Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03555

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03550 and A4249_RS03555 are separated by 29 nucleotidesA4249_RS03555 and A4249_RS03560 are separated by 183 nucleotidesA4249_RS03560 and A4249_RS03565 overlap by 4 nucleotides A4249_RS03550: A4249_RS03550 - glycosyl hydrolase family 28 protein, at 744,755 to 746,152 _RS03550 A4249_RS03555: A4249_RS03555 - pectate lyase, at 746,182 to 747,489 _RS03555 A4249_RS03560: A4249_RS03560 - hypothetical protein, at 747,673 to 748,098 _RS03560 A4249_RS03565: A4249_RS03565 - sorbosone dehydrogenase family protein, at 748,095 to 749,402 _RS03565 Position (kb) 746 747 748Strain fitness (log2 ratio) -2 -1 0 1at 745.202 kb on + strand, within A4249_RS03550at 745.202 kb on + strand, within A4249_RS03550at 745.202 kb on + strand, within A4249_RS03550at 745.203 kb on - strand, within A4249_RS03550at 745.203 kb on - strand, within A4249_RS03550at 745.223 kb on + strand, within A4249_RS03550at 745.224 kb on - strand, within A4249_RS03550at 745.224 kb on - strand, within A4249_RS03550at 745.224 kb on - strand, within A4249_RS03550at 745.224 kb on - strand, within A4249_RS03550at 745.290 kb on - strand, within A4249_RS03550at 745.290 kb on - strand, within A4249_RS03550at 745.362 kb on - strand, within A4249_RS03550at 745.362 kb on - strand, within A4249_RS03550at 745.376 kb on - strand, within A4249_RS03550at 745.389 kb on + strand, within A4249_RS03550at 745.389 kb on + strand, within A4249_RS03550at 745.389 kb on + strand, within A4249_RS03550at 745.389 kb on + strand, within A4249_RS03550at 745.389 kb on + strand, within A4249_RS03550at 745.389 kb on + strand, within A4249_RS03550at 745.390 kb on - strand, within A4249_RS03550at 745.390 kb on - strand, within A4249_RS03550at 745.390 kb on - strand, within A4249_RS03550at 745.390 kb on - strand, within A4249_RS03550at 745.402 kb on + strand, within A4249_RS03550at 745.402 kb on + strand, within A4249_RS03550at 745.403 kb on - strand, within A4249_RS03550at 745.403 kb on - strand, within A4249_RS03550at 745.403 kb on - strand, within A4249_RS03550at 745.403 kb on - strand, within A4249_RS03550at 745.692 kb on - strand, within A4249_RS03550at 745.797 kb on - strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.805 kb on + strand, within A4249_RS03550at 745.806 kb on - strand, within A4249_RS03550at 745.806 kb on - strand, within A4249_RS03550at 745.806 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.812 kb on - strand, within A4249_RS03550at 745.813 kb on - strand, within A4249_RS03550at 745.850 kb on + strand, within A4249_RS03550at 745.850 kb on + strand, within A4249_RS03550at 745.967 kb on + strand, within A4249_RS03550at 745.967 kb on + strand, within A4249_RS03550at 746.176 kb on - strandat 746.307 kb on + strandat 746.354 kb on - strand, within A4249_RS03555at 746.428 kb on - strand, within A4249_RS03555at 746.464 kb on + strand, within A4249_RS03555at 746.464 kb on + strand, within A4249_RS03555at 746.464 kb on + strand, within A4249_RS03555at 746.464 kb on + strand, within A4249_RS03555at 746.464 kb on + strand, within A4249_RS03555at 746.465 kb on - strand, within A4249_RS03555at 746.465 kb on - strand, within A4249_RS03555at 746.465 kb on - strand, within A4249_RS03555at 746.465 kb on - strand, within A4249_RS03555at 746.497 kb on + strand, within A4249_RS03555at 746.498 kb on - strand, within A4249_RS03555at 746.498 kb on - strand, within A4249_RS03555at 746.498 kb on - strand, within A4249_RS03555at 746.749 kb on + strand, within A4249_RS03555at 746.806 kb on + strand, within A4249_RS03555at 746.807 kb on - strand, within A4249_RS03555at 746.824 kb on + strand, within A4249_RS03555at 746.825 kb on - strand, within A4249_RS03555at 747.112 kb on + strand, within A4249_RS03555at 747.244 kb on + strand, within A4249_RS03555at 747.245 kb on - strand, within A4249_RS03555at 747.325 kb on + strand, within A4249_RS03555at 747.325 kb on + strand, within A4249_RS03555at 747.325 kb on + strand, within A4249_RS03555at 747.326 kb on - strand, within A4249_RS03555at 747.326 kb on - strand, within A4249_RS03555at 747.326 kb on - strand, within A4249_RS03555at 747.326 kb on - strand, within A4249_RS03555at 747.326 kb on - strand, within A4249_RS03555at 747.386 kb on + strandat 747.386 kb on + strandat 747.386 kb on + strandat 747.386 kb on + strandat 747.386 kb on + strandat 747.387 kb on - strandat 747.387 kb on - strandat 747.387 kb on - strandat 747.418 kb on + strandat 747.419 kb on - strandat 747.461 kb on - strandat 747.461 kb on - strandat 747.560 kb on + strandat 747.560 kb on + strandat 747.561 kb on - strandat 747.561 kb on - strandat 747.561 kb on - strandat 747.561 kb on - strandat 747.561 kb on - strandat 747.591 kb on + strandat 747.723 kb on - strand, within A4249_RS03560at 747.779 kb on - strand, within A4249_RS03560at 748.072 kb on + strandat 748.072 kb on + strandat 748.072 kb on + strandat 748.302 kb on - strand, within A4249_RS03565at 748.302 kb on - strand, within A4249_RS03565at 748.302 kb on - strand, within A4249_RS03565

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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745,202 + A4249_RS03550 0.32 -0.1
745,202 + A4249_RS03550 0.32 +0.2
745,202 + A4249_RS03550 0.32 -0.0
745,203 - A4249_RS03550 0.32 -0.3
745,203 - A4249_RS03550 0.32 -0.6
745,223 + A4249_RS03550 0.33 -0.1
745,224 - A4249_RS03550 0.34 -0.2
745,224 - A4249_RS03550 0.34 +1.6
745,224 - A4249_RS03550 0.34 -0.3
745,224 - A4249_RS03550 0.34 +1.0
745,290 - A4249_RS03550 0.38 -0.5
745,290 - A4249_RS03550 0.38 +0.6
745,362 - A4249_RS03550 0.43 +0.6
745,362 - A4249_RS03550 0.43 +0.4
745,376 - A4249_RS03550 0.44 -2.3
745,389 + A4249_RS03550 0.45 -0.3
745,389 + A4249_RS03550 0.45 -0.6
745,389 + A4249_RS03550 0.45 +0.2
745,389 + A4249_RS03550 0.45 +1.5
745,389 + A4249_RS03550 0.45 +0.6
745,389 + A4249_RS03550 0.45 -0.5
745,390 - A4249_RS03550 0.45 +0.7
745,390 - A4249_RS03550 0.45 +0.9
745,390 - A4249_RS03550 0.45 -1.3
745,390 - A4249_RS03550 0.45 +0.3
745,402 + A4249_RS03550 0.46 -0.4
745,402 + A4249_RS03550 0.46 -0.4
745,403 - A4249_RS03550 0.46 -1.8
745,403 - A4249_RS03550 0.46 +0.4
745,403 - A4249_RS03550 0.46 -0.2
745,403 - A4249_RS03550 0.46 +0.4
745,692 - A4249_RS03550 0.67 +0.0
745,797 - A4249_RS03550 0.75 -0.6
745,805 + A4249_RS03550 0.75 +0.4
745,805 + A4249_RS03550 0.75 +0.8
745,805 + A4249_RS03550 0.75 -0.3
745,805 + A4249_RS03550 0.75 -1.1
745,805 + A4249_RS03550 0.75 -0.1
745,805 + A4249_RS03550 0.75 +0.4
745,805 + A4249_RS03550 0.75 +1.1
745,806 - A4249_RS03550 0.75 -1.1
745,806 - A4249_RS03550 0.75 +0.9
745,806 - A4249_RS03550 0.75 -1.4
745,812 - A4249_RS03550 0.76 +0.4
745,812 - A4249_RS03550 0.76 +0.5
745,812 - A4249_RS03550 0.76 +0.4
745,812 - A4249_RS03550 0.76 +0.7
745,812 - A4249_RS03550 0.76 +0.4
745,812 - A4249_RS03550 0.76 +0.2
745,812 - A4249_RS03550 0.76 -0.0
745,812 - A4249_RS03550 0.76 -0.9
745,813 - A4249_RS03550 0.76 -0.9
745,850 + A4249_RS03550 0.78 -0.6
745,850 + A4249_RS03550 0.78 -0.4
745,967 + A4249_RS03550 0.87 -1.0
745,967 + A4249_RS03550 0.87 +0.2
746,176 - +1.1
746,307 + +1.4
746,354 - A4249_RS03555 0.13 -0.5
746,428 - A4249_RS03555 0.19 +0.2
746,464 + A4249_RS03555 0.22 -0.0
746,464 + A4249_RS03555 0.22 +0.3
746,464 + A4249_RS03555 0.22 +0.4
746,464 + A4249_RS03555 0.22 -0.1
746,464 + A4249_RS03555 0.22 -1.6
746,465 - A4249_RS03555 0.22 +0.9
746,465 - A4249_RS03555 0.22 -0.7
746,465 - A4249_RS03555 0.22 -0.0
746,465 - A4249_RS03555 0.22 -0.6
746,497 + A4249_RS03555 0.24 +0.2
746,498 - A4249_RS03555 0.24 +0.7
746,498 - A4249_RS03555 0.24 -1.0
746,498 - A4249_RS03555 0.24 +0.7
746,749 + A4249_RS03555 0.43 -0.3
746,806 + A4249_RS03555 0.48 -0.1
746,807 - A4249_RS03555 0.48 +0.3
746,824 + A4249_RS03555 0.49 +0.0
746,825 - A4249_RS03555 0.49 -0.2
747,112 + A4249_RS03555 0.71 +0.4
747,244 + A4249_RS03555 0.81 +0.1
747,245 - A4249_RS03555 0.81 +0.5
747,325 + A4249_RS03555 0.87 +0.8
747,325 + A4249_RS03555 0.87 +1.5
747,325 + A4249_RS03555 0.87 +0.4
747,326 - A4249_RS03555 0.87 -0.4
747,326 - A4249_RS03555 0.87 +0.1
747,326 - A4249_RS03555 0.87 -0.5
747,326 - A4249_RS03555 0.87 +0.7
747,326 - A4249_RS03555 0.87 -0.0
747,386 + -0.8
747,386 + -0.4
747,386 + +0.1
747,386 + -0.2
747,386 + -0.5
747,387 - +0.0
747,387 - +0.6
747,387 - +0.9
747,418 + -1.5
747,419 - +0.9
747,461 - +0.0
747,461 - +1.5
747,560 + -0.0
747,560 + -0.6
747,561 - +0.1
747,561 - +0.1
747,561 - +0.1
747,561 - +0.9
747,561 - -0.1
747,591 + +0.1
747,723 - A4249_RS03560 0.12 +0.5
747,779 - A4249_RS03560 0.25 +0.4
748,072 + -0.2
748,072 + +0.1
748,072 + +1.1
748,302 - A4249_RS03565 0.16 +0.4
748,302 - A4249_RS03565 0.16 +0.4
748,302 - A4249_RS03565 0.16 -1.1

Or see this region's nucleotide sequence