Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00290 and A4249_RS17065 are separated by 60 nucleotides A4249_RS17065 and A4249_RS00300 are separated by 46 nucleotides A4249_RS00300 and A4249_RS00305 overlap by 4 nucleotides A4249_RS00305 and A4249_RS00310 are separated by 100 nucleotides
A4249_RS00290: A4249_RS00290 - histidine phosphatase family protein, at 49,819 to 50,328
_RS00290
A4249_RS17065: A4249_RS17065 - methyltransferase domain-containing protein, at 50,389 to 51,132
_RS17065
A4249_RS00300: A4249_RS00300 - hydroxyacylglutathione hydrolase, at 51,179 to 51,907
_RS00300
A4249_RS00305: A4249_RS00305 - DUF4908 domain-containing protein, at 51,904 to 52,620
_RS00305
A4249_RS00310: A4249_RS00310 - acetoacetyl-CoA reductase, at 52,721 to 53,446
_RS00310
Position (kb) 51
52 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 50.341 kb on - strand at 50.492 kb on + strand, within A4249_RS17065 at 50.492 kb on + strand, within A4249_RS17065 at 50.492 kb on + strand, within A4249_RS17065 at 50.492 kb on + strand, within A4249_RS17065 at 50.493 kb on - strand, within A4249_RS17065 at 50.602 kb on + strand, within A4249_RS17065 at 50.603 kb on - strand, within A4249_RS17065 at 50.603 kb on - strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.884 kb on + strand, within A4249_RS17065 at 50.885 kb on - strand, within A4249_RS17065 at 51.099 kb on - strand at 51.141 kb on + strand at 51.141 kb on + strand at 51.141 kb on + strand at 51.142 kb on - strand at 51.142 kb on - strand at 51.142 kb on - strand at 51.142 kb on - strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.168 kb on - strand at 51.168 kb on - strand at 51.221 kb on + strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.695 kb on + strand, within A4249_RS00300 at 51.695 kb on + strand, within A4249_RS00300 at 51.695 kb on + strand, within A4249_RS00300 at 51.696 kb on - strand, within A4249_RS00300 at 51.696 kb on - strand, within A4249_RS00300 at 51.697 kb on + strand, within A4249_RS00300 at 51.697 kb on + strand, within A4249_RS00300 at 51.697 kb on + strand, within A4249_RS00300 at 51.697 kb on + strand, within A4249_RS00300 at 51.698 kb on - strand, within A4249_RS00300 at 51.698 kb on - strand, within A4249_RS00300 at 51.698 kb on - strand, within A4249_RS00300 at 51.698 kb on - strand, within A4249_RS00300 at 51.698 kb on - strand, within A4249_RS00300 at 51.698 kb on - strand, within A4249_RS00300 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.230 kb on - strand, within A4249_RS00305 at 52.734 kb on + strand at 52.734 kb on + strand at 52.734 kb on + strand at 52.734 kb on + strand at 52.734 kb on + strand at 52.773 kb on + strand at 52.774 kb on - strand at 52.774 kb on - strand at 52.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 50,341 - -0.3 50,492 + A4249_RS17065 0.14 +0.1 50,492 + A4249_RS17065 0.14 +1.2 50,492 + A4249_RS17065 0.14 +1.4 50,492 + A4249_RS17065 0.14 +1.7 50,493 - A4249_RS17065 0.14 +0.7 50,602 + A4249_RS17065 0.29 +1.3 50,603 - A4249_RS17065 0.29 +0.1 50,603 - A4249_RS17065 0.29 -0.6 50,606 + A4249_RS17065 0.29 +0.3 50,606 + A4249_RS17065 0.29 -0.4 50,606 + A4249_RS17065 0.29 -0.6 50,606 + A4249_RS17065 0.29 -0.2 50,606 + A4249_RS17065 0.29 -0.9 50,606 + A4249_RS17065 0.29 +0.8 50,607 - A4249_RS17065 0.29 +1.8 50,607 - A4249_RS17065 0.29 -1.1 50,607 - A4249_RS17065 0.29 -0.1 50,607 - A4249_RS17065 0.29 +1.3 50,607 - A4249_RS17065 0.29 +0.3 50,607 - A4249_RS17065 0.29 +1.0 50,607 - A4249_RS17065 0.29 +1.6 50,607 - A4249_RS17065 0.29 -0.2 50,884 + A4249_RS17065 0.67 -0.4 50,885 - A4249_RS17065 0.67 +1.4 51,099 - -0.4 51,141 + -3.1 51,141 + +0.8 51,141 + -0.9 51,142 - -0.6 51,142 - +0.6 51,142 - -0.2 51,142 - -0.1 51,143 + -0.0 51,143 + +0.8 51,143 + -0.4 51,143 + +0.4 51,143 + +0.1 51,143 + +0.5 51,143 + +0.9 51,143 + -1.2 51,143 + +0.2 51,143 + -0.7 51,144 - -0.1 51,144 - -0.4 51,144 - +0.3 51,144 - +0.7 51,144 - +0.8 51,144 - -0.1 51,144 - -0.8 51,168 - -0.5 51,168 - -1.2 51,221 + -0.2 51,222 - -0.1 51,222 - -0.4 51,222 - -0.1 51,695 + A4249_RS00300 0.71 -0.3 51,695 + A4249_RS00300 0.71 +0.0 51,695 + A4249_RS00300 0.71 -1.2 51,696 - A4249_RS00300 0.71 -0.5 51,696 - A4249_RS00300 0.71 -0.7 51,697 + A4249_RS00300 0.71 -1.4 51,697 + A4249_RS00300 0.71 -0.4 51,697 + A4249_RS00300 0.71 -1.0 51,697 + A4249_RS00300 0.71 +0.0 51,698 - A4249_RS00300 0.71 -0.5 51,698 - A4249_RS00300 0.71 +0.5 51,698 - A4249_RS00300 0.71 +0.0 51,698 - A4249_RS00300 0.71 -1.1 51,698 - A4249_RS00300 0.71 -0.1 51,698 - A4249_RS00300 0.71 +0.8 52,229 + A4249_RS00305 0.45 +1.7 52,229 + A4249_RS00305 0.45 -1.3 52,229 + A4249_RS00305 0.45 +1.1 52,229 + A4249_RS00305 0.45 -0.2 52,229 + A4249_RS00305 0.45 -0.0 52,229 + A4249_RS00305 0.45 +1.5 52,229 + A4249_RS00305 0.45 +0.5 52,230 - A4249_RS00305 0.45 -1.1 52,734 + +0.2 52,734 + -0.1 52,734 + +0.2 52,734 + -1.5 52,734 + -1.2 52,773 + +1.1 52,774 - +1.3 52,774 - +0.0 52,774 - -1.2
Or see this region's nucleotide sequence