Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16090 and A4249_RS16095 are separated by 64 nucleotides A4249_RS16095 and A4249_RS16100 are separated by 272 nucleotides A4249_RS16100 and A4249_RS16105 are separated by 29 nucleotides
A4249_RS16090: A4249_RS16090 - DUF1150 domain-containing protein, at 3,240,169 to 3,240,419
_RS16090
A4249_RS16095: A4249_RS16095 - Hsp20 family protein, at 3,240,484 to 3,240,921
_RS16095
A4249_RS16100: A4249_RS16100 - ammonium transporter, at 3,241,194 to 3,242,507
_RS16100
A4249_RS16105: A4249_RS16105 - glutamate synthase large subunit, at 3,242,537 to 3,247,048
_RS16105
Position (kb)
3241
3242
3243 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3240.274 kb on + strand, within A4249_RS16090 at 3240.274 kb on + strand, within A4249_RS16090 at 3240.274 kb on + strand, within A4249_RS16090 at 3240.274 kb on + strand, within A4249_RS16090 at 3240.275 kb on - strand, within A4249_RS16090 at 3240.275 kb on - strand, within A4249_RS16090 at 3240.358 kb on + strand, within A4249_RS16090 at 3240.358 kb on + strand, within A4249_RS16090 at 3240.358 kb on + strand, within A4249_RS16090 at 3240.358 kb on + strand, within A4249_RS16090 at 3240.358 kb on + strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.359 kb on - strand, within A4249_RS16090 at 3240.421 kb on - strand at 3240.421 kb on - strand at 3240.421 kb on - strand at 3240.437 kb on + strand at 3240.437 kb on + strand at 3240.437 kb on + strand at 3240.437 kb on + strand at 3240.438 kb on - strand at 3240.438 kb on - strand at 3240.438 kb on - strand at 3240.438 kb on - strand at 3240.438 kb on - strand at 3240.510 kb on + strand at 3240.510 kb on + strand at 3240.511 kb on - strand at 3240.511 kb on - strand at 3240.810 kb on - strand, within A4249_RS16095 at 3240.810 kb on - strand, within A4249_RS16095 at 3240.810 kb on - strand, within A4249_RS16095 at 3240.810 kb on - strand, within A4249_RS16095 at 3240.810 kb on - strand, within A4249_RS16095 at 3240.819 kb on - strand, within A4249_RS16095 at 3240.819 kb on - strand, within A4249_RS16095 at 3241.091 kb on + strand at 3241.092 kb on - strand at 3241.092 kb on - strand at 3241.092 kb on - strand at 3241.092 kb on - strand at 3241.126 kb on - strand at 3241.196 kb on - strand at 3241.220 kb on + strand at 3241.220 kb on + strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.221 kb on - strand at 3241.222 kb on + strand at 3241.222 kb on + strand at 3241.222 kb on + strand at 3241.223 kb on - strand at 3241.223 kb on - strand at 3241.468 kb on + strand, within A4249_RS16100 at 3241.468 kb on + strand, within A4249_RS16100 at 3241.504 kb on + strand, within A4249_RS16100 at 3241.504 kb on + strand, within A4249_RS16100 at 3241.504 kb on + strand, within A4249_RS16100 at 3241.504 kb on + strand, within A4249_RS16100 at 3241.505 kb on - strand, within A4249_RS16100 at 3241.505 kb on - strand, within A4249_RS16100 at 3241.505 kb on - strand, within A4249_RS16100 at 3241.505 kb on - strand, within A4249_RS16100 at 3241.790 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.792 kb on + strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.793 kb on - strand, within A4249_RS16100 at 3241.972 kb on + strand, within A4249_RS16100 at 3241.972 kb on + strand, within A4249_RS16100 at 3241.972 kb on + strand, within A4249_RS16100 at 3241.972 kb on + strand, within A4249_RS16100 at 3241.972 kb on + strand, within A4249_RS16100 at 3241.972 kb on + strand, within A4249_RS16100 at 3242.318 kb on - strand, within A4249_RS16100 at 3242.519 kb on - strand at 3242.519 kb on - strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.857 kb on + strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.858 kb on - strand at 3242.859 kb on + strand at 3242.859 kb on + strand at 3242.859 kb on + strand at 3242.859 kb on + strand at 3242.860 kb on - strand at 3242.860 kb on - strand at 3242.860 kb on - strand at 3242.860 kb on - strand at 3242.974 kb on - strand at 3242.974 kb on - strand at 3243.063 kb on + strand, within A4249_RS16105 at 3243.063 kb on + strand, within A4249_RS16105 at 3243.063 kb on + strand, within A4249_RS16105 at 3243.063 kb on + strand, within A4249_RS16105 at 3243.063 kb on + strand, within A4249_RS16105 at 3243.064 kb on - strand, within A4249_RS16105 at 3243.064 kb on - strand, within A4249_RS16105 at 3243.064 kb on - strand, within A4249_RS16105 at 3243.246 kb on + strand, within A4249_RS16105 at 3243.246 kb on + strand, within A4249_RS16105 at 3243.247 kb on - strand, within A4249_RS16105
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,240,274 + A4249_RS16090 0.42 -0.9 3,240,274 + A4249_RS16090 0.42 -0.1 3,240,274 + A4249_RS16090 0.42 +0.0 3,240,274 + A4249_RS16090 0.42 -0.3 3,240,275 - A4249_RS16090 0.42 +0.3 3,240,275 - A4249_RS16090 0.42 +0.5 3,240,358 + A4249_RS16090 0.75 -0.1 3,240,358 + A4249_RS16090 0.75 -0.5 3,240,358 + A4249_RS16090 0.75 -0.2 3,240,358 + A4249_RS16090 0.75 +0.5 3,240,358 + A4249_RS16090 0.75 +0.5 3,240,359 - A4249_RS16090 0.76 -0.2 3,240,359 - A4249_RS16090 0.76 +1.5 3,240,359 - A4249_RS16090 0.76 -0.2 3,240,359 - A4249_RS16090 0.76 +0.0 3,240,359 - A4249_RS16090 0.76 +0.0 3,240,359 - A4249_RS16090 0.76 +0.4 3,240,359 - A4249_RS16090 0.76 +0.1 3,240,359 - A4249_RS16090 0.76 -0.1 3,240,359 - A4249_RS16090 0.76 +0.5 3,240,359 - A4249_RS16090 0.76 -0.3 3,240,421 - -0.2 3,240,421 - +0.1 3,240,421 - -0.5 3,240,437 + -0.2 3,240,437 + +0.1 3,240,437 + +0.2 3,240,437 + +0.3 3,240,438 - -0.1 3,240,438 - -0.2 3,240,438 - +0.3 3,240,438 - -2.6 3,240,438 - -0.1 3,240,510 + -0.3 3,240,510 + -0.0 3,240,511 - +0.7 3,240,511 - +0.4 3,240,810 - A4249_RS16095 0.74 +0.2 3,240,810 - A4249_RS16095 0.74 +0.4 3,240,810 - A4249_RS16095 0.74 +0.7 3,240,810 - A4249_RS16095 0.74 +2.8 3,240,810 - A4249_RS16095 0.74 +0.7 3,240,819 - A4249_RS16095 0.76 -0.3 3,240,819 - A4249_RS16095 0.76 +0.1 3,241,091 + +0.5 3,241,092 - -0.1 3,241,092 - +0.1 3,241,092 - +0.2 3,241,092 - -0.6 3,241,126 - -0.6 3,241,196 - +0.2 3,241,220 + -0.4 3,241,220 + +0.0 3,241,221 - -0.1 3,241,221 - -0.7 3,241,221 - -0.4 3,241,221 - +0.1 3,241,221 - +0.3 3,241,221 - +0.0 3,241,221 - -0.3 3,241,221 - -0.5 3,241,222 + -0.1 3,241,222 + -0.2 3,241,222 + +0.1 3,241,223 - +0.1 3,241,223 - +0.7 3,241,468 + A4249_RS16100 0.21 +0.6 3,241,468 + A4249_RS16100 0.21 -0.6 3,241,504 + A4249_RS16100 0.24 -0.5 3,241,504 + A4249_RS16100 0.24 -0.0 3,241,504 + A4249_RS16100 0.24 +0.2 3,241,504 + A4249_RS16100 0.24 -2.5 3,241,505 - A4249_RS16100 0.24 -0.4 3,241,505 - A4249_RS16100 0.24 +0.0 3,241,505 - A4249_RS16100 0.24 +0.6 3,241,505 - A4249_RS16100 0.24 +0.7 3,241,790 + A4249_RS16100 0.45 +1.0 3,241,792 + A4249_RS16100 0.46 -1.3 3,241,792 + A4249_RS16100 0.46 +0.3 3,241,792 + A4249_RS16100 0.46 +0.7 3,241,792 + A4249_RS16100 0.46 +0.7 3,241,792 + A4249_RS16100 0.46 -0.1 3,241,792 + A4249_RS16100 0.46 +0.0 3,241,792 + A4249_RS16100 0.46 -0.8 3,241,792 + A4249_RS16100 0.46 +0.1 3,241,792 + A4249_RS16100 0.46 -0.2 3,241,793 - A4249_RS16100 0.46 -0.1 3,241,793 - A4249_RS16100 0.46 -0.0 3,241,793 - A4249_RS16100 0.46 +0.2 3,241,793 - A4249_RS16100 0.46 +0.2 3,241,793 - A4249_RS16100 0.46 +0.3 3,241,793 - A4249_RS16100 0.46 +0.1 3,241,793 - A4249_RS16100 0.46 -0.6 3,241,793 - A4249_RS16100 0.46 +0.8 3,241,793 - A4249_RS16100 0.46 +0.3 3,241,972 + A4249_RS16100 0.59 -1.2 3,241,972 + A4249_RS16100 0.59 -0.1 3,241,972 + A4249_RS16100 0.59 +0.7 3,241,972 + A4249_RS16100 0.59 +0.2 3,241,972 + A4249_RS16100 0.59 -0.2 3,241,972 + A4249_RS16100 0.59 +0.7 3,242,318 - A4249_RS16100 0.86 +0.0 3,242,519 - +0.6 3,242,519 - +0.2 3,242,857 + -0.7 3,242,857 + -1.5 3,242,857 + -0.1 3,242,857 + +0.3 3,242,857 + +0.4 3,242,857 + +0.3 3,242,857 + -0.4 3,242,857 + +0.8 3,242,858 - +0.6 3,242,858 - +0.3 3,242,858 - -0.5 3,242,858 - +1.1 3,242,858 - +0.6 3,242,858 - -0.2 3,242,858 - +0.1 3,242,858 - +1.0 3,242,858 - -0.1 3,242,859 + +0.6 3,242,859 + -0.1 3,242,859 + -0.2 3,242,859 + +0.5 3,242,860 - +1.3 3,242,860 - -0.2 3,242,860 - -0.2 3,242,860 - +0.1 3,242,974 - +1.7 3,242,974 - +0.7 3,243,063 + A4249_RS16105 0.12 +0.1 3,243,063 + A4249_RS16105 0.12 -0.0 3,243,063 + A4249_RS16105 0.12 +1.5 3,243,063 + A4249_RS16105 0.12 -0.2 3,243,063 + A4249_RS16105 0.12 +0.2 3,243,064 - A4249_RS16105 0.12 -0.3 3,243,064 - A4249_RS16105 0.12 -0.5 3,243,064 - A4249_RS16105 0.12 +3.2 3,243,246 + A4249_RS16105 0.16 -0.3 3,243,246 + A4249_RS16105 0.16 +0.5 3,243,247 - A4249_RS16105 0.16 +1.1
Or see this region's nucleotide sequence