Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04935

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04930 and A4249_RS04935 overlap by 4 nucleotidesA4249_RS04935 and A4249_RS04940 overlap by 1 nucleotides A4249_RS04930: A4249_RS04930 - pyruvate dehydrogenase complex E1 component subunit beta, at 1,025,332 to 1,026,699 _RS04930 A4249_RS04935: A4249_RS04935 - DUF5076 domain-containing protein, at 1,026,696 to 1,027,013 _RS04935 A4249_RS04940: A4249_RS04940 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, at 1,027,013 to 1,028,314 _RS04940 Position (kb) 1026 1027 1028Strain fitness (log2 ratio) -1 0 1at 1026.832 kb on + strand, within A4249_RS04935

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,026,832 + A4249_RS04935 0.43 -0.3

Or see this region's nucleotide sequence