Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15000

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14995 and A4249_RS15000 overlap by 4 nucleotidesA4249_RS15000 and A4249_RS15005 overlap by 4 nucleotidesA4249_RS15005 and A4249_RS15010 are separated by 203 nucleotides A4249_RS14995: A4249_RS14995 - NAD(P)/FAD-dependent oxidoreductase, at 3,033,681 to 3,035,012 _RS14995 A4249_RS15000: A4249_RS15000 - endonuclease III, at 3,035,009 to 3,035,752 _RS15000 A4249_RS15005: A4249_RS15005 - MarR family transcriptional regulator, at 3,035,749 to 3,036,255 _RS15005 A4249_RS15010: A4249_RS15010 - methyl-accepting chemotaxis protein, at 3,036,459 to 3,037,922 _RS15010 Position (kb) 3035 3036Strain fitness (log2 ratio) -2 -1 0 1 2at 3034.203 kb on + strand, within A4249_RS14995at 3034.203 kb on + strand, within A4249_RS14995at 3034.204 kb on - strand, within A4249_RS14995at 3034.204 kb on - strand, within A4249_RS14995at 3034.213 kb on - strand, within A4249_RS14995at 3034.213 kb on - strand, within A4249_RS14995at 3034.213 kb on - strand, within A4249_RS14995at 3034.251 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.623 kb on + strand, within A4249_RS14995at 3034.623 kb on + strand, within A4249_RS14995at 3034.788 kb on + strand, within A4249_RS14995at 3034.789 kb on - strand, within A4249_RS14995at 3034.887 kb on + strandat 3034.887 kb on + strandat 3034.887 kb on + strandat 3034.888 kb on - strandat 3034.888 kb on - strandat 3034.888 kb on - strandat 3034.890 kb on + strandat 3034.890 kb on + strandat 3034.891 kb on - strandat 3035.130 kb on - strand, within A4249_RS15000at 3035.324 kb on + strand, within A4249_RS15000at 3035.324 kb on + strand, within A4249_RS15000at 3035.324 kb on + strand, within A4249_RS15000at 3035.325 kb on - strand, within A4249_RS15000at 3035.325 kb on - strand, within A4249_RS15000at 3035.654 kb on + strand, within A4249_RS15000at 3035.751 kb on - strandat 3035.751 kb on - strandat 3036.077 kb on + strand, within A4249_RS15005at 3036.077 kb on + strand, within A4249_RS15005at 3036.077 kb on + strand, within A4249_RS15005at 3036.077 kb on + strand, within A4249_RS15005at 3036.077 kb on + strand, within A4249_RS15005at 3036.077 kb on + strand, within A4249_RS15005at 3036.077 kb on + strand, within A4249_RS15005at 3036.078 kb on - strand, within A4249_RS15005at 3036.078 kb on - strand, within A4249_RS15005at 3036.078 kb on - strand, within A4249_RS15005at 3036.078 kb on - strand, within A4249_RS15005at 3036.078 kb on - strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.080 kb on + strand, within A4249_RS15005at 3036.081 kb on - strand, within A4249_RS15005at 3036.081 kb on - strand, within A4249_RS15005at 3036.081 kb on - strand, within A4249_RS15005at 3036.303 kb on - strandat 3036.343 kb on + strandat 3036.344 kb on - strandat 3036.346 kb on + strandat 3036.360 kb on + strandat 3036.360 kb on + strandat 3036.360 kb on + strandat 3036.361 kb on - strandat 3036.361 kb on - strandat 3036.370 kb on + strandat 3036.371 kb on - strandat 3036.371 kb on - strandat 3036.371 kb on - strandat 3036.411 kb on - strandat 3036.416 kb on + strandat 3036.419 kb on + strandat 3036.437 kb on + strandat 3036.437 kb on + strandat 3036.437 kb on + strandat 3036.437 kb on + strandat 3036.438 kb on - strandat 3036.438 kb on - strandat 3036.438 kb on - strandat 3036.443 kb on + strandat 3036.443 kb on + strandat 3036.443 kb on + strandat 3036.444 kb on - strandat 3036.444 kb on - strandat 3036.444 kb on - strandat 3036.444 kb on - strandat 3036.444 kb on - strandat 3036.444 kb on - strandat 3036.555 kb on + strandat 3036.574 kb on + strandat 3036.574 kb on + strandat 3036.575 kb on - strandat 3036.627 kb on + strand, within A4249_RS15010at 3036.687 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.726 kb on + strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010at 3036.727 kb on - strand, within A4249_RS15010

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,034,203 + A4249_RS14995 0.39 -0.4
3,034,203 + A4249_RS14995 0.39 -0.4
3,034,204 - A4249_RS14995 0.39 -0.1
3,034,204 - A4249_RS14995 0.39 -0.9
3,034,213 - A4249_RS14995 0.40 -1.3
3,034,213 - A4249_RS14995 0.40 +2.5
3,034,213 - A4249_RS14995 0.40 +0.2
3,034,251 + A4249_RS14995 0.43 -0.0
3,034,505 + A4249_RS14995 0.62 +0.5
3,034,505 + A4249_RS14995 0.62 +0.4
3,034,505 + A4249_RS14995 0.62 -0.2
3,034,505 + A4249_RS14995 0.62 +0.5
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,505 + A4249_RS14995 0.62 +0.4
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,505 + A4249_RS14995 0.62 +1.5
3,034,505 + A4249_RS14995 0.62 +0.3
3,034,505 + A4249_RS14995 0.62 +0.3
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,506 - A4249_RS14995 0.62 -0.9
3,034,506 - A4249_RS14995 0.62 +0.3
3,034,506 - A4249_RS14995 0.62 +0.9
3,034,506 - A4249_RS14995 0.62 -0.9
3,034,506 - A4249_RS14995 0.62 -0.0
3,034,506 - A4249_RS14995 0.62 -0.3
3,034,506 - A4249_RS14995 0.62 -0.6
3,034,506 - A4249_RS14995 0.62 -0.2
3,034,506 - A4249_RS14995 0.62 +0.4
3,034,506 - A4249_RS14995 0.62 +0.3
3,034,506 - A4249_RS14995 0.62 -0.3
3,034,506 - A4249_RS14995 0.62 -0.1
3,034,506 - A4249_RS14995 0.62 -0.2
3,034,506 - A4249_RS14995 0.62 +0.6
3,034,506 - A4249_RS14995 0.62 -0.2
3,034,623 + A4249_RS14995 0.71 +0.2
3,034,623 + A4249_RS14995 0.71 -0.6
3,034,788 + A4249_RS14995 0.83 -0.5
3,034,789 - A4249_RS14995 0.83 +0.2
3,034,887 + -0.6
3,034,887 + -0.3
3,034,887 + -0.2
3,034,888 - +0.2
3,034,888 - -0.3
3,034,888 - +1.1
3,034,890 + -1.0
3,034,890 + -0.4
3,034,891 - -0.3
3,035,130 - A4249_RS15000 0.16 +0.5
3,035,324 + A4249_RS15000 0.42 +0.4
3,035,324 + A4249_RS15000 0.42 -0.3
3,035,324 + A4249_RS15000 0.42 -0.3
3,035,325 - A4249_RS15000 0.42 +0.1
3,035,325 - A4249_RS15000 0.42 -0.0
3,035,654 + A4249_RS15000 0.87 -0.1
3,035,751 - +1.8
3,035,751 - -0.3
3,036,077 + A4249_RS15005 0.65 +0.8
3,036,077 + A4249_RS15005 0.65 +0.2
3,036,077 + A4249_RS15005 0.65 +0.1
3,036,077 + A4249_RS15005 0.65 +0.2
3,036,077 + A4249_RS15005 0.65 +0.2
3,036,077 + A4249_RS15005 0.65 -0.3
3,036,077 + A4249_RS15005 0.65 +0.3
3,036,078 - A4249_RS15005 0.65 -0.1
3,036,078 - A4249_RS15005 0.65 -0.5
3,036,078 - A4249_RS15005 0.65 -0.1
3,036,078 - A4249_RS15005 0.65 +0.9
3,036,078 - A4249_RS15005 0.65 -0.2
3,036,080 + A4249_RS15005 0.65 -0.0
3,036,080 + A4249_RS15005 0.65 -0.5
3,036,080 + A4249_RS15005 0.65 -0.2
3,036,080 + A4249_RS15005 0.65 +0.7
3,036,080 + A4249_RS15005 0.65 +0.4
3,036,080 + A4249_RS15005 0.65 +1.1
3,036,080 + A4249_RS15005 0.65 -0.5
3,036,080 + A4249_RS15005 0.65 +0.1
3,036,081 - A4249_RS15005 0.65 +0.3
3,036,081 - A4249_RS15005 0.65 -0.6
3,036,081 - A4249_RS15005 0.65 -0.2
3,036,303 - -0.7
3,036,343 + -0.1
3,036,344 - -0.3
3,036,346 + -0.6
3,036,360 + -0.7
3,036,360 + -0.4
3,036,360 + +0.1
3,036,361 - +0.2
3,036,361 - +0.6
3,036,370 + -0.3
3,036,371 - +0.6
3,036,371 - -1.2
3,036,371 - -0.2
3,036,411 - +0.8
3,036,416 + -0.2
3,036,419 + +0.1
3,036,437 + +0.9
3,036,437 + -0.4
3,036,437 + -0.0
3,036,437 + +0.2
3,036,438 - +0.6
3,036,438 - +0.7
3,036,438 - -2.2
3,036,443 + +1.9
3,036,443 + +0.5
3,036,443 + +0.5
3,036,444 - +0.2
3,036,444 - -0.3
3,036,444 - -0.0
3,036,444 - -0.6
3,036,444 - +0.2
3,036,444 - -0.1
3,036,555 + -0.1
3,036,574 + -0.7
3,036,574 + -0.9
3,036,575 - +1.4
3,036,627 + A4249_RS15010 0.11 +0.0
3,036,687 + A4249_RS15010 0.16 -0.1
3,036,726 + A4249_RS15010 0.18 +0.1
3,036,726 + A4249_RS15010 0.18 +0.0
3,036,726 + A4249_RS15010 0.18 -0.2
3,036,726 + A4249_RS15010 0.18 -0.3
3,036,726 + A4249_RS15010 0.18 -0.0
3,036,726 + A4249_RS15010 0.18 +0.3
3,036,726 + A4249_RS15010 0.18 +0.9
3,036,726 + A4249_RS15010 0.18 -0.9
3,036,727 - A4249_RS15010 0.18 -0.0
3,036,727 - A4249_RS15010 0.18 -0.2
3,036,727 - A4249_RS15010 0.18 -0.0
3,036,727 - A4249_RS15010 0.18 -0.0
3,036,727 - A4249_RS15010 0.18 +0.6
3,036,727 - A4249_RS15010 0.18 -0.3
3,036,727 - A4249_RS15010 0.18 +0.2
3,036,727 - A4249_RS15010 0.18 +0.1
3,036,727 - A4249_RS15010 0.18 +0.1

Or see this region's nucleotide sequence