Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05515 and A4249_RS05520 are separated by 4 nucleotides A4249_RS05520 and A4249_RS05525 overlap by 4 nucleotides A4249_RS05525 and A4249_RS05530 are separated by 55 nucleotides A4249_RS05530 and A4249_RS05535 overlap by 1 nucleotides
A4249_RS05515: A4249_RS05515 - orotate phosphoribosyltransferase, at 1,126,774 to 1,127,358
_RS05515
A4249_RS05520: A4249_RS05520 - pyridoxine 5'-phosphate synthase, at 1,127,363 to 1,128,103
_RS05520
A4249_RS05525: A4249_RS05525 - holo-ACP synthase, at 1,128,100 to 1,128,501
_RS05525
A4249_RS05530: A4249_RS05530 - signal peptidase I, at 1,128,557 to 1,129,450
_RS05530
A4249_RS05535: A4249_RS05535 - ribonuclease III, at 1,129,450 to 1,130,160
_RS05535
Position (kb)
1128
1129 Strain fitness (log2 ratio)
-1
0
1 at 1127.356 kb on + strand at 1128.499 kb on + strand at 1128.508 kb on + strand at 1128.508 kb on + strand at 1128.508 kb on + strand at 1128.510 kb on + strand at 1128.510 kb on + strand at 1128.510 kb on + strand at 1128.510 kb on + strand at 1128.510 kb on + strand at 1128.510 kb on + strand at 1128.510 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,127,356 + -0.2 1,128,499 + +0.1 1,128,508 + -0.0 1,128,508 + -0.3 1,128,508 + -0.4 1,128,510 + +0.5 1,128,510 + +0.3 1,128,510 + +0.2 1,128,510 + -0.3 1,128,510 + -0.5 1,128,510 + -1.5 1,128,510 + -0.0
Or see this region's nucleotide sequence