Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04355 and A4249_RS04360 are separated by 138 nucleotides A4249_RS04360 and A4249_RS04365 are separated by 98 nucleotides A4249_RS04365 and A4249_RS04370 are separated by 80 nucleotides
A4249_RS04355: A4249_RS04355 - exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase, at 901,955 to 903,439
_RS04355
A4249_RS04360: A4249_RS04360 - tRNA-Ser, at 903,578 to 903,669
_RS04360
A4249_RS04365: A4249_RS04365 - fatty acid desaturase, at 903,768 to 904,493
_RS04365
A4249_RS04370: A4249_RS04370 - lycopene beta-cyclase CrtY, at 904,574 to 905,740
_RS04370
Position (kb) 903
904
905 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 903.153 kb on + strand, within A4249_RS04355 at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.313 kb on - strand at 903.313 kb on - strand at 903.483 kb on + strand at 903.484 kb on - strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.769 kb on + strand at 903.769 kb on + strand at 903.769 kb on + strand at 903.770 kb on - strand at 903.770 kb on - strand at 903.770 kb on - strand at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.951 kb on + strand, within A4249_RS04365 at 903.999 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.072 kb on + strand, within A4249_RS04365 at 904.072 kb on + strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.090 kb on + strand, within A4249_RS04365 at 904.090 kb on + strand, within A4249_RS04365 at 904.090 kb on + strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.113 kb on - strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.381 kb on + strand, within A4249_RS04365 at 904.382 kb on - strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.505 kb on + strand at 904.505 kb on + strand at 904.505 kb on + strand at 904.505 kb on + strand at 904.506 kb on - strand at 904.506 kb on - strand at 904.726 kb on + strand, within A4249_RS04370 at 904.726 kb on + strand, within A4249_RS04370 at 904.726 kb on + strand, within A4249_RS04370 at 904.727 kb on - strand, within A4249_RS04370 at 904.727 kb on - strand, within A4249_RS04370 at 904.808 kb on + strand, within A4249_RS04370 at 904.808 kb on + strand, within A4249_RS04370 at 904.808 kb on + strand, within A4249_RS04370 at 904.808 kb on + strand, within A4249_RS04370 at 904.808 kb on + strand, within A4249_RS04370 at 904.809 kb on - strand, within A4249_RS04370 at 904.809 kb on - strand, within A4249_RS04370 at 904.842 kb on + strand, within A4249_RS04370 at 904.842 kb on + strand, within A4249_RS04370 at 904.853 kb on + strand, within A4249_RS04370 at 904.853 kb on + strand, within A4249_RS04370 at 904.854 kb on - strand, within A4249_RS04370 at 905.037 kb on + strand, within A4249_RS04370 at 905.038 kb on - strand, within A4249_RS04370 at 905.038 kb on - strand, within A4249_RS04370 at 905.150 kb on + strand, within A4249_RS04370 at 905.150 kb on + strand, within A4249_RS04370 at 905.150 kb on + strand, within A4249_RS04370 at 905.150 kb on + strand, within A4249_RS04370 at 905.150 kb on + strand, within A4249_RS04370 at 905.151 kb on - strand, within A4249_RS04370 at 905.151 kb on - strand, within A4249_RS04370 at 905.198 kb on + strand, within A4249_RS04370 at 905.199 kb on - strand, within A4249_RS04370 at 905.252 kb on + strand, within A4249_RS04370 at 905.252 kb on + strand, within A4249_RS04370 at 905.253 kb on - strand, within A4249_RS04370 at 905.391 kb on + strand, within A4249_RS04370 at 905.392 kb on - strand, within A4249_RS04370
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 903,153 + A4249_RS04355 0.81 +0.1 903,312 + -0.2 903,312 + -0.4 903,312 + -0.5 903,312 + +0.0 903,312 + +0.7 903,312 + -0.6 903,312 + -0.2 903,313 - -0.4 903,313 - +1.4 903,483 + -0.9 903,484 - -1.1 903,501 + +0.1 903,501 + +0.2 903,501 + +1.0 903,501 + +0.5 903,501 + +0.0 903,501 + -1.8 903,501 + -0.7 903,501 + -0.6 903,501 + +0.5 903,502 - -1.1 903,502 - -0.2 903,502 - -0.7 903,502 - +1.5 903,502 - -1.0 903,502 - -0.4 903,502 - -0.6 903,502 - -1.7 903,682 + +0.1 903,682 + -0.7 903,682 + -0.8 903,682 + +0.6 903,682 + -0.1 903,682 + +0.4 903,682 + -0.5 903,683 - +0.2 903,683 - -2.0 903,683 - +0.3 903,683 - +0.2 903,683 - +0.3 903,683 - -0.3 903,683 - -0.0 903,683 - +1.1 903,683 - -0.3 903,684 + -0.6 903,684 + -0.2 903,684 + +0.0 903,684 + -0.7 903,684 + -1.1 903,684 + -0.2 903,684 + +0.1 903,684 + +0.0 903,684 + -1.6 903,684 + +0.3 903,684 + +0.7 903,684 + +0.3 903,685 - -0.8 903,685 - +1.0 903,685 - +0.2 903,685 - -0.9 903,685 - -0.6 903,685 - +0.3 903,685 - -0.0 903,735 + -0.3 903,735 + -0.1 903,735 + +0.3 903,735 + -0.4 903,735 + -0.7 903,769 + -0.2 903,769 + -0.1 903,769 + +0.1 903,770 - -0.3 903,770 - +0.7 903,770 - -0.9 903,917 + A4249_RS04365 0.21 -0.5 903,917 + A4249_RS04365 0.21 -0.4 903,917 + A4249_RS04365 0.21 +0.5 903,917 + A4249_RS04365 0.21 +0.6 903,917 + A4249_RS04365 0.21 -0.0 903,918 - A4249_RS04365 0.21 -0.5 903,918 - A4249_RS04365 0.21 +0.1 903,918 - A4249_RS04365 0.21 -0.2 903,918 - A4249_RS04365 0.21 +1.0 903,951 + A4249_RS04365 0.25 +2.1 903,999 + A4249_RS04365 0.32 +0.5 904,001 + A4249_RS04365 0.32 -0.3 904,001 + A4249_RS04365 0.32 -0.7 904,001 + A4249_RS04365 0.32 -0.4 904,001 + A4249_RS04365 0.32 +0.3 904,001 + A4249_RS04365 0.32 -0.2 904,002 - A4249_RS04365 0.32 -0.3 904,002 - A4249_RS04365 0.32 -0.5 904,002 - A4249_RS04365 0.32 -0.1 904,002 - A4249_RS04365 0.32 +0.0 904,072 + A4249_RS04365 0.42 -0.6 904,072 + A4249_RS04365 0.42 -0.0 904,073 - A4249_RS04365 0.42 -1.0 904,073 - A4249_RS04365 0.42 -0.1 904,073 - A4249_RS04365 0.42 +0.1 904,073 - A4249_RS04365 0.42 +0.6 904,090 + A4249_RS04365 0.44 -0.7 904,090 + A4249_RS04365 0.44 +0.9 904,090 + A4249_RS04365 0.44 -0.5 904,091 - A4249_RS04365 0.44 +0.8 904,091 - A4249_RS04365 0.44 +0.6 904,091 - A4249_RS04365 0.44 -0.5 904,091 - A4249_RS04365 0.44 -1.5 904,113 - A4249_RS04365 0.48 -0.6 904,210 + A4249_RS04365 0.61 -1.3 904,210 + A4249_RS04365 0.61 -0.9 904,210 + A4249_RS04365 0.61 -0.4 904,210 + A4249_RS04365 0.61 +1.0 904,210 + A4249_RS04365 0.61 +0.2 904,211 - A4249_RS04365 0.61 -0.8 904,211 - A4249_RS04365 0.61 -1.4 904,211 - A4249_RS04365 0.61 -0.8 904,211 - A4249_RS04365 0.61 -0.4 904,211 - A4249_RS04365 0.61 -0.9 904,211 - A4249_RS04365 0.61 -0.4 904,381 + A4249_RS04365 0.84 -0.8 904,382 - A4249_RS04365 0.85 +0.0 904,390 + A4249_RS04365 0.86 +0.5 904,390 + A4249_RS04365 0.86 -0.9 904,390 + A4249_RS04365 0.86 +0.2 904,390 + A4249_RS04365 0.86 -0.5 904,390 + A4249_RS04365 0.86 +0.6 904,390 + A4249_RS04365 0.86 +0.2 904,390 + A4249_RS04365 0.86 -0.4 904,390 + A4249_RS04365 0.86 +0.6 904,390 + A4249_RS04365 0.86 -0.8 904,391 - A4249_RS04365 0.86 -0.2 904,391 - A4249_RS04365 0.86 +0.1 904,391 - A4249_RS04365 0.86 +0.7 904,391 - A4249_RS04365 0.86 +0.2 904,391 - A4249_RS04365 0.86 -0.5 904,391 - A4249_RS04365 0.86 -1.1 904,391 - A4249_RS04365 0.86 +0.5 904,391 - A4249_RS04365 0.86 -0.1 904,391 - A4249_RS04365 0.86 +0.3 904,391 - A4249_RS04365 0.86 +0.5 904,391 - A4249_RS04365 0.86 +0.3 904,394 + A4249_RS04365 0.86 -1.1 904,394 + A4249_RS04365 0.86 -0.2 904,394 + A4249_RS04365 0.86 -0.6 904,394 + A4249_RS04365 0.86 -0.3 904,394 + A4249_RS04365 0.86 +0.5 904,394 + A4249_RS04365 0.86 +0.3 904,394 + A4249_RS04365 0.86 -0.8 904,394 + A4249_RS04365 0.86 +0.7 904,394 + A4249_RS04365 0.86 +0.1 904,395 - A4249_RS04365 0.86 -0.2 904,395 - A4249_RS04365 0.86 -0.0 904,395 - A4249_RS04365 0.86 +0.5 904,395 - A4249_RS04365 0.86 -1.2 904,395 - A4249_RS04365 0.86 -0.3 904,395 - A4249_RS04365 0.86 -3.1 904,395 - A4249_RS04365 0.86 -0.7 904,395 - A4249_RS04365 0.86 -0.2 904,505 + +0.0 904,505 + +0.3 904,505 + -0.2 904,505 + -0.5 904,506 - -0.0 904,506 - -0.2 904,726 + A4249_RS04370 0.13 -1.2 904,726 + A4249_RS04370 0.13 +0.0 904,726 + A4249_RS04370 0.13 +0.3 904,727 - A4249_RS04370 0.13 -0.2 904,727 - A4249_RS04370 0.13 +0.2 904,808 + A4249_RS04370 0.20 +0.2 904,808 + A4249_RS04370 0.20 -1.8 904,808 + A4249_RS04370 0.20 +1.0 904,808 + A4249_RS04370 0.20 +0.6 904,808 + A4249_RS04370 0.20 -0.2 904,809 - A4249_RS04370 0.20 -0.8 904,809 - A4249_RS04370 0.20 -0.0 904,842 + A4249_RS04370 0.23 -0.4 904,842 + A4249_RS04370 0.23 -0.6 904,853 + A4249_RS04370 0.24 -1.0 904,853 + A4249_RS04370 0.24 +0.2 904,854 - A4249_RS04370 0.24 +0.6 905,037 + A4249_RS04370 0.40 -0.6 905,038 - A4249_RS04370 0.40 +0.9 905,038 - A4249_RS04370 0.40 -1.1 905,150 + A4249_RS04370 0.49 -1.2 905,150 + A4249_RS04370 0.49 -2.9 905,150 + A4249_RS04370 0.49 -1.5 905,150 + A4249_RS04370 0.49 -1.0 905,150 + A4249_RS04370 0.49 +0.7 905,151 - A4249_RS04370 0.49 +0.8 905,151 - A4249_RS04370 0.49 +1.4 905,198 + A4249_RS04370 0.53 -0.4 905,199 - A4249_RS04370 0.54 +0.1 905,252 + A4249_RS04370 0.58 -0.8 905,252 + A4249_RS04370 0.58 -1.5 905,253 - A4249_RS04370 0.58 +2.1 905,391 + A4249_RS04370 0.70 -1.3 905,392 - A4249_RS04370 0.70 +0.8
Or see this region's nucleotide sequence