Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02610 and A4249_RS02615 are separated by 190 nucleotides A4249_RS02615 and A4249_RS02620 are separated by 76 nucleotides
A4249_RS02610: A4249_RS02610 - ribose-phosphate pyrophosphokinase, at 559,255 to 560,190
_RS02610
A4249_RS02615: A4249_RS02615 - outer membrane protein assembly factor BamD, at 560,381 to 561,235
_RS02615
A4249_RS02620: A4249_RS02620 - DNA repair protein RecN, at 561,312 to 563,009
_RS02620
Position (kb) 560
561
562 Strain fitness (log2 ratio) -2
-1
0
1
2 at 560.253 kb on + strand at 560.254 kb on - strand at 560.254 kb on - strand at 560.254 kb on - strand at 560.254 kb on - strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.281 kb on + strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.282 kb on - strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.326 kb on - strand at 560.326 kb on - strand at 560.326 kb on - strand at 560.404 kb on + strand at 561.134 kb on + strand, within A4249_RS02615 at 561.479 kb on + strand at 561.479 kb on + strand at 561.479 kb on + strand at 561.480 kb on - strand at 561.480 kb on - strand at 561.480 kb on - strand at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.763 kb on - strand, within A4249_RS02620 at 561.763 kb on - strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.947 kb on - strand, within A4249_RS02620 at 562.221 kb on + strand, within A4249_RS02620 at 562.221 kb on + strand, within A4249_RS02620 at 562.222 kb on - strand, within A4249_RS02620 at 562.222 kb on - strand, within A4249_RS02620
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 560,253 + +0.6 560,254 - -0.2 560,254 - -0.4 560,254 - +0.4 560,254 - -0.4 560,281 + -0.0 560,281 + +0.1 560,281 + +1.1 560,281 + -0.5 560,281 + +0.7 560,281 + +0.2 560,281 + +0.2 560,281 + -1.6 560,281 + -0.7 560,281 + -0.1 560,282 - -0.1 560,282 - -0.2 560,282 - +0.6 560,282 - -0.5 560,282 - +0.7 560,282 - +0.2 560,282 - +1.8 560,282 - -1.0 560,282 - -0.8 560,282 - -0.4 560,282 - -0.7 560,325 + -0.3 560,325 + -0.4 560,325 + -0.2 560,325 + +0.6 560,325 + -0.0 560,326 - +0.5 560,326 - +1.4 560,326 - +0.6 560,404 + -0.5 561,134 + A4249_RS02615 0.88 +0.7 561,479 + -0.1 561,479 + -0.7 561,479 + -0.9 561,480 - +2.1 561,480 - -0.4 561,480 - -0.6 561,633 + A4249_RS02620 0.19 +0.3 561,633 + A4249_RS02620 0.19 +0.0 561,633 + A4249_RS02620 0.19 -2.4 561,633 + A4249_RS02620 0.19 -0.3 561,633 + A4249_RS02620 0.19 +0.5 561,633 + A4249_RS02620 0.19 +0.3 561,634 - A4249_RS02620 0.19 -0.3 561,634 - A4249_RS02620 0.19 -0.8 561,634 - A4249_RS02620 0.19 -1.1 561,634 - A4249_RS02620 0.19 -0.7 561,763 - A4249_RS02620 0.27 -0.2 561,763 - A4249_RS02620 0.27 -1.2 561,946 + A4249_RS02620 0.37 -0.8 561,946 + A4249_RS02620 0.37 -0.6 561,946 + A4249_RS02620 0.37 -0.2 561,946 + A4249_RS02620 0.37 -0.1 561,946 + A4249_RS02620 0.37 +0.3 561,946 + A4249_RS02620 0.37 +0.7 561,946 + A4249_RS02620 0.37 -1.2 561,947 - A4249_RS02620 0.37 +0.7 562,221 + A4249_RS02620 0.54 -0.3 562,221 + A4249_RS02620 0.54 -1.7 562,222 - A4249_RS02620 0.54 -1.1 562,222 - A4249_RS02620 0.54 -0.9
Or see this region's nucleotide sequence