Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14995

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14990 and A4249_RS14995 are separated by 121 nucleotidesA4249_RS14995 and A4249_RS15000 overlap by 4 nucleotidesA4249_RS15000 and A4249_RS15005 overlap by 4 nucleotides A4249_RS14990: A4249_RS14990 - HlyD family secretion protein, at 3,032,474 to 3,033,559 _RS14990 A4249_RS14995: A4249_RS14995 - NAD(P)/FAD-dependent oxidoreductase, at 3,033,681 to 3,035,012 _RS14995 A4249_RS15000: A4249_RS15000 - endonuclease III, at 3,035,009 to 3,035,752 _RS15000 A4249_RS15005: A4249_RS15005 - MarR family transcriptional regulator, at 3,035,749 to 3,036,255 _RS15005 Position (kb) 3033 3034 3035 3036Strain fitness (log2 ratio) -2 -1 0 1 2at 3032.814 kb on + strand, within A4249_RS14990at 3032.814 kb on + strand, within A4249_RS14990at 3032.814 kb on + strand, within A4249_RS14990at 3032.814 kb on + strand, within A4249_RS14990at 3032.814 kb on + strand, within A4249_RS14990at 3032.814 kb on + strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.815 kb on - strand, within A4249_RS14990at 3032.865 kb on + strand, within A4249_RS14990at 3032.865 kb on + strand, within A4249_RS14990at 3032.865 kb on + strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.866 kb on - strand, within A4249_RS14990at 3032.975 kb on + strand, within A4249_RS14990at 3032.975 kb on + strand, within A4249_RS14990at 3032.975 kb on + strand, within A4249_RS14990at 3032.976 kb on - strand, within A4249_RS14990at 3032.976 kb on - strand, within A4249_RS14990at 3032.976 kb on - strand, within A4249_RS14990at 3033.627 kb on + strandat 3033.628 kb on - strandat 3033.667 kb on + strandat 3033.667 kb on + strandat 3033.667 kb on + strandat 3033.667 kb on + strandat 3033.668 kb on - strandat 3033.668 kb on - strandat 3033.668 kb on - strandat 3033.668 kb on - strandat 3034.203 kb on + strand, within A4249_RS14995at 3034.203 kb on + strand, within A4249_RS14995at 3034.204 kb on - strand, within A4249_RS14995at 3034.204 kb on - strand, within A4249_RS14995at 3034.213 kb on - strand, within A4249_RS14995at 3034.213 kb on - strand, within A4249_RS14995at 3034.213 kb on - strand, within A4249_RS14995at 3034.251 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.505 kb on + strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.506 kb on - strand, within A4249_RS14995at 3034.623 kb on + strand, within A4249_RS14995at 3034.623 kb on + strand, within A4249_RS14995at 3034.788 kb on + strand, within A4249_RS14995at 3034.789 kb on - strand, within A4249_RS14995at 3034.887 kb on + strandat 3034.887 kb on + strandat 3034.887 kb on + strandat 3034.888 kb on - strandat 3034.888 kb on - strandat 3034.888 kb on - strandat 3034.890 kb on + strandat 3034.890 kb on + strandat 3034.891 kb on - strandat 3035.130 kb on - strand, within A4249_RS15000at 3035.324 kb on + strand, within A4249_RS15000at 3035.324 kb on + strand, within A4249_RS15000at 3035.324 kb on + strand, within A4249_RS15000at 3035.325 kb on - strand, within A4249_RS15000at 3035.325 kb on - strand, within A4249_RS15000at 3035.654 kb on + strand, within A4249_RS15000at 3035.751 kb on - strandat 3035.751 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,032,814 + A4249_RS14990 0.31 -0.5
3,032,814 + A4249_RS14990 0.31 -1.4
3,032,814 + A4249_RS14990 0.31 +0.3
3,032,814 + A4249_RS14990 0.31 -0.3
3,032,814 + A4249_RS14990 0.31 -0.6
3,032,814 + A4249_RS14990 0.31 +0.3
3,032,815 - A4249_RS14990 0.31 +0.1
3,032,815 - A4249_RS14990 0.31 -0.5
3,032,815 - A4249_RS14990 0.31 -0.2
3,032,815 - A4249_RS14990 0.31 -0.3
3,032,815 - A4249_RS14990 0.31 -0.1
3,032,815 - A4249_RS14990 0.31 -0.6
3,032,815 - A4249_RS14990 0.31 -0.1
3,032,815 - A4249_RS14990 0.31 +0.4
3,032,815 - A4249_RS14990 0.31 +0.5
3,032,815 - A4249_RS14990 0.31 -0.2
3,032,815 - A4249_RS14990 0.31 +0.1
3,032,815 - A4249_RS14990 0.31 +0.4
3,032,815 - A4249_RS14990 0.31 -0.3
3,032,865 + A4249_RS14990 0.36 +0.1
3,032,865 + A4249_RS14990 0.36 -0.0
3,032,865 + A4249_RS14990 0.36 -0.7
3,032,866 - A4249_RS14990 0.36 +0.6
3,032,866 - A4249_RS14990 0.36 +0.5
3,032,866 - A4249_RS14990 0.36 +0.2
3,032,866 - A4249_RS14990 0.36 +0.8
3,032,866 - A4249_RS14990 0.36 -0.1
3,032,866 - A4249_RS14990 0.36 +0.2
3,032,866 - A4249_RS14990 0.36 -0.1
3,032,866 - A4249_RS14990 0.36 -1.8
3,032,975 + A4249_RS14990 0.46 -0.1
3,032,975 + A4249_RS14990 0.46 +0.4
3,032,975 + A4249_RS14990 0.46 -0.1
3,032,976 - A4249_RS14990 0.46 -0.6
3,032,976 - A4249_RS14990 0.46 -0.1
3,032,976 - A4249_RS14990 0.46 +0.9
3,033,627 + +0.1
3,033,628 - -0.2
3,033,667 + +0.3
3,033,667 + +0.2
3,033,667 + +0.7
3,033,667 + +0.3
3,033,668 - +0.2
3,033,668 - +0.4
3,033,668 - -0.6
3,033,668 - +0.4
3,034,203 + A4249_RS14995 0.39 -0.4
3,034,203 + A4249_RS14995 0.39 -0.4
3,034,204 - A4249_RS14995 0.39 -0.1
3,034,204 - A4249_RS14995 0.39 -0.9
3,034,213 - A4249_RS14995 0.40 -1.3
3,034,213 - A4249_RS14995 0.40 +2.5
3,034,213 - A4249_RS14995 0.40 +0.2
3,034,251 + A4249_RS14995 0.43 -0.0
3,034,505 + A4249_RS14995 0.62 +0.5
3,034,505 + A4249_RS14995 0.62 +0.4
3,034,505 + A4249_RS14995 0.62 -0.2
3,034,505 + A4249_RS14995 0.62 +0.5
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,505 + A4249_RS14995 0.62 +0.4
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,505 + A4249_RS14995 0.62 +1.5
3,034,505 + A4249_RS14995 0.62 +0.3
3,034,505 + A4249_RS14995 0.62 +0.3
3,034,505 + A4249_RS14995 0.62 -0.6
3,034,506 - A4249_RS14995 0.62 -0.9
3,034,506 - A4249_RS14995 0.62 +0.3
3,034,506 - A4249_RS14995 0.62 +0.9
3,034,506 - A4249_RS14995 0.62 -0.9
3,034,506 - A4249_RS14995 0.62 -0.0
3,034,506 - A4249_RS14995 0.62 -0.3
3,034,506 - A4249_RS14995 0.62 -0.6
3,034,506 - A4249_RS14995 0.62 -0.2
3,034,506 - A4249_RS14995 0.62 +0.4
3,034,506 - A4249_RS14995 0.62 +0.3
3,034,506 - A4249_RS14995 0.62 -0.3
3,034,506 - A4249_RS14995 0.62 -0.1
3,034,506 - A4249_RS14995 0.62 -0.2
3,034,506 - A4249_RS14995 0.62 +0.6
3,034,506 - A4249_RS14995 0.62 -0.2
3,034,623 + A4249_RS14995 0.71 +0.2
3,034,623 + A4249_RS14995 0.71 -0.6
3,034,788 + A4249_RS14995 0.83 -0.5
3,034,789 - A4249_RS14995 0.83 +0.2
3,034,887 + -0.6
3,034,887 + -0.3
3,034,887 + -0.2
3,034,888 - +0.2
3,034,888 - -0.3
3,034,888 - +1.1
3,034,890 + -1.0
3,034,890 + -0.4
3,034,891 - -0.3
3,035,130 - A4249_RS15000 0.16 +0.5
3,035,324 + A4249_RS15000 0.42 +0.4
3,035,324 + A4249_RS15000 0.42 -0.3
3,035,324 + A4249_RS15000 0.42 -0.3
3,035,325 - A4249_RS15000 0.42 +0.1
3,035,325 - A4249_RS15000 0.42 -0.0
3,035,654 + A4249_RS15000 0.87 -0.1
3,035,751 - +1.8
3,035,751 - -0.3

Or see this region's nucleotide sequence