Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15045 and A4249_RS15050 are separated by 72 nucleotides A4249_RS15050 and A4249_RS15055 are separated by 58 nucleotides A4249_RS15055 and A4249_RS15060 overlap by 35 nucleotides
A4249_RS15045: A4249_RS15045 - PBP1A family penicillin-binding protein, at 3,043,357 to 3,045,450
_RS15045
A4249_RS15050: A4249_RS15050 - lysozyme inhibitor LprI family protein, at 3,045,523 to 3,045,900
_RS15050
A4249_RS15055: A4249_RS15055 - SprT family zinc-dependent metalloprotease, at 3,045,959 to 3,046,681
_RS15055
A4249_RS15060: A4249_RS15060 - polyhydroxyalkanoate depolymerase, at 3,046,647 to 3,047,927
_RS15060
Position (kb)
3045
3046
3047 Strain fitness (log2 ratio)
-2
-1
0
1 at 3045.299 kb on - strand at 3045.299 kb on - strand at 3045.630 kb on - strand, within A4249_RS15050 at 3045.758 kb on + strand, within A4249_RS15050 at 3045.758 kb on + strand, within A4249_RS15050 at 3045.759 kb on - strand, within A4249_RS15050 at 3046.053 kb on + strand, within A4249_RS15055 at 3046.053 kb on + strand, within A4249_RS15055 at 3046.054 kb on - strand, within A4249_RS15055 at 3046.054 kb on - strand, within A4249_RS15055 at 3046.107 kb on + strand, within A4249_RS15055 at 3046.314 kb on + strand, within A4249_RS15055 at 3046.394 kb on + strand, within A4249_RS15055 at 3046.394 kb on + strand, within A4249_RS15055 at 3046.723 kb on + strand at 3046.724 kb on - strand at 3046.724 kb on - strand at 3046.724 kb on - strand at 3046.762 kb on + strand at 3046.763 kb on - strand at 3046.786 kb on + strand, within A4249_RS15060 at 3046.786 kb on + strand, within A4249_RS15060 at 3046.787 kb on - strand, within A4249_RS15060 at 3046.787 kb on - strand, within A4249_RS15060 at 3046.787 kb on - strand, within A4249_RS15060 at 3046.787 kb on - strand, within A4249_RS15060 at 3046.993 kb on + strand, within A4249_RS15060 at 3046.993 kb on + strand, within A4249_RS15060 at 3046.993 kb on + strand, within A4249_RS15060 at 3046.993 kb on + strand, within A4249_RS15060 at 3046.993 kb on + strand, within A4249_RS15060 at 3046.994 kb on - strand, within A4249_RS15060 at 3046.994 kb on - strand, within A4249_RS15060 at 3046.994 kb on - strand, within A4249_RS15060 at 3046.994 kb on - strand, within A4249_RS15060 at 3047.026 kb on + strand, within A4249_RS15060 at 3047.026 kb on + strand, within A4249_RS15060 at 3047.027 kb on - strand, within A4249_RS15060 at 3047.027 kb on - strand, within A4249_RS15060 at 3047.027 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.143 kb on + strand, within A4249_RS15060 at 3047.144 kb on - strand, within A4249_RS15060 at 3047.144 kb on - strand, within A4249_RS15060 at 3047.188 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.447 kb on - strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.566 kb on + strand, within A4249_RS15060 at 3047.566 kb on + strand, within A4249_RS15060 at 3047.566 kb on + strand, within A4249_RS15060 at 3047.567 kb on - strand, within A4249_RS15060 at 3047.567 kb on - strand, within A4249_RS15060 at 3047.567 kb on - strand, within A4249_RS15060
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,045,299 - -0.7 3,045,299 - +0.7 3,045,630 - A4249_RS15050 0.28 -0.2 3,045,758 + A4249_RS15050 0.62 -0.3 3,045,758 + A4249_RS15050 0.62 -0.0 3,045,759 - A4249_RS15050 0.62 -0.9 3,046,053 + A4249_RS15055 0.13 -2.1 3,046,053 + A4249_RS15055 0.13 +0.1 3,046,054 - A4249_RS15055 0.13 +0.2 3,046,054 - A4249_RS15055 0.13 -1.1 3,046,107 + A4249_RS15055 0.20 +1.0 3,046,314 + A4249_RS15055 0.49 -0.2 3,046,394 + A4249_RS15055 0.60 -0.2 3,046,394 + A4249_RS15055 0.60 +1.2 3,046,723 + -0.3 3,046,724 - -0.0 3,046,724 - -0.6 3,046,724 - -0.3 3,046,762 + -0.1 3,046,763 - +1.2 3,046,786 + A4249_RS15060 0.11 -0.7 3,046,786 + A4249_RS15060 0.11 +0.1 3,046,787 - A4249_RS15060 0.11 -0.3 3,046,787 - A4249_RS15060 0.11 +0.1 3,046,787 - A4249_RS15060 0.11 +0.0 3,046,787 - A4249_RS15060 0.11 -0.3 3,046,993 + A4249_RS15060 0.27 -0.0 3,046,993 + A4249_RS15060 0.27 +0.8 3,046,993 + A4249_RS15060 0.27 +0.4 3,046,993 + A4249_RS15060 0.27 -0.9 3,046,993 + A4249_RS15060 0.27 -0.4 3,046,994 - A4249_RS15060 0.27 -0.2 3,046,994 - A4249_RS15060 0.27 -0.5 3,046,994 - A4249_RS15060 0.27 +1.0 3,046,994 - A4249_RS15060 0.27 -0.4 3,047,026 + A4249_RS15060 0.30 -2.7 3,047,026 + A4249_RS15060 0.30 -0.3 3,047,027 - A4249_RS15060 0.30 -0.2 3,047,027 - A4249_RS15060 0.30 +0.2 3,047,027 - A4249_RS15060 0.30 +0.8 3,047,093 - A4249_RS15060 0.35 -0.9 3,047,093 - A4249_RS15060 0.35 +0.5 3,047,093 - A4249_RS15060 0.35 -0.2 3,047,093 - A4249_RS15060 0.35 +0.5 3,047,093 - A4249_RS15060 0.35 -0.3 3,047,143 + A4249_RS15060 0.39 -0.2 3,047,144 - A4249_RS15060 0.39 -1.7 3,047,144 - A4249_RS15060 0.39 -1.0 3,047,188 + A4249_RS15060 0.42 -0.2 3,047,446 + A4249_RS15060 0.62 -1.0 3,047,446 + A4249_RS15060 0.62 +0.0 3,047,446 + A4249_RS15060 0.62 -0.2 3,047,446 + A4249_RS15060 0.62 +0.0 3,047,447 - A4249_RS15060 0.62 -0.9 3,047,512 + A4249_RS15060 0.68 -0.0 3,047,512 + A4249_RS15060 0.68 -0.0 3,047,512 + A4249_RS15060 0.68 -0.3 3,047,512 + A4249_RS15060 0.68 +0.7 3,047,512 + A4249_RS15060 0.68 -0.6 3,047,512 + A4249_RS15060 0.68 +0.7 3,047,512 + A4249_RS15060 0.68 -0.1 3,047,513 - A4249_RS15060 0.68 -0.2 3,047,513 - A4249_RS15060 0.68 -1.2 3,047,513 - A4249_RS15060 0.68 -0.3 3,047,513 - A4249_RS15060 0.68 -0.2 3,047,513 - A4249_RS15060 0.68 -0.2 3,047,513 - A4249_RS15060 0.68 -0.3 3,047,513 - A4249_RS15060 0.68 -0.4 3,047,513 - A4249_RS15060 0.68 -0.8 3,047,566 + A4249_RS15060 0.72 +0.5 3,047,566 + A4249_RS15060 0.72 +0.3 3,047,566 + A4249_RS15060 0.72 +1.1 3,047,567 - A4249_RS15060 0.72 -0.3 3,047,567 - A4249_RS15060 0.72 -0.3 3,047,567 - A4249_RS15060 0.72 -0.1
Or see this region's nucleotide sequence