Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00280 and A4249_RS00285 overlap by 4 nucleotides A4249_RS00285 and A4249_RS00290 overlap by 4 nucleotides A4249_RS00290 and A4249_RS17065 are separated by 60 nucleotides A4249_RS17065 and A4249_RS00300 are separated by 46 nucleotides
A4249_RS00280: A4249_RS00280 - quinone-dependent dihydroorotate dehydrogenase, at 48,435 to 49,481
_RS00280
A4249_RS00285: A4249_RS00285 - DUF952 domain-containing protein, at 49,478 to 49,822
_RS00285
A4249_RS00290: A4249_RS00290 - histidine phosphatase family protein, at 49,819 to 50,328
_RS00290
A4249_RS17065: A4249_RS17065 - methyltransferase domain-containing protein, at 50,389 to 51,132
_RS17065
A4249_RS00300: A4249_RS00300 - hydroxyacylglutathione hydrolase, at 51,179 to 51,907
_RS00300
Position (kb) 49
50
51 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 49.566 kb on + strand, within A4249_RS00285 at 49.566 kb on + strand, within A4249_RS00285 at 49.566 kb on + strand, within A4249_RS00285 at 49.567 kb on - strand, within A4249_RS00285 at 49.567 kb on - strand, within A4249_RS00285 at 49.722 kb on + strand, within A4249_RS00285 at 49.723 kb on - strand, within A4249_RS00285 at 49.723 kb on - strand, within A4249_RS00285 at 49.723 kb on - strand, within A4249_RS00285 at 49.755 kb on + strand, within A4249_RS00285 at 49.806 kb on + strand at 49.807 kb on - strand at 49.807 kb on - strand at 49.807 kb on - strand at 49.807 kb on - strand at 49.865 kb on + strand at 49.865 kb on + strand at 49.865 kb on + strand at 49.865 kb on + strand at 49.866 kb on - strand at 49.973 kb on + strand, within A4249_RS00290 at 50.085 kb on - strand, within A4249_RS00290 at 50.341 kb on - strand at 50.492 kb on + strand, within A4249_RS17065 at 50.492 kb on + strand, within A4249_RS17065 at 50.492 kb on + strand, within A4249_RS17065 at 50.492 kb on + strand, within A4249_RS17065 at 50.493 kb on - strand, within A4249_RS17065 at 50.602 kb on + strand, within A4249_RS17065 at 50.603 kb on - strand, within A4249_RS17065 at 50.603 kb on - strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.606 kb on + strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.607 kb on - strand, within A4249_RS17065 at 50.884 kb on + strand, within A4249_RS17065 at 50.885 kb on - strand, within A4249_RS17065 at 51.099 kb on - strand at 51.141 kb on + strand at 51.141 kb on + strand at 51.141 kb on + strand at 51.142 kb on - strand at 51.142 kb on - strand at 51.142 kb on - strand at 51.142 kb on - strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.168 kb on - strand at 51.168 kb on - strand at 51.221 kb on + strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.222 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 49,566 + A4249_RS00285 0.26 -0.4 49,566 + A4249_RS00285 0.26 -1.9 49,566 + A4249_RS00285 0.26 +0.9 49,567 - A4249_RS00285 0.26 -2.2 49,567 - A4249_RS00285 0.26 -0.8 49,722 + A4249_RS00285 0.71 +1.7 49,723 - A4249_RS00285 0.71 -0.8 49,723 - A4249_RS00285 0.71 +0.2 49,723 - A4249_RS00285 0.71 +1.0 49,755 + A4249_RS00285 0.80 +2.0 49,806 + +0.6 49,807 - +0.1 49,807 - -0.6 49,807 - +0.3 49,807 - -1.3 49,865 + +0.2 49,865 + +1.7 49,865 + +0.7 49,865 + -0.2 49,866 - -0.4 49,973 + A4249_RS00290 0.30 -0.2 50,085 - A4249_RS00290 0.52 -0.9 50,341 - -0.3 50,492 + A4249_RS17065 0.14 +0.1 50,492 + A4249_RS17065 0.14 +1.2 50,492 + A4249_RS17065 0.14 +1.4 50,492 + A4249_RS17065 0.14 +1.7 50,493 - A4249_RS17065 0.14 +0.7 50,602 + A4249_RS17065 0.29 +1.3 50,603 - A4249_RS17065 0.29 +0.1 50,603 - A4249_RS17065 0.29 -0.6 50,606 + A4249_RS17065 0.29 +0.3 50,606 + A4249_RS17065 0.29 -0.4 50,606 + A4249_RS17065 0.29 -0.6 50,606 + A4249_RS17065 0.29 -0.2 50,606 + A4249_RS17065 0.29 -0.9 50,606 + A4249_RS17065 0.29 +0.8 50,607 - A4249_RS17065 0.29 +1.8 50,607 - A4249_RS17065 0.29 -1.1 50,607 - A4249_RS17065 0.29 -0.1 50,607 - A4249_RS17065 0.29 +1.3 50,607 - A4249_RS17065 0.29 +0.3 50,607 - A4249_RS17065 0.29 +1.0 50,607 - A4249_RS17065 0.29 +1.6 50,607 - A4249_RS17065 0.29 -0.2 50,884 + A4249_RS17065 0.67 -0.4 50,885 - A4249_RS17065 0.67 +1.4 51,099 - -0.4 51,141 + -3.1 51,141 + +0.8 51,141 + -0.9 51,142 - -0.6 51,142 - +0.6 51,142 - -0.2 51,142 - -0.1 51,143 + -0.0 51,143 + +0.8 51,143 + -0.4 51,143 + +0.4 51,143 + +0.1 51,143 + +0.5 51,143 + +0.9 51,143 + -1.2 51,143 + +0.2 51,143 + -0.7 51,144 - -0.1 51,144 - -0.4 51,144 - +0.3 51,144 - +0.7 51,144 - +0.8 51,144 - -0.1 51,144 - -0.8 51,168 - -0.5 51,168 - -1.2 51,221 + -0.2 51,222 - -0.1 51,222 - -0.4 51,222 - -0.1
Or see this region's nucleotide sequence