Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11735 and A4249_RS17060 are separated by 11 nucleotides A4249_RS17060 and A4249_RS11740 are separated by 7 nucleotides A4249_RS11740 and A4249_RS11745 overlap by 4 nucleotides A4249_RS11745 and A4249_RS11750 overlap by 4 nucleotides
A4249_RS11735: A4249_RS11735 - heavy metal translocating P-type ATPase, at 2,354,684 to 2,357,245
_RS11735
A4249_RS17060: A4249_RS17060 - hypothetical protein, at 2,357,257 to 2,357,388
_RS17060
A4249_RS11740: A4249_RS11740 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,357,396 to 2,358,007
_RS11740
A4249_RS11745: A4249_RS11745 - cation transporter, at 2,358,004 to 2,358,609
_RS11745
A4249_RS11750: A4249_RS11750 - CusA/CzcA family heavy metal efflux RND transporter, at 2,358,606 to 2,361,830
_RS11750
Position (kb)
2357
2358
2359 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2356.497 kb on + strand, within A4249_RS11735 at 2356.497 kb on + strand, within A4249_RS11735 at 2356.497 kb on + strand, within A4249_RS11735 at 2356.498 kb on - strand, within A4249_RS11735 at 2356.498 kb on - strand, within A4249_RS11735 at 2356.498 kb on - strand, within A4249_RS11735 at 2356.498 kb on - strand, within A4249_RS11735 at 2356.498 kb on - strand, within A4249_RS11735 at 2356.723 kb on + strand, within A4249_RS11735 at 2356.723 kb on + strand, within A4249_RS11735 at 2356.724 kb on - strand, within A4249_RS11735 at 2356.724 kb on - strand, within A4249_RS11735 at 2356.724 kb on - strand, within A4249_RS11735 at 2356.724 kb on - strand, within A4249_RS11735 at 2356.724 kb on - strand, within A4249_RS11735 at 2356.724 kb on - strand, within A4249_RS11735 at 2357.082 kb on + strand at 2357.402 kb on + strand at 2357.589 kb on + strand, within A4249_RS11740 at 2357.589 kb on + strand, within A4249_RS11740 at 2357.589 kb on + strand, within A4249_RS11740 at 2357.589 kb on + strand, within A4249_RS11740 at 2357.589 kb on + strand, within A4249_RS11740 at 2357.590 kb on - strand, within A4249_RS11740 at 2357.590 kb on - strand, within A4249_RS11740 at 2357.598 kb on + strand, within A4249_RS11740 at 2357.598 kb on + strand, within A4249_RS11740 at 2357.599 kb on - strand, within A4249_RS11740 at 2357.599 kb on - strand, within A4249_RS11740 at 2357.599 kb on - strand, within A4249_RS11740 at 2357.748 kb on + strand, within A4249_RS11740 at 2357.748 kb on + strand, within A4249_RS11740 at 2357.748 kb on + strand, within A4249_RS11740 at 2357.749 kb on - strand, within A4249_RS11740 at 2357.772 kb on + strand, within A4249_RS11740 at 2357.772 kb on + strand, within A4249_RS11740 at 2357.773 kb on - strand, within A4249_RS11740 at 2357.817 kb on + strand, within A4249_RS11740 at 2357.817 kb on + strand, within A4249_RS11740 at 2357.817 kb on + strand, within A4249_RS11740 at 2357.817 kb on - strand, within A4249_RS11740 at 2357.818 kb on - strand, within A4249_RS11740 at 2357.818 kb on - strand, within A4249_RS11740 at 2358.052 kb on + strand at 2358.052 kb on + strand at 2358.053 kb on - strand at 2358.053 kb on - strand at 2358.079 kb on + strand, within A4249_RS11745 at 2358.446 kb on + strand, within A4249_RS11745 at 2358.446 kb on + strand, within A4249_RS11745 at 2358.446 kb on + strand, within A4249_RS11745 at 2358.446 kb on + strand, within A4249_RS11745 at 2358.446 kb on + strand, within A4249_RS11745 at 2358.447 kb on - strand, within A4249_RS11745 at 2358.447 kb on - strand, within A4249_RS11745 at 2358.447 kb on - strand, within A4249_RS11745 at 2358.771 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,356,497 + A4249_RS11735 0.71 +0.6 2,356,497 + A4249_RS11735 0.71 +0.3 2,356,497 + A4249_RS11735 0.71 +0.8 2,356,498 - A4249_RS11735 0.71 -1.0 2,356,498 - A4249_RS11735 0.71 +1.1 2,356,498 - A4249_RS11735 0.71 -0.0 2,356,498 - A4249_RS11735 0.71 +0.1 2,356,498 - A4249_RS11735 0.71 -0.9 2,356,723 + A4249_RS11735 0.80 -2.4 2,356,723 + A4249_RS11735 0.80 +0.7 2,356,724 - A4249_RS11735 0.80 +0.4 2,356,724 - A4249_RS11735 0.80 +0.1 2,356,724 - A4249_RS11735 0.80 -0.0 2,356,724 - A4249_RS11735 0.80 +0.9 2,356,724 - A4249_RS11735 0.80 +0.3 2,356,724 - A4249_RS11735 0.80 +0.5 2,357,082 + +0.5 2,357,402 + +0.3 2,357,589 + A4249_RS11740 0.32 -0.4 2,357,589 + A4249_RS11740 0.32 +0.4 2,357,589 + A4249_RS11740 0.32 +1.0 2,357,589 + A4249_RS11740 0.32 -1.1 2,357,589 + A4249_RS11740 0.32 -0.3 2,357,590 - A4249_RS11740 0.32 +0.9 2,357,590 - A4249_RS11740 0.32 -0.3 2,357,598 + A4249_RS11740 0.33 +0.3 2,357,598 + A4249_RS11740 0.33 +0.4 2,357,599 - A4249_RS11740 0.33 -1.7 2,357,599 - A4249_RS11740 0.33 +0.7 2,357,599 - A4249_RS11740 0.33 +1.0 2,357,748 + A4249_RS11740 0.58 -0.6 2,357,748 + A4249_RS11740 0.58 -0.1 2,357,748 + A4249_RS11740 0.58 -0.6 2,357,749 - A4249_RS11740 0.58 -1.6 2,357,772 + A4249_RS11740 0.61 -0.8 2,357,772 + A4249_RS11740 0.61 -0.2 2,357,773 - A4249_RS11740 0.62 -0.2 2,357,817 + A4249_RS11740 0.69 +0.1 2,357,817 + A4249_RS11740 0.69 -0.5 2,357,817 + A4249_RS11740 0.69 -0.3 2,357,817 - A4249_RS11740 0.69 -0.0 2,357,818 - A4249_RS11740 0.69 +0.6 2,357,818 - A4249_RS11740 0.69 -0.1 2,358,052 + +1.0 2,358,052 + -0.5 2,358,053 - -0.8 2,358,053 - +0.4 2,358,079 + A4249_RS11745 0.12 +0.9 2,358,446 + A4249_RS11745 0.73 -0.4 2,358,446 + A4249_RS11745 0.73 +0.5 2,358,446 + A4249_RS11745 0.73 -0.5 2,358,446 + A4249_RS11745 0.73 -0.9 2,358,446 + A4249_RS11745 0.73 -0.2 2,358,447 - A4249_RS11745 0.73 +0.6 2,358,447 - A4249_RS11745 0.73 +2.4 2,358,447 - A4249_RS11745 0.73 -0.4 2,358,771 - -0.1
Or see this region's nucleotide sequence