Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09060

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09050 and A4249_RS09055 are separated by 91 nucleotidesA4249_RS09055 and A4249_RS09060 are separated by 2 nucleotidesA4249_RS09060 and A4249_RS09065 are separated by 150 nucleotidesA4249_RS09065 and A4249_RS09070 are separated by 3 nucleotides A4249_RS09050: A4249_RS09050 - WYL domain-containing protein, at 1,814,395 to 1,815,384 _RS09050 A4249_RS09055: A4249_RS09055 - hypothetical protein, at 1,815,476 to 1,815,700 _RS09055 A4249_RS09060: A4249_RS09060 - acyltransferase, at 1,815,703 to 1,816,710 _RS09060 A4249_RS09065: A4249_RS09065 - DUF1801 domain-containing protein, at 1,816,861 to 1,817,265 _RS09065 A4249_RS09070: A4249_RS09070 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 1,817,269 to 1,818,693 _RS09070 Position (kb) 1815 1816 1817Strain fitness (log2 ratio) -2 -1 0 1at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.810 kb on + strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.811 kb on - strand, within A4249_RS09050at 1814.882 kb on + strand, within A4249_RS09050at 1814.882 kb on + strand, within A4249_RS09050at 1814.882 kb on + strand, within A4249_RS09050at 1814.883 kb on - strand, within A4249_RS09050at 1814.883 kb on - strand, within A4249_RS09050at 1814.883 kb on - strand, within A4249_RS09050at 1814.883 kb on - strand, within A4249_RS09050at 1814.883 kb on - strand, within A4249_RS09050at 1815.401 kb on + strandat 1815.402 kb on - strandat 1815.518 kb on + strand, within A4249_RS09055at 1815.518 kb on + strand, within A4249_RS09055at 1815.518 kb on + strand, within A4249_RS09055at 1815.519 kb on - strand, within A4249_RS09055at 1815.519 kb on - strand, within A4249_RS09055at 1815.626 kb on + strand, within A4249_RS09055at 1815.627 kb on - strand, within A4249_RS09055at 1815.901 kb on + strand, within A4249_RS09060at 1815.902 kb on - strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1816.184 kb on + strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.218 kb on + strand, within A4249_RS09060at 1816.218 kb on + strand, within A4249_RS09060at 1816.219 kb on - strand, within A4249_RS09060at 1816.219 kb on - strand, within A4249_RS09060at 1816.219 kb on - strand, within A4249_RS09060at 1816.238 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.386 kb on - strand, within A4249_RS09060at 1816.386 kb on - strand, within A4249_RS09060at 1816.433 kb on - strand, within A4249_RS09060at 1816.522 kb on + strand, within A4249_RS09060at 1816.522 kb on + strand, within A4249_RS09060at 1816.607 kb on + strand, within A4249_RS09060at 1816.608 kb on - strand, within A4249_RS09060at 1816.608 kb on - strand, within A4249_RS09060at 1816.608 kb on - strand, within A4249_RS09060at 1816.647 kb on - strandat 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.949 kb on + strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.992 kb on + strand, within A4249_RS09065at 1816.992 kb on + strand, within A4249_RS09065at 1816.993 kb on - strand, within A4249_RS09065at 1816.993 kb on - strand, within A4249_RS09065at 1816.993 kb on - strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.028 kb on - strand, within A4249_RS09065at 1817.028 kb on - strand, within A4249_RS09065at 1817.028 kb on - strand, within A4249_RS09065at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.439 kb on - strand, within A4249_RS09070at 1817.439 kb on - strand, within A4249_RS09070at 1817.561 kb on + strand, within A4249_RS09070at 1817.562 kb on - strand, within A4249_RS09070at 1817.562 kb on - strand, within A4249_RS09070at 1817.562 kb on - strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.596 kb on - strand, within A4249_RS09070at 1817.596 kb on - strand, within A4249_RS09070at 1817.596 kb on - strand, within A4249_RS09070at 1817.633 kb on + strand, within A4249_RS09070at 1817.633 kb on + strand, within A4249_RS09070at 1817.634 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,814,810 + A4249_RS09050 0.42 -1.9
1,814,810 + A4249_RS09050 0.42 +0.1
1,814,810 + A4249_RS09050 0.42 -1.5
1,814,810 + A4249_RS09050 0.42 -0.1
1,814,810 + A4249_RS09050 0.42 +0.1
1,814,810 + A4249_RS09050 0.42 +0.0
1,814,810 + A4249_RS09050 0.42 -0.6
1,814,810 + A4249_RS09050 0.42 -0.4
1,814,810 + A4249_RS09050 0.42 -0.8
1,814,810 + A4249_RS09050 0.42 -0.1
1,814,810 + A4249_RS09050 0.42 -0.5
1,814,810 + A4249_RS09050 0.42 -0.3
1,814,810 + A4249_RS09050 0.42 +0.2
1,814,810 + A4249_RS09050 0.42 +0.1
1,814,811 - A4249_RS09050 0.42 -0.9
1,814,811 - A4249_RS09050 0.42 -0.3
1,814,811 - A4249_RS09050 0.42 -0.2
1,814,811 - A4249_RS09050 0.42 -0.5
1,814,811 - A4249_RS09050 0.42 +0.6
1,814,811 - A4249_RS09050 0.42 +0.8
1,814,811 - A4249_RS09050 0.42 +0.1
1,814,882 + A4249_RS09050 0.49 -0.3
1,814,882 + A4249_RS09050 0.49 -1.5
1,814,882 + A4249_RS09050 0.49 -1.0
1,814,883 - A4249_RS09050 0.49 +1.0
1,814,883 - A4249_RS09050 0.49 -0.2
1,814,883 - A4249_RS09050 0.49 -0.6
1,814,883 - A4249_RS09050 0.49 +0.0
1,814,883 - A4249_RS09050 0.49 +0.5
1,815,401 + -0.2
1,815,402 - -0.7
1,815,518 + A4249_RS09055 0.19 -0.2
1,815,518 + A4249_RS09055 0.19 -1.2
1,815,518 + A4249_RS09055 0.19 -0.6
1,815,519 - A4249_RS09055 0.19 +0.1
1,815,519 - A4249_RS09055 0.19 -0.4
1,815,626 + A4249_RS09055 0.67 -0.2
1,815,627 - A4249_RS09055 0.67 -0.2
1,815,901 + A4249_RS09060 0.20 -1.4
1,815,902 - A4249_RS09060 0.20 -0.6
1,815,923 + A4249_RS09060 0.22 -0.1
1,815,923 + A4249_RS09060 0.22 -0.2
1,815,923 + A4249_RS09060 0.22 -0.4
1,815,923 + A4249_RS09060 0.22 +0.1
1,815,923 + A4249_RS09060 0.22 +0.6
1,815,923 + A4249_RS09060 0.22 +0.5
1,815,923 + A4249_RS09060 0.22 +0.9
1,815,923 + A4249_RS09060 0.22 +0.3
1,815,923 + A4249_RS09060 0.22 -0.6
1,815,924 - A4249_RS09060 0.22 -0.4
1,815,924 - A4249_RS09060 0.22 -0.6
1,815,924 - A4249_RS09060 0.22 -0.8
1,815,924 - A4249_RS09060 0.22 +0.6
1,815,924 - A4249_RS09060 0.22 +0.6
1,815,924 - A4249_RS09060 0.22 +0.3
1,815,924 - A4249_RS09060 0.22 +0.4
1,815,924 - A4249_RS09060 0.22 +1.0
1,815,924 - A4249_RS09060 0.22 -0.5
1,815,924 - A4249_RS09060 0.22 +0.1
1,816,184 + A4249_RS09060 0.48 +0.7
1,816,185 - A4249_RS09060 0.48 +0.3
1,816,185 - A4249_RS09060 0.48 -1.2
1,816,185 - A4249_RS09060 0.48 -0.7
1,816,185 - A4249_RS09060 0.48 -0.6
1,816,211 + A4249_RS09060 0.50 -0.1
1,816,211 + A4249_RS09060 0.50 -0.5
1,816,211 + A4249_RS09060 0.50 -0.9
1,816,211 + A4249_RS09060 0.50 +0.2
1,816,211 + A4249_RS09060 0.50 -0.7
1,816,212 - A4249_RS09060 0.50 -0.2
1,816,212 - A4249_RS09060 0.50 -0.7
1,816,212 - A4249_RS09060 0.50 +0.1
1,816,212 - A4249_RS09060 0.50 +1.6
1,816,218 + A4249_RS09060 0.51 -0.4
1,816,218 + A4249_RS09060 0.51 -1.0
1,816,219 - A4249_RS09060 0.51 -0.0
1,816,219 - A4249_RS09060 0.51 -0.7
1,816,219 - A4249_RS09060 0.51 +0.3
1,816,238 + A4249_RS09060 0.53 -1.1
1,816,385 + A4249_RS09060 0.68 -1.3
1,816,385 + A4249_RS09060 0.68 +0.1
1,816,385 + A4249_RS09060 0.68 +1.1
1,816,385 + A4249_RS09060 0.68 +0.3
1,816,385 + A4249_RS09060 0.68 +0.4
1,816,386 - A4249_RS09060 0.68 -0.6
1,816,386 - A4249_RS09060 0.68 -0.4
1,816,433 - A4249_RS09060 0.72 -1.1
1,816,522 + A4249_RS09060 0.81 +1.1
1,816,522 + A4249_RS09060 0.81 -0.1
1,816,607 + A4249_RS09060 0.90 -1.0
1,816,608 - A4249_RS09060 0.90 -1.3
1,816,608 - A4249_RS09060 0.90 +1.0
1,816,608 - A4249_RS09060 0.90 -0.2
1,816,647 - -1.3
1,816,947 + A4249_RS09065 0.21 -0.6
1,816,947 + A4249_RS09065 0.21 -0.5
1,816,947 + A4249_RS09065 0.21 -0.6
1,816,947 + A4249_RS09065 0.21 +0.1
1,816,947 + A4249_RS09065 0.21 -0.3
1,816,947 + A4249_RS09065 0.21 -0.1
1,816,948 - A4249_RS09065 0.21 -0.3
1,816,948 - A4249_RS09065 0.21 -0.4
1,816,948 - A4249_RS09065 0.21 +0.5
1,816,948 - A4249_RS09065 0.21 +0.0
1,816,948 - A4249_RS09065 0.21 -0.6
1,816,949 + A4249_RS09065 0.22 +0.1
1,816,950 - A4249_RS09065 0.22 +0.5
1,816,950 - A4249_RS09065 0.22 -0.3
1,816,950 - A4249_RS09065 0.22 +0.2
1,816,950 - A4249_RS09065 0.22 +0.2
1,816,992 + A4249_RS09065 0.32 +0.9
1,816,992 + A4249_RS09065 0.32 +0.8
1,816,993 - A4249_RS09065 0.33 +0.2
1,816,993 - A4249_RS09065 0.33 -0.3
1,816,993 - A4249_RS09065 0.33 -0.7
1,817,027 + A4249_RS09065 0.41 -1.0
1,817,027 + A4249_RS09065 0.41 +0.1
1,817,027 + A4249_RS09065 0.41 +0.0
1,817,027 + A4249_RS09065 0.41 -0.5
1,817,028 - A4249_RS09065 0.41 +0.3
1,817,028 - A4249_RS09065 0.41 +0.4
1,817,028 - A4249_RS09065 0.41 -0.5
1,817,438 + A4249_RS09070 0.12 -0.1
1,817,438 + A4249_RS09070 0.12 +0.3
1,817,438 + A4249_RS09070 0.12 -0.6
1,817,438 + A4249_RS09070 0.12 +1.4
1,817,438 + A4249_RS09070 0.12 +1.2
1,817,438 + A4249_RS09070 0.12 -0.7
1,817,439 - A4249_RS09070 0.12 -0.6
1,817,439 - A4249_RS09070 0.12 -0.0
1,817,561 + A4249_RS09070 0.20 -0.7
1,817,562 - A4249_RS09070 0.21 -0.5
1,817,562 - A4249_RS09070 0.21 +0.3
1,817,562 - A4249_RS09070 0.21 -0.5
1,817,595 + A4249_RS09070 0.23 -0.1
1,817,595 + A4249_RS09070 0.23 -0.0
1,817,595 + A4249_RS09070 0.23 -0.3
1,817,595 + A4249_RS09070 0.23 -0.2
1,817,595 + A4249_RS09070 0.23 -0.8
1,817,596 - A4249_RS09070 0.23 -0.3
1,817,596 - A4249_RS09070 0.23 -0.0
1,817,596 - A4249_RS09070 0.23 -1.1
1,817,633 + A4249_RS09070 0.26 +0.3
1,817,633 + A4249_RS09070 0.26 -0.1
1,817,634 - A4249_RS09070 0.26 -0.1
1,817,667 - A4249_RS09070 0.28 -0.8
1,817,667 - A4249_RS09070 0.28 -0.7
1,817,667 - A4249_RS09070 0.28 -0.5
1,817,667 - A4249_RS09070 0.28 +0.8

Or see this region's nucleotide sequence