Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15985 and A4249_RS15990 overlap by 4 nucleotides A4249_RS15990 and A4249_RS15995 overlap by 4 nucleotides A4249_RS15995 and A4249_RS16000 are separated by 123 nucleotides
A4249_RS15985: A4249_RS15985 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 3,223,539 to 3,224,339
_RS15985
A4249_RS15990: A4249_RS15990 - nucleotidyltransferase family protein, at 3,224,336 to 3,224,911
_RS15990
A4249_RS15995: A4249_RS15995 - DUF983 domain-containing protein, at 3,224,908 to 3,225,297
_RS15995
A4249_RS16000: A4249_RS16000 - hypothetical protein, at 3,225,421 to 3,228,270
_RS16000
Position (kb)
3224
3225
3226 Strain fitness (log2 ratio)
-2
-1
0
1 at 3224.456 kb on + strand, within A4249_RS15990 at 3224.457 kb on - strand, within A4249_RS15990 at 3224.457 kb on - strand, within A4249_RS15990 at 3224.457 kb on - strand, within A4249_RS15990 at 3224.514 kb on - strand, within A4249_RS15990 at 3224.514 kb on - strand, within A4249_RS15990 at 3224.514 kb on - strand, within A4249_RS15990 at 3224.525 kb on + strand, within A4249_RS15990 at 3224.526 kb on - strand, within A4249_RS15990 at 3224.549 kb on + strand, within A4249_RS15990 at 3224.549 kb on + strand, within A4249_RS15990 at 3224.549 kb on + strand, within A4249_RS15990 at 3224.549 kb on + strand, within A4249_RS15990 at 3224.550 kb on - strand, within A4249_RS15990 at 3224.550 kb on - strand, within A4249_RS15990 at 3224.550 kb on - strand, within A4249_RS15990 at 3224.550 kb on - strand, within A4249_RS15990 at 3224.675 kb on + strand, within A4249_RS15990 at 3224.675 kb on + strand, within A4249_RS15990 at 3224.676 kb on - strand, within A4249_RS15990 at 3224.676 kb on - strand, within A4249_RS15990 at 3224.676 kb on - strand, within A4249_RS15990 at 3224.676 kb on - strand, within A4249_RS15990 at 3224.909 kb on + strand at 3224.909 kb on + strand at 3224.909 kb on + strand at 3224.909 kb on + strand at 3224.910 kb on - strand at 3224.910 kb on - strand at 3224.910 kb on - strand at 3224.910 kb on - strand at 3224.910 kb on - strand at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.966 kb on + strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3224.967 kb on - strand, within A4249_RS15995 at 3225.167 kb on + strand, within A4249_RS15995 at 3225.167 kb on + strand, within A4249_RS15995 at 3225.167 kb on + strand, within A4249_RS15995 at 3225.168 kb on - strand, within A4249_RS15995 at 3225.209 kb on + strand, within A4249_RS15995 at 3225.209 kb on + strand, within A4249_RS15995 at 3225.306 kb on + strand at 3225.306 kb on + strand at 3225.306 kb on + strand at 3225.307 kb on - strand at 3225.317 kb on - strand at 3225.317 kb on - strand at 3225.348 kb on + strand at 3225.349 kb on - strand at 3225.349 kb on - strand at 3225.390 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.420 kb on + strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.421 kb on - strand at 3225.556 kb on - strand at 3225.829 kb on + strand, within A4249_RS16000 at 3225.829 kb on + strand, within A4249_RS16000 at 3225.829 kb on + strand, within A4249_RS16000 at 3225.829 kb on + strand, within A4249_RS16000 at 3225.829 kb on + strand, within A4249_RS16000 at 3225.830 kb on - strand, within A4249_RS16000 at 3225.830 kb on - strand, within A4249_RS16000 at 3225.830 kb on - strand, within A4249_RS16000 at 3225.830 kb on - strand, within A4249_RS16000 at 3226.023 kb on + strand, within A4249_RS16000 at 3226.023 kb on + strand, within A4249_RS16000 at 3226.023 kb on + strand, within A4249_RS16000 at 3226.024 kb on - strand, within A4249_RS16000 at 3226.024 kb on - strand, within A4249_RS16000 at 3226.024 kb on - strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.084 kb on + strand, within A4249_RS16000 at 3226.085 kb on - strand, within A4249_RS16000 at 3226.085 kb on - strand, within A4249_RS16000 at 3226.086 kb on + strand, within A4249_RS16000 at 3226.086 kb on + strand, within A4249_RS16000 at 3226.086 kb on + strand, within A4249_RS16000 at 3226.086 kb on + strand, within A4249_RS16000 at 3226.087 kb on - strand, within A4249_RS16000
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,224,456 + A4249_RS15990 0.21 +0.1 3,224,457 - A4249_RS15990 0.21 +0.4 3,224,457 - A4249_RS15990 0.21 +0.4 3,224,457 - A4249_RS15990 0.21 -0.8 3,224,514 - A4249_RS15990 0.31 +1.4 3,224,514 - A4249_RS15990 0.31 +0.0 3,224,514 - A4249_RS15990 0.31 -0.5 3,224,525 + A4249_RS15990 0.33 -0.6 3,224,526 - A4249_RS15990 0.33 +0.3 3,224,549 + A4249_RS15990 0.37 -0.1 3,224,549 + A4249_RS15990 0.37 +0.5 3,224,549 + A4249_RS15990 0.37 +0.1 3,224,549 + A4249_RS15990 0.37 -1.0 3,224,550 - A4249_RS15990 0.37 +0.4 3,224,550 - A4249_RS15990 0.37 +0.2 3,224,550 - A4249_RS15990 0.37 +0.7 3,224,550 - A4249_RS15990 0.37 -0.9 3,224,675 + A4249_RS15990 0.59 +0.7 3,224,675 + A4249_RS15990 0.59 +0.1 3,224,676 - A4249_RS15990 0.59 -0.0 3,224,676 - A4249_RS15990 0.59 +0.4 3,224,676 - A4249_RS15990 0.59 +0.5 3,224,676 - A4249_RS15990 0.59 +0.3 3,224,909 + -0.3 3,224,909 + -0.6 3,224,909 + -0.2 3,224,909 + -0.3 3,224,910 - +0.2 3,224,910 - +0.4 3,224,910 - -0.2 3,224,910 - +0.6 3,224,910 - -1.5 3,224,966 + A4249_RS15995 0.15 +0.8 3,224,966 + A4249_RS15995 0.15 +0.1 3,224,966 + A4249_RS15995 0.15 -0.3 3,224,966 + A4249_RS15995 0.15 -0.4 3,224,966 + A4249_RS15995 0.15 -0.7 3,224,966 + A4249_RS15995 0.15 -0.6 3,224,966 + A4249_RS15995 0.15 -0.1 3,224,966 + A4249_RS15995 0.15 +0.5 3,224,966 + A4249_RS15995 0.15 -0.0 3,224,966 + A4249_RS15995 0.15 +0.7 3,224,966 + A4249_RS15995 0.15 -0.9 3,224,966 + A4249_RS15995 0.15 -0.2 3,224,966 + A4249_RS15995 0.15 -0.2 3,224,967 - A4249_RS15995 0.15 -0.0 3,224,967 - A4249_RS15995 0.15 -0.1 3,224,967 - A4249_RS15995 0.15 -0.8 3,224,967 - A4249_RS15995 0.15 -0.4 3,224,967 - A4249_RS15995 0.15 -0.3 3,224,967 - A4249_RS15995 0.15 +0.3 3,224,967 - A4249_RS15995 0.15 -0.6 3,224,967 - A4249_RS15995 0.15 -1.9 3,224,967 - A4249_RS15995 0.15 -0.4 3,224,967 - A4249_RS15995 0.15 -0.2 3,224,967 - A4249_RS15995 0.15 -1.1 3,224,967 - A4249_RS15995 0.15 -2.0 3,224,967 - A4249_RS15995 0.15 +0.2 3,225,167 + A4249_RS15995 0.66 -0.1 3,225,167 + A4249_RS15995 0.66 +1.7 3,225,167 + A4249_RS15995 0.66 +0.2 3,225,168 - A4249_RS15995 0.67 +0.4 3,225,209 + A4249_RS15995 0.77 +0.6 3,225,209 + A4249_RS15995 0.77 +0.4 3,225,306 + -0.0 3,225,306 + +0.4 3,225,306 + -0.3 3,225,307 - +0.2 3,225,317 - -0.1 3,225,317 - -0.2 3,225,348 + +0.4 3,225,349 - -0.7 3,225,349 - -1.0 3,225,390 + +0.8 3,225,420 + +0.1 3,225,420 + +0.2 3,225,420 + +1.3 3,225,420 + +0.4 3,225,420 + -0.3 3,225,420 + +0.1 3,225,420 + +0.2 3,225,420 + -0.7 3,225,420 + -1.3 3,225,421 - -0.1 3,225,421 - +0.1 3,225,421 - +0.5 3,225,421 - +0.1 3,225,421 - -0.2 3,225,421 - +0.2 3,225,421 - -0.6 3,225,421 - -0.1 3,225,421 - +0.8 3,225,421 - +0.1 3,225,421 - -0.2 3,225,421 - +0.1 3,225,421 - +1.2 3,225,421 - -0.5 3,225,556 - +0.3 3,225,829 + A4249_RS16000 0.14 +0.7 3,225,829 + A4249_RS16000 0.14 +0.2 3,225,829 + A4249_RS16000 0.14 +0.1 3,225,829 + A4249_RS16000 0.14 -0.3 3,225,829 + A4249_RS16000 0.14 -0.1 3,225,830 - A4249_RS16000 0.14 +0.0 3,225,830 - A4249_RS16000 0.14 -0.2 3,225,830 - A4249_RS16000 0.14 -0.5 3,225,830 - A4249_RS16000 0.14 +0.7 3,226,023 + A4249_RS16000 0.21 +0.2 3,226,023 + A4249_RS16000 0.21 +1.5 3,226,023 + A4249_RS16000 0.21 -0.5 3,226,024 - A4249_RS16000 0.21 +0.1 3,226,024 - A4249_RS16000 0.21 +0.3 3,226,024 - A4249_RS16000 0.21 +1.0 3,226,084 + A4249_RS16000 0.23 +0.0 3,226,084 + A4249_RS16000 0.23 +0.6 3,226,084 + A4249_RS16000 0.23 +0.3 3,226,084 + A4249_RS16000 0.23 -0.2 3,226,084 + A4249_RS16000 0.23 +0.0 3,226,084 + A4249_RS16000 0.23 -0.1 3,226,084 + A4249_RS16000 0.23 +0.3 3,226,085 - A4249_RS16000 0.23 +0.1 3,226,085 - A4249_RS16000 0.23 -0.1 3,226,086 + A4249_RS16000 0.23 +0.6 3,226,086 + A4249_RS16000 0.23 +0.1 3,226,086 + A4249_RS16000 0.23 +0.5 3,226,086 + A4249_RS16000 0.23 -0.3 3,226,087 - A4249_RS16000 0.23 +0.4
Or see this region's nucleotide sequence