Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09695 and A4249_RS09700 are separated by 79 nucleotides A4249_RS09700 and A4249_RS09705 are separated by 48 nucleotides A4249_RS09705 and A4249_RS09710 are separated by 41 nucleotides
A4249_RS09695: A4249_RS09695 - polyprenyl synthetase family protein, at 1,934,262 to 1,935,137
_RS09695
A4249_RS09700: A4249_RS09700 - exodeoxyribonuclease VII small subunit, at 1,935,217 to 1,935,468
_RS09700
A4249_RS09705: A4249_RS09705 - histidine phosphatase family protein, at 1,935,517 to 1,936,179
_RS09705
A4249_RS09710: A4249_RS09710 - histone deacetylase family protein, at 1,936,221 to 1,937,141
_RS09710
Position (kb)
1935
1936 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1934.277 kb on + strand at 1934.277 kb on + strand at 1934.278 kb on - strand at 1934.278 kb on - strand at 1934.500 kb on + strand, within A4249_RS09695 at 1934.500 kb on + strand, within A4249_RS09695 at 1934.501 kb on - strand, within A4249_RS09695 at 1934.501 kb on - strand, within A4249_RS09695 at 1934.501 kb on - strand, within A4249_RS09695 at 1934.590 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.830 kb on + strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.831 kb on - strand, within A4249_RS09695 at 1934.908 kb on + strand, within A4249_RS09695 at 1934.909 kb on - strand, within A4249_RS09695 at 1934.946 kb on + strand, within A4249_RS09695 at 1934.946 kb on + strand, within A4249_RS09695 at 1935.031 kb on + strand, within A4249_RS09695 at 1935.031 kb on + strand, within A4249_RS09695 at 1935.031 kb on + strand, within A4249_RS09695 at 1935.032 kb on - strand, within A4249_RS09695 at 1935.199 kb on + strand at 1935.200 kb on - strand at 1935.344 kb on + strand, within A4249_RS09700 at 1935.345 kb on - strand, within A4249_RS09700 at 1935.481 kb on - strand at 1936.266 kb on + strand at 1936.266 kb on + strand at 1936.267 kb on - strand at 1936.267 kb on - strand at 1936.267 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,934,277 + -0.5 1,934,277 + +0.0 1,934,278 - +0.0 1,934,278 - -0.4 1,934,500 + A4249_RS09695 0.27 -0.1 1,934,500 + A4249_RS09695 0.27 -0.6 1,934,501 - A4249_RS09695 0.27 -0.6 1,934,501 - A4249_RS09695 0.27 +0.1 1,934,501 - A4249_RS09695 0.27 +0.7 1,934,590 + A4249_RS09695 0.37 -1.8 1,934,830 + A4249_RS09695 0.65 -0.2 1,934,830 + A4249_RS09695 0.65 -0.0 1,934,830 + A4249_RS09695 0.65 -0.4 1,934,830 + A4249_RS09695 0.65 -0.4 1,934,830 + A4249_RS09695 0.65 +0.2 1,934,830 + A4249_RS09695 0.65 -0.6 1,934,830 + A4249_RS09695 0.65 +0.8 1,934,830 + A4249_RS09695 0.65 -0.1 1,934,830 + A4249_RS09695 0.65 +0.3 1,934,830 + A4249_RS09695 0.65 +0.4 1,934,831 - A4249_RS09695 0.65 -0.2 1,934,831 - A4249_RS09695 0.65 -0.6 1,934,831 - A4249_RS09695 0.65 +0.2 1,934,831 - A4249_RS09695 0.65 -0.3 1,934,831 - A4249_RS09695 0.65 -0.7 1,934,831 - A4249_RS09695 0.65 +0.5 1,934,831 - A4249_RS09695 0.65 -0.7 1,934,908 + A4249_RS09695 0.74 +0.2 1,934,909 - A4249_RS09695 0.74 -0.1 1,934,946 + A4249_RS09695 0.78 +0.3 1,934,946 + A4249_RS09695 0.78 +0.1 1,935,031 + A4249_RS09695 0.88 -0.4 1,935,031 + A4249_RS09695 0.88 -0.3 1,935,031 + A4249_RS09695 0.88 -0.2 1,935,032 - A4249_RS09695 0.88 +0.8 1,935,199 + -0.7 1,935,200 - +0.3 1,935,344 + A4249_RS09700 0.50 +1.9 1,935,345 - A4249_RS09700 0.51 +0.1 1,935,481 - -0.0 1,936,266 + -2.2 1,936,266 + -0.1 1,936,267 - +0.3 1,936,267 - -0.6 1,936,267 - +0.1
Or see this region's nucleotide sequence