RS13100at 2635.189 kb on + strand, within A4249_RS13100at 2635.190 kb on - strand, within A4249_RS13100at 2635.190 kb on - strand, within A4249_RS13100at 2635.228 kb on + strand, within A4249_RS13100at 2635.229 kb on - strand, within A4249_RS13100at 2635.229 kb on - strand, within A4249_RS13100at 2635.291 kb on + strand, within A4249_RS13100at 2635.292 kb on - strand, within A4249_RS13100at 2635.402 kb on + strand, within A4249_RS13100at 2635.402 kb on + strand, within A4249_RS13100at 2635.402 kb on + strand, within A4249_RS13100at 2635.402 kb on + strand, within A4249_RS13100at 2635.402 kb on + strand, within A4249_RS13100at 2635.402 kb on + strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.403 kb on - strand, within A4249_RS13100at 2635.527 kb on + strand, within A4249_RS13100at 2635.527 kb on + strand, within A4249_RS13100at 2635.527 kb on + strand, within A4249_RS13100at 2635.527 kb on + strand, within A4249_RS13100at 2635.528 kb on - strand, within A4249_RS13100at 2635.528 kb on - strand, within A4249_RS13100at 2635.528 kb on - strand, within A4249_RS13100at 2635.558 kb on - strand, within A4249_RS13100at 2635.568 kb on - strand, within A4249_RS13100at 2635.568 kb on - strand, within A4249_RS13100at 2635.648 kb on + strand, within A4249_RS13100at 2635.648 kb on + strand, within A4249_RS13100at 2635.648 kb on + strand, within A4249_RS13100at 2635.648 kb on + strand, within A4249_RS13100at 2635.648 kb on + strand, within A4249_RS13100at 2635.649 kb on - strand, within A4249_RS13100at 2635.649 kb on - strand, within A4249_RS13100at 2635.661 kb on + strand, within A4249_RS13100at 2635.662 kb on - strand, within A4249_RS13100at 2635.662 kb on - strand, within A4249_RS13100at 2635.662 kb on - strand, within A4249_RS13100at 2635.678 kb on + strand, within A4249_RS13100at 2635.678 kb on + strand, within A4249_RS13100at 2635.678 kb on + strand, within A4249_RS13100at 2635.678 kb on + strand, within A4249_RS13100at 2635.679 kb on - strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.701 kb on + strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.702 kb on - strand, within A4249_RS13100at 2635.736 kb on + strand, within A4249_RS13100at 2635.736 kb on + strand, within A4249_RS13100at 2635.736 kb on + strand, within A4249_RS13100at 2635.737 kb on - strand, within A4249_RS13100at 2635.737 kb on - strand, within A4249_RS13100at 2635.737 kb on - strand, within A4249_RS13100at 2635.807 kb on + strand, within A4249_RS13100at 2635.807 kb on + strand, within A4249_RS13100at 2635.807 kb on + strand, within A4249_RS13100at 2635.807 kb on + strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.808 kb on - strand, within A4249_RS13100at 2635.822 kb on + strand, within A4249_RS13100at 2635.823 kb on - strand, within A4249_RS13100at 2635.823 kb on - strand, within A4249_RS13100at 2635.834 kb on + strand, within A4249_RS13100at 2635.835 kb on - strand, within A4249_RS13100at 2635.931 kb on + strandat 2635.931 kb on + strandat 2635.932 kb on - strandat 2635.932 kb on - strandat 2635.932 kb on - strandat 2635.957 kb on + strandat 2635.957 kb on + strandat 2635.957 kb on + strandat 2635.958 kb on - strandat 2635.958 kb on - strandat 2635.989 kb on + strandat 2635.989 kb on + strandat 2635.989 kb on + strandat 2635.989 kb on + strandat 2635.989 kb on + strandat 2635.989 kb on + strandat 2635.990 kb on - strandat 2635.990 kb on - strandat 2636.082 kb on - strandat 2636.082 kb on - strandat 2636.093 kb on + strandat 2636.093 kb on + strandat 2636.094 kb on - strandat 2636.094 kb on - strandat 2636.094 kb on - strandat 2636.119 kb on + strandat 2636.119 kb on + strandat 2636.119 kb on + strandat 2636.119 kb on + strandat 2636.119 kb on + strandat 2636.120 kb on - strandat 2636.120 kb on - strandat 2636.120 kb on - strandat 2636.120 kb on - strandat 2636.120 kb on - strandat 2636.120 kb on - strandat 2636.133 kb on + strandat 2636.133 kb on + strandat 2636.133 kb on + strandat 2636.133 kb on + strandat 2636.143 kb on + strandat 2636.143 kb on + strandat 2636.143 kb on + strandat 2636.143 kb on + strandat 2636.143 kb on + strandat 2636.144 kb on - strandat 2636.144 kb on - strandat 2636.144 kb on - strandat 2636.144 kb on - strandat 2636.144 kb on - strandat 2636.144 kb on - strandat 2636.146 kb on + strandat 2636.146 kb on + strandat 2636.147 kb on - strandat 2636.201 kb on - strandat 2636.267 kb on + strandat 2636.267 kb on + strandat 2636.267 kb on + strandat 2636.267 kb on + strandat 2636.267 kb on + strandat 2636.268 kb on - strandat 2636.268 kb on - strandat 2636.268 kb on - strandat 2636.287 kb on + strandat 2636.287 kb on + strandat 2636.287 kb on + strandat 2636.287 kb on + strandat 2636.287 kb on + strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.288 kb on - strandat 2636.317 kb on + strandat 2636.317 kb on + strandat 2636.318 kb on - strandat 2636.318 kb on - strandat 2636.318 kb on - strandat 2636.344 kb on + strandat 2636.344 kb on + strandat 2636.344 kb on + strandat 2636.344 kb on + strandat 2636.344 kb on + strandat 2636.344 kb on + strandat 2636.345 kb on - strandat 2636.345 kb on - strandat 2636.345 kb on - strandat 2636.345 kb on - strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.440 kb on + strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.441 kb on - strandat 2636.675 kb on + strandat 2636.675 kb on + strandat 2636.675 kb on + strandat 2636.676 kb on - strandat 2636.676 kb on - strandat 2636.676 kb on - strandat 2636.676 kb on - strandat 2636.725 kb on + strandat 2636.725 kb on + strandat 2636.725 kb on + strandat 2636.726 kb on - strandat 2636.726 kb on - strandat 2636.802 kb on + strandat 2636.802 kb on + strandat 2636.803 kb on - strandat 2636.803 kb on - strandat 2636.893 kb on + strand, within A4249_RS13105at 2636.893 kb on + strand, within A4249_RS13105at 2636.893 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.932 kb on + strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105at 2636.933 kb on - strand, within A4249_RS13105

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,634,951 + -0.3
2,634,951 + -0.1
2,634,952 - -1.1
2,634,952 - -0.5
2,634,952 - -0.1
2,634,952 - -0.9
2,634,952 - -0.7
2,634,952 - -0.2
2,634,952 - -0.2
2,634,954 + +1.0
2,634,954 + +0.7
2,634,954 + +0.1
2,634,954 + -0.5
2,634,955 - +0.1
2,634,955 - -1.1
2,634,955 - -0.9
2,635,013 - -1.5
2,635,022 + -1.2
2,635,022 + +0.7
2,635,022 + +1.2
2,635,022 + +0.5
2,635,023 - -0.3
2,635,189 + A4249_RS13100 0.18 +0.0
2,635,189 + A4249_RS13100 0.18 +1.2
2,635,190 - A4249_RS13100 0.18 -1.2
2,635,190 - A4249_RS13100 0.18 -0.8
2,635,228 + A4249_RS13100 0.22 -1.1
2,635,229 - A4249_RS13100 0.22 +0.4
2,635,229 - A4249_RS13100 0.22 -0.1
2,635,291 + A4249_RS13100 0.29 +0.8
2,635,292 - A4249_RS13100 0.29 -1.2
2,635,402 + A4249_RS13100 0.40 +0.8
2,635,402 + A4249_RS13100 0.40 +0.1
2,635,402 + A4249_RS13100 0.40 -0.4
2,635,402 + A4249_RS13100 0.40 +0.3
2,635,402 + A4249_RS13100 0.40 +0.8
2,635,402 + A4249_RS13100 0.40 +0.0
2,635,403 - A4249_RS13100 0.40 -0.1
2,635,403 - A4249_RS13100 0.40 +0.7
2,635,403 - A4249_RS13100 0.40 -0.6
2,635,403 - A4249_RS13100 0.40 +0.2
2,635,403 - A4249_RS13100 0.40 -0.6
2,635,403 - A4249_RS13100 0.40 -0.2
2,635,403 - A4249_RS13100 0.40 -0.7
2,635,527 + A4249_RS13100 0.54 -0.4
2,635,527 + A4249_RS13100 0.54 +0.3
2,635,527 + A4249_RS13100 0.54 -0.3
2,635,527 + A4249_RS13100 0.54 -0.1
2,635,528 - A4249_RS13100 0.54 -0.6
2,635,528 - A4249_RS13100 0.54 -0.3
2,635,528 - A4249_RS13100 0.54 +0.9
2,635,558 - A4249_RS13100 0.57 +0.6
2,635,568 - A4249_RS13100 0.58 +0.2
2,635,568 - A4249_RS13100 0.58 -0.2
2,635,648 + A4249_RS13100 0.67 +1.1
2,635,648 + A4249_RS13100 0.67 +0.4
2,635,648 + A4249_RS13100 0.67 -1.1
2,635,648 + A4249_RS13100 0.67 -0.3
2,635,648 + A4249_RS13100 0.67 +1.1
2,635,649 - A4249_RS13100 0.67 -1.1
2,635,649 - A4249_RS13100 0.67 +0.8
2,635,661 + A4249_RS13100 0.68 +0.3
2,635,662 - A4249_RS13100 0.68 -0.1
2,635,662 - A4249_RS13100 0.68 +0.1
2,635,662 - A4249_RS13100 0.68 -0.6
2,635,678 + A4249_RS13100 0.70 +0.2
2,635,678 + A4249_RS13100 0.70 -0.1
2,635,678 + A4249_RS13100 0.70 +0.9
2,635,678 + A4249_RS13100 0.70 -1.1
2,635,679 - A4249_RS13100 0.70 -1.1
2,635,701 + A4249_RS13100 0.72 -0.0
2,635,701 + A4249_RS13100 0.72 +0.2
2,635,701 + A4249_RS13100 0.72 -1.0
2,635,701 + A4249_RS13100 0.72 -0.7
2,635,701 + A4249_RS13100 0.72 -0.3
2,635,701 + A4249_RS13100 0.72 -0.4
2,635,701 + A4249_RS13100 0.72 -0.4
2,635,701 + A4249_RS13100 0.72 -0.4
2,635,701 + A4249_RS13100 0.72 -0.3
2,635,701 + A4249_RS13100 0.72 +0.3
2,635,701 + A4249_RS13100 0.72 -0.2
2,635,701 + A4249_RS13100 0.72 -0.1
2,635,701 + A4249_RS13100 0.72 -0.5
2,635,701 + A4249_RS13100 0.72 +0.2
2,635,701 + A4249_RS13100 0.72 -1.1
2,635,702 - A4249_RS13100 0.72 +0.1
2,635,702 - A4249_RS13100 0.72 +0.3
2,635,702 - A4249_RS13100 0.72 -0.9
2,635,702 - A4249_RS13100 0.72 +0.2
2,635,702 - A4249_RS13100 0.72 -0.4
2,635,702 - A4249_RS13100 0.72 -0.7
2,635,702 - A4249_RS13100 0.72 +0.2
2,635,702 - A4249_RS13100 0.72 +0.7
2,635,702 - A4249_RS13100 0.72 -1.1
2,635,702 - A4249_RS13100 0.72 +1.4
2,635,702 - A4249_RS13100 0.72 -0.3
2,635,736 + A4249_RS13100 0.76 -0.5
2,635,736 + A4249_RS13100 0.76 +0.7
2,635,736 + A4249_RS13100 0.76 -1.2
2,635,737 - A4249_RS13100 0.76 +0.4
2,635,737 - A4249_RS13100 0.76 -0.1
2,635,737 - A4249_RS13100 0.76 -0.2
2,635,807 + A4249_RS13100 0.84 -0.4
2,635,807 + A4249_RS13100 0.84 -0.8
2,635,807 + A4249_RS13100 0.84 -0.0
2,635,807 + A4249_RS13100 0.84 -0.4
2,635,808 - A4249_RS13100 0.84 +0.1
2,635,808 - A4249_RS13100 0.84 -0.1
2,635,808 - A4249_RS13100 0.84 -0.3
2,635,808 - A4249_RS13100 0.84 +0.1
2,635,808 - A4249_RS13100 0.84 -0.8
2,635,808 - A4249_RS13100 0.84 -0.5
2,635,808 - A4249_RS13100 0.84 +0.3
2,635,808 - A4249_RS13100 0.84 -0.3
2,635,822 + A4249_RS13100 0.85 -1.6
2,635,823 - A4249_RS13100 0.85 +0.0
2,635,823 - A4249_RS13100 0.85 +0.2
2,635,834 + A4249_RS13100 0.87 -0.7
2,635,835 - A4249_RS13100 0.87 +1.1
2,635,931 + -0.6
2,635,931 + +0.4
2,635,932 - -0.8
2,635,932 - -0.1
2,635,932 - -0.2
2,635,957 + -0.2
2,635,957 + +0.1
2,635,957 + +0.5
2,635,958 - -1.0
2,635,958 - +0.1
2,635,989 + +0.5
2,635,989 + -0.3
2,635,989 + -0.3
2,635,989 + +1.1
2,635,989 + +2.4
2,635,989 + -1.0
2,635,990 - -0.4
2,635,990 - +0.9
2,636,082 - +0.3
2,636,082 - +0.3
2,636,093 + -0.6
2,636,093 + +0.4
2,636,094 - -1.1
2,636,094 - -0.8
2,636,094 - +0.5
2,636,119 + -0.3
2,636,119 + -0.6
2,636,119 + -0.2
2,636,119 + +0.1
2,636,119 + -0.5
2,636,120 - -0.6
2,636,120 - +0.1
2,636,120 - +0.2
2,636,120 - -1.2
2,636,120 - -0.7
2,636,120 - -0.3
2,636,133 + +0.3
2,636,133 + -0.7
2,636,133 + +0.6
2,636,133 + -0.7
2,636,143 + +0.4
2,636,143 + -0.1
2,636,143 + +0.5
2,636,143 + +0.5
2,636,143 + -1.3
2,636,144 - +0.0
2,636,144 - -0.5
2,636,144 - +0.2
2,636,144 - +0.8
2,636,144 - +0.9
2,636,144 - -1.3
2,636,146 + +0.1
2,636,146 + -0.3
2,636,147 - -0.5
2,636,201 - +0.6
2,636,267 + -0.5
2,636,267 + -0.2
2,636,267 + +0.8
2,636,267 + -0.4
2,636,267 + +0.6
2,636,268 - +0.2
2,636,268 - +0.2
2,636,268 - -0.5
2,636,287 + +0.6
2,636,287 + +0.9
2,636,287 + +0.2
2,636,287 + -0.8
2,636,287 + -0.6
2,636,288 - +0.3
2,636,288 - +0.4
2,636,288 - -0.8
2,636,288 - -0.3
2,636,288 - -0.9
2,636,288 - +1.2
2,636,288 - +1.2
2,636,288 - +1.3
2,636,288 - +1.2
2,636,317 + -0.4
2,636,317 + -0.5
2,636,318 - -0.2
2,636,318 - -0.5
2,636,318 - -0.0
2,636,344 + -1.2
2,636,344 + -0.4
2,636,344 + +1.1
2,636,344 + +0.3
2,636,344 + +0.2
2,636,344 + -0.0
2,636,345 - -0.5
2,636,345 - +0.1
2,636,345 - -1.1
2,636,345 - +0.3
2,636,440 + -0.8
2,636,440 + -1.0
2,636,440 + -0.1
2,636,440 + -1.9
2,636,440 + -0.8
2,636,440 + -0.1
2,636,440 + -0.9
2,636,440 + +0.0
2,636,440 + +0.3
2,636,440 + +0.6
2,636,440 + -0.7
2,636,441 - -0.8
2,636,441 - -0.3
2,636,441 - -0.5
2,636,441 - -0.4
2,636,441 - +0.7
2,636,441 - +1.0
2,636,441 - -2.2
2,636,441 - -0.3
2,636,441 - +0.8
2,636,441 - +0.7
2,636,675 + -0.6
2,636,675 + +0.6
2,636,675 + +0.6
2,636,676 - -0.6
2,636,676 - -0.5
2,636,676 - -0.0
2,636,676 - -1.0
2,636,725 + +0.1
2,636,725 + -0.7
2,636,725 + -0.2
2,636,726 - -0.7
2,636,726 - +1.4
2,636,802 + -0.7
2,636,802 + -0.6
2,636,803 - -0.1
2,636,803 - -0.7
2,636,893 + A4249_RS13105 0.22 -0.2
2,636,893 + A4249_RS13105 0.22 -1.2
2,636,893 + A4249_RS13105 0.22 +0.0
2,636,932 + A4249_RS13105 0.30 -0.3
2,636,932 + A4249_RS13105 0.30 +1.2
2,636,932 + A4249_RS13105 0.30 +0.7
2,636,932 + A4249_RS13105 0.30 +0.1
2,636,932 + A4249_RS13105 0.30 +0.1
2,636,932 + A4249_RS13105 0.30 -0.3
2,636,932 + A4249_RS13105 0.30 -0.2
2,636,932 + A4249_RS13105 0.30 -0.8
2,636,933 - A4249_RS13105 0.30 -1.9
2,636,933 - A4249_RS13105 0.30 -0.7
2,636,933 - A4249_RS13105 0.30 -0.4
2,636,933 - A4249_RS13105 0.30 -0.6
2,636,933 - A4249_RS13105 0.30 -0.8
2,636,933 - A4249_RS13105 0.30 -0.3
2,636,933 - A4249_RS13105 0.30 -0.1
2,636,933 - A4249_RS13105 0.30 +0.7
2,636,933 - A4249_RS13105 0.30 +0.1
2,636,933 - A4249_RS13105 0.30 -0.2
2,636,933 - A4249_RS13105 0.30 -1.3
2,636,933 - A4249_RS13105 0.30 -0.8

Or see this region's nucleotide sequence