Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15800

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15795 and A4249_RS15800 are separated by 111 nucleotidesA4249_RS15800 and A4249_RS15805 are separated by 47 nucleotidesA4249_RS15805 and A4249_RS15810 are separated by 22 nucleotides A4249_RS15795: A4249_RS15795 - zinc-dependent alcohol dehydrogenase family protein, at 3,194,054 to 3,195,184 _RS15795 A4249_RS15800: A4249_RS15800 - thioesterase family protein, at 3,195,296 to 3,195,730 _RS15800 A4249_RS15805: A4249_RS15805 - MarR family transcriptional regulator, at 3,195,778 to 3,196,311 _RS15805 A4249_RS15810: A4249_RS15810 - retropepsin-like aspartic protease, at 3,196,334 to 3,197,242 _RS15810 Position (kb) 3195 3196Strain fitness (log2 ratio) -2 -1 0 1 2at 3195.129 kb on + strandat 3195.212 kb on + strandat 3195.213 kb on - strandat 3195.213 kb on - strandat 3195.213 kb on - strandat 3195.231 kb on + strandat 3195.232 kb on - strandat 3195.232 kb on - strandat 3195.232 kb on - strandat 3195.232 kb on - strandat 3195.246 kb on + strandat 3195.246 kb on + strandat 3195.246 kb on + strandat 3195.246 kb on + strandat 3195.246 kb on + strandat 3195.246 kb on + strandat 3195.247 kb on - strandat 3195.338 kb on + strandat 3195.338 kb on + strandat 3195.338 kb on + strandat 3195.338 kb on + strandat 3195.338 kb on + strandat 3195.339 kb on - strandat 3195.339 kb on - strandat 3195.339 kb on - strandat 3195.339 kb on - strandat 3195.339 kb on - strandat 3195.339 kb on - strandat 3195.339 kb on - strandat 3195.386 kb on + strand, within A4249_RS15800at 3195.394 kb on + strand, within A4249_RS15800at 3195.395 kb on - strand, within A4249_RS15800at 3195.395 kb on - strand, within A4249_RS15800at 3195.413 kb on + strand, within A4249_RS15800at 3195.413 kb on + strand, within A4249_RS15800at 3195.414 kb on - strand, within A4249_RS15800at 3195.507 kb on - strand, within A4249_RS15800at 3195.507 kb on - strand, within A4249_RS15800at 3195.507 kb on - strand, within A4249_RS15800at 3195.584 kb on + strand, within A4249_RS15800at 3195.585 kb on - strand, within A4249_RS15800at 3195.650 kb on + strand, within A4249_RS15800at 3195.650 kb on + strand, within A4249_RS15800at 3195.651 kb on - strand, within A4249_RS15800at 3195.651 kb on - strand, within A4249_RS15800at 3195.651 kb on - strand, within A4249_RS15800at 3195.717 kb on + strandat 3195.717 kb on + strandat 3195.717 kb on + strandat 3195.718 kb on - strandat 3195.718 kb on - strandat 3195.718 kb on - strandat 3195.718 kb on - strandat 3195.784 kb on + strandat 3195.784 kb on + strandat 3195.784 kb on + strandat 3195.784 kb on + strandat 3195.784 kb on + strandat 3195.785 kb on - strandat 3195.785 kb on - strandat 3195.785 kb on - strandat 3195.814 kb on + strandat 3195.814 kb on + strandat 3195.814 kb on + strandat 3195.815 kb on - strandat 3195.815 kb on - strandat 3195.955 kb on + strand, within A4249_RS15805at 3195.955 kb on + strand, within A4249_RS15805at 3195.956 kb on - strand, within A4249_RS15805at 3195.956 kb on - strand, within A4249_RS15805at 3195.956 kb on - strand, within A4249_RS15805at 3195.957 kb on + strand, within A4249_RS15805at 3195.957 kb on + strand, within A4249_RS15805at 3195.957 kb on + strand, within A4249_RS15805at 3195.957 kb on + strand, within A4249_RS15805at 3195.957 kb on + strand, within A4249_RS15805at 3195.958 kb on - strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.982 kb on + strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3195.983 kb on - strand, within A4249_RS15805at 3196.043 kb on + strand, within A4249_RS15805at 3196.068 kb on + strand, within A4249_RS15805at 3196.503 kb on + strand, within A4249_RS15810at 3196.503 kb on + strand, within A4249_RS15810at 3196.504 kb on - strand, within A4249_RS15810at 3196.504 kb on - strand, within A4249_RS15810at 3196.689 kb on + strand, within A4249_RS15810at 3196.689 kb on + strand, within A4249_RS15810at 3196.689 kb on + strand, within A4249_RS15810at 3196.689 kb on + strand, within A4249_RS15810at 3196.690 kb on - strand, within A4249_RS15810at 3196.690 kb on - strand, within A4249_RS15810at 3196.690 kb on - strand, within A4249_RS15810at 3196.690 kb on - strand, within A4249_RS15810at 3196.690 kb on - strand, within A4249_RS15810

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,195,129 + +0.5
3,195,212 + -0.6
3,195,213 - +0.0
3,195,213 - -0.5
3,195,213 - -0.4
3,195,231 + +0.3
3,195,232 - -0.7
3,195,232 - +0.4
3,195,232 - +0.5
3,195,232 - +0.3
3,195,246 + -0.3
3,195,246 + -2.3
3,195,246 + -0.1
3,195,246 + -0.0
3,195,246 + +0.7
3,195,246 + -0.3
3,195,247 - -0.7
3,195,338 + +1.0
3,195,338 + +0.8
3,195,338 + -0.2
3,195,338 + +0.5
3,195,338 + +0.3
3,195,339 - +0.1
3,195,339 - +0.1
3,195,339 - -0.8
3,195,339 - -1.2
3,195,339 - -0.1
3,195,339 - +0.7
3,195,339 - +0.0
3,195,386 + A4249_RS15800 0.21 -0.1
3,195,394 + A4249_RS15800 0.23 -0.6
3,195,395 - A4249_RS15800 0.23 -0.2
3,195,395 - A4249_RS15800 0.23 -0.5
3,195,413 + A4249_RS15800 0.27 -0.7
3,195,413 + A4249_RS15800 0.27 -0.2
3,195,414 - A4249_RS15800 0.27 +0.6
3,195,507 - A4249_RS15800 0.49 -0.9
3,195,507 - A4249_RS15800 0.49 +0.1
3,195,507 - A4249_RS15800 0.49 +0.1
3,195,584 + A4249_RS15800 0.66 -0.3
3,195,585 - A4249_RS15800 0.66 -0.1
3,195,650 + A4249_RS15800 0.81 -0.9
3,195,650 + A4249_RS15800 0.81 -1.7
3,195,651 - A4249_RS15800 0.82 +0.2
3,195,651 - A4249_RS15800 0.82 -0.6
3,195,651 - A4249_RS15800 0.82 +0.3
3,195,717 + +0.3
3,195,717 + +0.5
3,195,717 + +0.6
3,195,718 - -0.3
3,195,718 - -0.2
3,195,718 - +0.4
3,195,718 - -0.6
3,195,784 + +0.5
3,195,784 + -0.4
3,195,784 + -0.3
3,195,784 + +0.3
3,195,784 + +0.9
3,195,785 - -0.9
3,195,785 - -0.3
3,195,785 - -2.3
3,195,814 + +1.7
3,195,814 + +1.0
3,195,814 + -0.1
3,195,815 - -0.0
3,195,815 - -1.5
3,195,955 + A4249_RS15805 0.33 -0.2
3,195,955 + A4249_RS15805 0.33 -0.6
3,195,956 - A4249_RS15805 0.33 -0.9
3,195,956 - A4249_RS15805 0.33 -0.1
3,195,956 - A4249_RS15805 0.33 +0.8
3,195,957 + A4249_RS15805 0.34 -0.1
3,195,957 + A4249_RS15805 0.34 -0.6
3,195,957 + A4249_RS15805 0.34 +0.3
3,195,957 + A4249_RS15805 0.34 -0.1
3,195,957 + A4249_RS15805 0.34 -1.2
3,195,958 - A4249_RS15805 0.34 -0.8
3,195,982 + A4249_RS15805 0.38 -0.3
3,195,982 + A4249_RS15805 0.38 +0.4
3,195,982 + A4249_RS15805 0.38 +0.5
3,195,982 + A4249_RS15805 0.38 -0.2
3,195,982 + A4249_RS15805 0.38 +1.8
3,195,982 + A4249_RS15805 0.38 +0.1
3,195,982 + A4249_RS15805 0.38 -0.7
3,195,983 - A4249_RS15805 0.38 +1.7
3,195,983 - A4249_RS15805 0.38 +0.5
3,195,983 - A4249_RS15805 0.38 +0.3
3,195,983 - A4249_RS15805 0.38 -0.3
3,195,983 - A4249_RS15805 0.38 -0.4
3,195,983 - A4249_RS15805 0.38 +0.3
3,195,983 - A4249_RS15805 0.38 -0.5
3,195,983 - A4249_RS15805 0.38 +0.3
3,195,983 - A4249_RS15805 0.38 -1.5
3,196,043 + A4249_RS15805 0.50 -1.2
3,196,068 + A4249_RS15805 0.54 -0.3
3,196,503 + A4249_RS15810 0.19 +0.5
3,196,503 + A4249_RS15810 0.19 +0.1
3,196,504 - A4249_RS15810 0.19 -0.3
3,196,504 - A4249_RS15810 0.19 +0.6
3,196,689 + A4249_RS15810 0.39 -0.3
3,196,689 + A4249_RS15810 0.39 -0.7
3,196,689 + A4249_RS15810 0.39 -0.7
3,196,689 + A4249_RS15810 0.39 +0.7
3,196,690 - A4249_RS15810 0.39 +0.3
3,196,690 - A4249_RS15810 0.39 -0.7
3,196,690 - A4249_RS15810 0.39 +0.1
3,196,690 - A4249_RS15810 0.39 -0.3
3,196,690 - A4249_RS15810 0.39 -0.1

Or see this region's nucleotide sequence