Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06660 and A4249_RS06665 are separated by 72 nucleotides A4249_RS06665 and A4249_RS06670 overlap by 16 nucleotides A4249_RS06670 and A4249_RS06675 are separated by 157 nucleotides A4249_RS06675 and A4249_RS06680 are separated by 139 nucleotides
A4249_RS06660: A4249_RS06660 - TPM domain-containing protein, at 1,356,808 to 1,357,485
_RS06660
A4249_RS06665: A4249_RS06665 - endonuclease/exonuclease/phosphatase family protein, at 1,357,558 to 1,358,295
_RS06665
A4249_RS06670: A4249_RS06670 - phospholipase D-like domain-containing protein, at 1,358,280 to 1,359,758
_RS06670
A4249_RS06675: A4249_RS06675 - hypothetical protein, at 1,359,916 to 1,360,098
_RS06675
A4249_RS06680: A4249_RS06680 - tipN, at 1,360,238 to 1,362,820
_RS06680
Position (kb)
1358
1359
1360 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1357.300 kb on + strand, within A4249_RS06660 at 1357.300 kb on + strand, within A4249_RS06660 at 1357.301 kb on - strand, within A4249_RS06660 at 1357.301 kb on - strand, within A4249_RS06660 at 1357.572 kb on + strand at 1357.572 kb on + strand at 1357.572 kb on + strand at 1357.572 kb on + strand at 1357.572 kb on + strand at 1357.572 kb on + strand at 1357.572 kb on + strand at 1357.573 kb on - strand at 1357.576 kb on + strand at 1357.576 kb on + strand at 1357.576 kb on + strand at 1357.576 kb on + strand at 1357.576 kb on + strand at 1357.576 kb on + strand at 1357.576 kb on + strand at 1357.577 kb on - strand at 1357.577 kb on - strand at 1357.577 kb on - strand at 1357.577 kb on - strand at 1357.789 kb on + strand, within A4249_RS06665 at 1358.078 kb on + strand, within A4249_RS06665 at 1358.078 kb on + strand, within A4249_RS06665 at 1358.079 kb on - strand, within A4249_RS06665 at 1358.079 kb on - strand, within A4249_RS06665 at 1358.079 kb on - strand, within A4249_RS06665 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.509 kb on + strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.510 kb on - strand, within A4249_RS06670 at 1358.530 kb on - strand, within A4249_RS06670 at 1358.618 kb on + strand, within A4249_RS06670 at 1358.618 kb on + strand, within A4249_RS06670 at 1358.618 kb on + strand, within A4249_RS06670 at 1358.619 kb on - strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.755 kb on + strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.756 kb on - strand, within A4249_RS06670 at 1358.923 kb on + strand, within A4249_RS06670 at 1358.938 kb on + strand, within A4249_RS06670 at 1358.939 kb on - strand, within A4249_RS06670 at 1358.939 kb on - strand, within A4249_RS06670 at 1358.976 kb on + strand, within A4249_RS06670 at 1358.977 kb on - strand, within A4249_RS06670 at 1359.424 kb on + strand, within A4249_RS06670 at 1359.424 kb on + strand, within A4249_RS06670 at 1359.424 kb on + strand, within A4249_RS06670 at 1359.425 kb on - strand, within A4249_RS06670 at 1359.425 kb on - strand, within A4249_RS06670 at 1359.425 kb on - strand, within A4249_RS06670 at 1359.425 kb on - strand, within A4249_RS06670 at 1359.425 kb on - strand, within A4249_RS06670 at 1359.425 kb on - strand, within A4249_RS06670 at 1359.649 kb on + strand at 1359.649 kb on + strand at 1359.650 kb on - strand at 1359.650 kb on - strand at 1359.650 kb on - strand at 1359.650 kb on - strand at 1359.650 kb on - strand at 1359.735 kb on - strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.736 kb on + strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.737 kb on - strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.765 kb on + strand at 1359.766 kb on - strand at 1359.766 kb on - strand at 1359.766 kb on - strand at 1359.766 kb on - strand at 1359.766 kb on - strand at 1359.766 kb on - strand at 1359.878 kb on + strand at 1359.879 kb on - strand at 1359.887 kb on + strand at 1359.893 kb on + strand at 1359.893 kb on + strand at 1359.893 kb on + strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.894 kb on - strand at 1359.912 kb on + strand at 1359.912 kb on + strand at 1359.912 kb on + strand at 1359.913 kb on - strand at 1360.184 kb on + strand at 1360.184 kb on + strand at 1360.184 kb on + strand at 1360.185 kb on - strand at 1360.185 kb on - strand at 1360.185 kb on - strand at 1360.217 kb on - strand at 1360.237 kb on + strand at 1360.237 kb on + strand at 1360.237 kb on + strand at 1360.237 kb on + strand at 1360.237 kb on + strand at 1360.237 kb on + strand at 1360.237 kb on + strand at 1360.238 kb on - strand at 1360.634 kb on + strand, within A4249_RS06680 at 1360.634 kb on + strand, within A4249_RS06680 at 1360.694 kb on + strand, within A4249_RS06680 at 1360.695 kb on - strand, within A4249_RS06680 at 1360.745 kb on + strand, within A4249_RS06680
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,357,300 + A4249_RS06660 0.73 +1.4 1,357,300 + A4249_RS06660 0.73 +0.7 1,357,301 - A4249_RS06660 0.73 -0.5 1,357,301 - A4249_RS06660 0.73 -0.3 1,357,572 + +0.6 1,357,572 + +2.4 1,357,572 + -1.1 1,357,572 + +1.8 1,357,572 + +1.5 1,357,572 + -0.6 1,357,572 + -0.9 1,357,573 - -1.8 1,357,576 + +1.2 1,357,576 + +0.6 1,357,576 + -0.4 1,357,576 + +0.8 1,357,576 + -0.9 1,357,576 + +2.0 1,357,576 + +0.1 1,357,577 - +0.6 1,357,577 - -0.3 1,357,577 - +0.6 1,357,577 - +1.4 1,357,789 + A4249_RS06665 0.31 +0.1 1,358,078 + A4249_RS06665 0.70 +0.1 1,358,078 + A4249_RS06665 0.70 -0.1 1,358,079 - A4249_RS06665 0.71 -0.6 1,358,079 - A4249_RS06665 0.71 -1.5 1,358,079 - A4249_RS06665 0.71 -0.2 1,358,509 + A4249_RS06670 0.15 +0.6 1,358,509 + A4249_RS06670 0.15 -1.2 1,358,509 + A4249_RS06670 0.15 +0.4 1,358,509 + A4249_RS06670 0.15 +0.3 1,358,509 + A4249_RS06670 0.15 -1.5 1,358,509 + A4249_RS06670 0.15 +0.5 1,358,509 + A4249_RS06670 0.15 -0.2 1,358,509 + A4249_RS06670 0.15 +0.2 1,358,509 + A4249_RS06670 0.15 +0.6 1,358,509 + A4249_RS06670 0.15 -0.4 1,358,510 - A4249_RS06670 0.16 +1.0 1,358,510 - A4249_RS06670 0.16 +0.6 1,358,510 - A4249_RS06670 0.16 +0.2 1,358,510 - A4249_RS06670 0.16 -0.5 1,358,510 - A4249_RS06670 0.16 -1.2 1,358,510 - A4249_RS06670 0.16 -0.0 1,358,510 - A4249_RS06670 0.16 +1.4 1,358,510 - A4249_RS06670 0.16 +1.6 1,358,510 - A4249_RS06670 0.16 -1.4 1,358,510 - A4249_RS06670 0.16 -0.3 1,358,510 - A4249_RS06670 0.16 +0.3 1,358,510 - A4249_RS06670 0.16 +0.1 1,358,530 - A4249_RS06670 0.17 +0.2 1,358,618 + A4249_RS06670 0.23 -0.3 1,358,618 + A4249_RS06670 0.23 -0.4 1,358,618 + A4249_RS06670 0.23 +0.2 1,358,619 - A4249_RS06670 0.23 +0.3 1,358,755 + A4249_RS06670 0.32 +0.8 1,358,755 + A4249_RS06670 0.32 -0.1 1,358,755 + A4249_RS06670 0.32 +0.1 1,358,755 + A4249_RS06670 0.32 +0.6 1,358,755 + A4249_RS06670 0.32 -0.4 1,358,755 + A4249_RS06670 0.32 +0.6 1,358,755 + A4249_RS06670 0.32 -0.0 1,358,755 + A4249_RS06670 0.32 -0.2 1,358,756 - A4249_RS06670 0.32 -0.6 1,358,756 - A4249_RS06670 0.32 +1.1 1,358,756 - A4249_RS06670 0.32 +0.1 1,358,756 - A4249_RS06670 0.32 -0.1 1,358,756 - A4249_RS06670 0.32 +1.3 1,358,756 - A4249_RS06670 0.32 +0.7 1,358,756 - A4249_RS06670 0.32 +0.3 1,358,923 + A4249_RS06670 0.43 -0.0 1,358,938 + A4249_RS06670 0.44 +1.5 1,358,939 - A4249_RS06670 0.45 +2.4 1,358,939 - A4249_RS06670 0.45 +1.1 1,358,976 + A4249_RS06670 0.47 +0.9 1,358,977 - A4249_RS06670 0.47 +0.8 1,359,424 + A4249_RS06670 0.77 -0.9 1,359,424 + A4249_RS06670 0.77 +1.3 1,359,424 + A4249_RS06670 0.77 -0.3 1,359,425 - A4249_RS06670 0.77 +1.6 1,359,425 - A4249_RS06670 0.77 -0.6 1,359,425 - A4249_RS06670 0.77 +1.0 1,359,425 - A4249_RS06670 0.77 -1.2 1,359,425 - A4249_RS06670 0.77 +1.0 1,359,425 - A4249_RS06670 0.77 -0.3 1,359,649 + +0.4 1,359,649 + -1.8 1,359,650 - +1.6 1,359,650 - +0.6 1,359,650 - +0.8 1,359,650 - +2.7 1,359,650 - +0.4 1,359,735 - +0.5 1,359,736 + +1.0 1,359,736 + -0.9 1,359,736 + +0.2 1,359,736 + -0.2 1,359,736 + +1.8 1,359,736 + +1.0 1,359,736 + +0.4 1,359,736 + +0.3 1,359,737 - +0.7 1,359,737 - +1.3 1,359,737 - -0.2 1,359,737 - +1.1 1,359,737 - +2.0 1,359,737 - +0.3 1,359,737 - -0.3 1,359,737 - +0.5 1,359,737 - -1.1 1,359,737 - -0.9 1,359,765 + +0.6 1,359,765 + +0.8 1,359,765 + -0.4 1,359,765 + +0.3 1,359,765 + -0.5 1,359,765 + -0.5 1,359,765 + -0.5 1,359,765 + +0.2 1,359,765 + +0.2 1,359,766 - +0.4 1,359,766 - +0.1 1,359,766 - +0.2 1,359,766 - +0.2 1,359,766 - -0.2 1,359,766 - -0.8 1,359,878 + +1.5 1,359,879 - -1.1 1,359,887 + -1.2 1,359,893 + -0.5 1,359,893 + -0.2 1,359,893 + -0.7 1,359,894 - -0.3 1,359,894 - -0.2 1,359,894 - +0.3 1,359,894 - -0.5 1,359,894 - -0.7 1,359,894 - -0.3 1,359,894 - +0.1 1,359,894 - -0.7 1,359,912 + -0.3 1,359,912 + +0.7 1,359,912 + +0.4 1,359,913 - -0.3 1,360,184 + -0.5 1,360,184 + +0.1 1,360,184 + +0.3 1,360,185 - -0.2 1,360,185 - -1.0 1,360,185 - -0.3 1,360,217 - -0.4 1,360,237 + -0.3 1,360,237 + -1.2 1,360,237 + +0.2 1,360,237 + +1.4 1,360,237 + +0.6 1,360,237 + +0.1 1,360,237 + +0.7 1,360,238 - -0.9 1,360,634 + A4249_RS06680 0.15 +0.4 1,360,634 + A4249_RS06680 0.15 -0.2 1,360,694 + A4249_RS06680 0.18 +2.4 1,360,695 - A4249_RS06680 0.18 -0.6 1,360,745 + A4249_RS06680 0.20 +1.6
Or see this region's nucleotide sequence