Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07315 and A4249_RS07320 are separated by 102 nucleotides A4249_RS07320 and A4249_RS07325 are separated by 110 nucleotides A4249_RS07325 and A4249_RS07330 are separated by 66 nucleotides A4249_RS07330 and A4249_RS07335 are separated by 48 nucleotides
A4249_RS07315: A4249_RS07315 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,461,234 to 1,462,523
_RS07315
A4249_RS07320: A4249_RS07320 - hypothetical protein, at 1,462,626 to 1,462,823
_RS07320
A4249_RS07325: A4249_RS07325 - tRNA-Thr, at 1,462,934 to 1,463,008
_RS07325
A4249_RS07330: A4249_RS07330 - hypothetical protein, at 1,463,075 to 1,463,662
_RS07330
A4249_RS07335: A4249_RS07335 - peptide-methionine (R)-S-oxide reductase MsrB, at 1,463,711 to 1,464,205
_RS07335
Position (kb)
1462
1463 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1462.572 kb on + strand at 1462.573 kb on - strand at 1462.573 kb on - strand at 1462.573 kb on - strand at 1462.796 kb on + strand, within A4249_RS07320 at 1462.796 kb on + strand, within A4249_RS07320 at 1463.083 kb on - strand at 1463.088 kb on + strand at 1463.088 kb on + strand at 1463.088 kb on + strand at 1463.088 kb on + strand at 1463.088 kb on + strand at 1463.089 kb on - strand at 1463.089 kb on - strand at 1463.089 kb on - strand at 1463.152 kb on + strand, within A4249_RS07330 at 1463.152 kb on + strand, within A4249_RS07330 at 1463.152 kb on + strand, within A4249_RS07330 at 1463.153 kb on - strand, within A4249_RS07330 at 1463.153 kb on - strand, within A4249_RS07330 at 1463.153 kb on - strand, within A4249_RS07330 at 1463.153 kb on - strand, within A4249_RS07330 at 1463.211 kb on + strand, within A4249_RS07330 at 1463.211 kb on + strand, within A4249_RS07330 at 1463.212 kb on - strand, within A4249_RS07330 at 1463.212 kb on - strand, within A4249_RS07330 at 1463.212 kb on - strand, within A4249_RS07330 at 1463.220 kb on + strand, within A4249_RS07330 at 1463.220 kb on + strand, within A4249_RS07330 at 1463.220 kb on + strand, within A4249_RS07330 at 1463.220 kb on + strand, within A4249_RS07330 at 1463.221 kb on - strand, within A4249_RS07330 at 1463.221 kb on - strand, within A4249_RS07330 at 1463.244 kb on + strand, within A4249_RS07330 at 1463.245 kb on - strand, within A4249_RS07330 at 1463.260 kb on - strand, within A4249_RS07330 at 1463.289 kb on + strand, within A4249_RS07330 at 1463.289 kb on + strand, within A4249_RS07330 at 1463.290 kb on - strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.294 kb on + strand, within A4249_RS07330 at 1463.295 kb on - strand, within A4249_RS07330 at 1463.295 kb on - strand, within A4249_RS07330 at 1463.295 kb on - strand, within A4249_RS07330 at 1463.343 kb on + strand, within A4249_RS07330 at 1463.343 kb on + strand, within A4249_RS07330 at 1463.343 kb on + strand, within A4249_RS07330 at 1463.343 kb on + strand, within A4249_RS07330 at 1463.343 kb on + strand, within A4249_RS07330 at 1463.344 kb on - strand, within A4249_RS07330 at 1463.344 kb on - strand, within A4249_RS07330 at 1463.344 kb on - strand, within A4249_RS07330 at 1463.662 kb on + strand at 1463.662 kb on + strand at 1463.662 kb on + strand at 1463.663 kb on - strand at 1463.663 kb on - strand at 1463.663 kb on - strand at 1463.663 kb on - strand at 1463.688 kb on + strand at 1463.688 kb on + strand at 1463.688 kb on + strand at 1463.688 kb on + strand at 1463.688 kb on + strand at 1463.689 kb on - strand at 1463.689 kb on - strand at 1463.689 kb on - strand at 1463.689 kb on - strand at 1463.689 kb on - strand at 1463.797 kb on - strand, within A4249_RS07335 at 1463.797 kb on - strand, within A4249_RS07335
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,462,572 + -0.6 1,462,573 - -0.2 1,462,573 - -0.1 1,462,573 - -0.0 1,462,796 + A4249_RS07320 0.86 +0.1 1,462,796 + A4249_RS07320 0.86 -0.8 1,463,083 - -0.7 1,463,088 + -1.6 1,463,088 + -1.0 1,463,088 + -1.0 1,463,088 + +0.5 1,463,088 + -0.8 1,463,089 - -0.5 1,463,089 - -0.1 1,463,089 - -2.2 1,463,152 + A4249_RS07330 0.13 +1.3 1,463,152 + A4249_RS07330 0.13 +0.6 1,463,152 + A4249_RS07330 0.13 +1.1 1,463,153 - A4249_RS07330 0.13 +1.0 1,463,153 - A4249_RS07330 0.13 -2.0 1,463,153 - A4249_RS07330 0.13 +0.1 1,463,153 - A4249_RS07330 0.13 -0.6 1,463,211 + A4249_RS07330 0.23 -0.3 1,463,211 + A4249_RS07330 0.23 +0.4 1,463,212 - A4249_RS07330 0.23 +1.2 1,463,212 - A4249_RS07330 0.23 +0.5 1,463,212 - A4249_RS07330 0.23 -0.1 1,463,220 + A4249_RS07330 0.25 -2.2 1,463,220 + A4249_RS07330 0.25 +0.9 1,463,220 + A4249_RS07330 0.25 +0.7 1,463,220 + A4249_RS07330 0.25 +0.1 1,463,221 - A4249_RS07330 0.25 +1.3 1,463,221 - A4249_RS07330 0.25 +0.2 1,463,244 + A4249_RS07330 0.29 +0.6 1,463,245 - A4249_RS07330 0.29 +0.9 1,463,260 - A4249_RS07330 0.31 -0.1 1,463,289 + A4249_RS07330 0.36 -1.3 1,463,289 + A4249_RS07330 0.36 +0.0 1,463,290 - A4249_RS07330 0.37 +0.6 1,463,294 + A4249_RS07330 0.37 -0.1 1,463,294 + A4249_RS07330 0.37 +0.1 1,463,294 + A4249_RS07330 0.37 +1.4 1,463,294 + A4249_RS07330 0.37 +0.7 1,463,294 + A4249_RS07330 0.37 +0.2 1,463,294 + A4249_RS07330 0.37 -0.4 1,463,294 + A4249_RS07330 0.37 +0.5 1,463,295 - A4249_RS07330 0.37 -1.2 1,463,295 - A4249_RS07330 0.37 +1.0 1,463,295 - A4249_RS07330 0.37 -0.5 1,463,343 + A4249_RS07330 0.46 +1.0 1,463,343 + A4249_RS07330 0.46 -0.8 1,463,343 + A4249_RS07330 0.46 +0.2 1,463,343 + A4249_RS07330 0.46 -2.1 1,463,343 + A4249_RS07330 0.46 -0.7 1,463,344 - A4249_RS07330 0.46 +0.7 1,463,344 - A4249_RS07330 0.46 +0.3 1,463,344 - A4249_RS07330 0.46 +2.4 1,463,662 + -0.4 1,463,662 + +0.7 1,463,662 + -0.5 1,463,663 - -0.1 1,463,663 - -0.2 1,463,663 - -1.7 1,463,663 - -0.4 1,463,688 + +0.5 1,463,688 + -0.8 1,463,688 + +0.4 1,463,688 + -0.0 1,463,688 + -0.4 1,463,689 - +0.1 1,463,689 - +0.5 1,463,689 - +0.5 1,463,689 - -0.3 1,463,689 - -0.3 1,463,797 - A4249_RS07335 0.17 -1.0 1,463,797 - A4249_RS07335 0.17 -0.8
Or see this region's nucleotide sequence