Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05975 and A4249_RS05980 are separated by 139 nucleotides A4249_RS05980 and A4249_RS05985 are separated by 5 nucleotides A4249_RS05985 and A4249_RS05990 are separated by 91 nucleotides A4249_RS05990 and A4249_RS05995 are separated by 75 nucleotides
A4249_RS05975: A4249_RS05975 - phosphate acyltransferase PlsX, at 1,218,155 to 1,219,198
_RS05975
A4249_RS05980: A4249_RS05980 - DUF177 domain-containing protein, at 1,219,338 to 1,219,856
_RS05980
A4249_RS05985: A4249_RS05985 - ubiquinol-cytochrome C chaperone family protein, at 1,219,862 to 1,220,386
_RS05985
A4249_RS05990: A4249_RS05990 - outer membrane protein assembly factor BamE, at 1,220,478 to 1,220,957
_RS05990
A4249_RS05995: A4249_RS05995 - sodium-translocating pyrophosphatase, at 1,221,033 to 1,223,180
_RS05995
Position (kb)
1219
1220
1221 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1219.328 kb on + strand at 1219.328 kb on + strand at 1219.329 kb on - strand at 1219.329 kb on - strand at 1219.329 kb on - strand at 1219.329 kb on - strand at 1219.478 kb on - strand, within A4249_RS05980 at 1219.478 kb on - strand, within A4249_RS05980 at 1219.478 kb on - strand, within A4249_RS05980 at 1219.478 kb on - strand, within A4249_RS05980 at 1219.837 kb on + strand at 1219.838 kb on - strand at 1219.942 kb on - strand, within A4249_RS05985 at 1219.984 kb on - strand, within A4249_RS05985 at 1219.984 kb on - strand, within A4249_RS05985 at 1219.984 kb on - strand, within A4249_RS05985 at 1220.046 kb on + strand, within A4249_RS05985 at 1220.046 kb on + strand, within A4249_RS05985 at 1220.047 kb on - strand, within A4249_RS05985 at 1220.047 kb on - strand, within A4249_RS05985 at 1220.047 kb on - strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.154 kb on + strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.155 kb on - strand, within A4249_RS05985 at 1220.245 kb on - strand, within A4249_RS05985 at 1220.245 kb on - strand, within A4249_RS05985 at 1220.292 kb on + strand, within A4249_RS05985 at 1220.292 kb on + strand, within A4249_RS05985 at 1220.292 kb on + strand, within A4249_RS05985 at 1220.293 kb on - strand, within A4249_RS05985 at 1220.293 kb on - strand, within A4249_RS05985 at 1220.293 kb on - strand, within A4249_RS05985 at 1220.293 kb on - strand, within A4249_RS05985 at 1220.293 kb on - strand, within A4249_RS05985 at 1220.331 kb on + strand, within A4249_RS05985 at 1220.332 kb on - strand, within A4249_RS05985 at 1220.955 kb on + strand at 1220.956 kb on - strand at 1221.015 kb on + strand at 1221.030 kb on - strand at 1221.030 kb on - strand at 1221.030 kb on - strand at 1221.034 kb on + strand at 1221.034 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.125 kb on + strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.126 kb on - strand at 1221.131 kb on + strand at 1221.131 kb on + strand at 1221.131 kb on + strand at 1221.131 kb on + strand at 1221.131 kb on + strand at 1221.132 kb on - strand at 1221.132 kb on - strand at 1221.132 kb on - strand at 1221.132 kb on - strand at 1221.132 kb on - strand at 1221.133 kb on + strand at 1221.133 kb on + strand at 1221.133 kb on + strand at 1221.134 kb on - strand at 1221.134 kb on - strand at 1221.134 kb on - strand at 1221.134 kb on - strand at 1221.134 kb on - strand at 1221.134 kb on - strand at 1221.134 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,219,328 + +0.0 1,219,328 + -1.6 1,219,329 - +1.0 1,219,329 - -1.3 1,219,329 - -1.1 1,219,329 - +1.0 1,219,478 - A4249_RS05980 0.27 -2.2 1,219,478 - A4249_RS05980 0.27 -0.8 1,219,478 - A4249_RS05980 0.27 +0.0 1,219,478 - A4249_RS05980 0.27 -0.0 1,219,837 + +1.0 1,219,838 - +0.6 1,219,942 - A4249_RS05985 0.15 +1.0 1,219,984 - A4249_RS05985 0.23 -1.0 1,219,984 - A4249_RS05985 0.23 +0.1 1,219,984 - A4249_RS05985 0.23 -0.1 1,220,046 + A4249_RS05985 0.35 -0.4 1,220,046 + A4249_RS05985 0.35 -0.6 1,220,047 - A4249_RS05985 0.35 +0.8 1,220,047 - A4249_RS05985 0.35 -0.1 1,220,047 - A4249_RS05985 0.35 -1.0 1,220,154 + A4249_RS05985 0.56 -1.0 1,220,154 + A4249_RS05985 0.56 +0.3 1,220,154 + A4249_RS05985 0.56 +0.5 1,220,154 + A4249_RS05985 0.56 -0.1 1,220,154 + A4249_RS05985 0.56 +1.3 1,220,154 + A4249_RS05985 0.56 -0.6 1,220,154 + A4249_RS05985 0.56 +0.4 1,220,155 - A4249_RS05985 0.56 +0.5 1,220,155 - A4249_RS05985 0.56 +0.3 1,220,155 - A4249_RS05985 0.56 -0.5 1,220,155 - A4249_RS05985 0.56 -0.4 1,220,155 - A4249_RS05985 0.56 -1.3 1,220,155 - A4249_RS05985 0.56 +0.4 1,220,155 - A4249_RS05985 0.56 +0.1 1,220,155 - A4249_RS05985 0.56 +1.8 1,220,155 - A4249_RS05985 0.56 -0.4 1,220,155 - A4249_RS05985 0.56 +1.1 1,220,155 - A4249_RS05985 0.56 +0.2 1,220,155 - A4249_RS05985 0.56 +1.3 1,220,245 - A4249_RS05985 0.73 -0.5 1,220,245 - A4249_RS05985 0.73 +0.6 1,220,292 + A4249_RS05985 0.82 +0.7 1,220,292 + A4249_RS05985 0.82 +0.8 1,220,292 + A4249_RS05985 0.82 -0.2 1,220,293 - A4249_RS05985 0.82 +0.5 1,220,293 - A4249_RS05985 0.82 -0.3 1,220,293 - A4249_RS05985 0.82 -0.1 1,220,293 - A4249_RS05985 0.82 -0.1 1,220,293 - A4249_RS05985 0.82 -0.6 1,220,331 + A4249_RS05985 0.89 +1.1 1,220,332 - A4249_RS05985 0.90 +0.3 1,220,955 + -0.9 1,220,956 - -0.1 1,221,015 + -1.0 1,221,030 - -1.5 1,221,030 - -0.4 1,221,030 - +0.3 1,221,034 + -1.0 1,221,034 + +0.9 1,221,125 + -0.3 1,221,125 + +0.2 1,221,125 + +0.6 1,221,125 + -0.1 1,221,125 + -0.9 1,221,125 + -0.4 1,221,125 + +0.6 1,221,125 + +0.5 1,221,125 + +0.3 1,221,125 + -0.7 1,221,125 + -1.0 1,221,125 + -0.8 1,221,125 + -0.0 1,221,125 + +0.6 1,221,125 + +0.7 1,221,126 - +0.3 1,221,126 - -0.6 1,221,126 - +0.4 1,221,126 - -0.3 1,221,126 - -0.7 1,221,126 - -0.2 1,221,126 - +0.2 1,221,126 - +0.7 1,221,126 - -1.8 1,221,126 - -0.1 1,221,131 + +0.1 1,221,131 + -0.6 1,221,131 + +0.1 1,221,131 + -0.4 1,221,131 + +0.3 1,221,132 - -0.0 1,221,132 - -0.1 1,221,132 - -1.1 1,221,132 - +0.6 1,221,132 - +0.6 1,221,133 + +0.7 1,221,133 + +0.7 1,221,133 + -0.2 1,221,134 - -0.8 1,221,134 - -1.0 1,221,134 - +0.0 1,221,134 - -0.7 1,221,134 - -0.8 1,221,134 - -0.2 1,221,134 - -0.1
Or see this region's nucleotide sequence