Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14990 and A4249_RS14995 are separated by 121 nucleotides A4249_RS14995 and A4249_RS15000 overlap by 4 nucleotides A4249_RS15000 and A4249_RS15005 overlap by 4 nucleotides
A4249_RS14990: A4249_RS14990 - HlyD family secretion protein, at 3,032,474 to 3,033,559
_RS14990
A4249_RS14995: A4249_RS14995 - NAD(P)/FAD-dependent oxidoreductase, at 3,033,681 to 3,035,012
_RS14995
A4249_RS15000: A4249_RS15000 - endonuclease III, at 3,035,009 to 3,035,752
_RS15000
A4249_RS15005: A4249_RS15005 - MarR family transcriptional regulator, at 3,035,749 to 3,036,255
_RS15005
Position (kb)
3033
3034
3035
3036 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.865 kb on + strand, within A4249_RS14990 at 3032.865 kb on + strand, within A4249_RS14990 at 3032.865 kb on + strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.975 kb on + strand, within A4249_RS14990 at 3032.975 kb on + strand, within A4249_RS14990 at 3032.975 kb on + strand, within A4249_RS14990 at 3032.976 kb on - strand, within A4249_RS14990 at 3032.976 kb on - strand, within A4249_RS14990 at 3032.976 kb on - strand, within A4249_RS14990 at 3033.627 kb on + strand at 3033.628 kb on - strand at 3033.667 kb on + strand at 3033.667 kb on + strand at 3033.667 kb on + strand at 3033.667 kb on + strand at 3033.668 kb on - strand at 3033.668 kb on - strand at 3033.668 kb on - strand at 3033.668 kb on - strand at 3034.203 kb on + strand, within A4249_RS14995 at 3034.203 kb on + strand, within A4249_RS14995 at 3034.204 kb on - strand, within A4249_RS14995 at 3034.204 kb on - strand, within A4249_RS14995 at 3034.213 kb on - strand, within A4249_RS14995 at 3034.213 kb on - strand, within A4249_RS14995 at 3034.213 kb on - strand, within A4249_RS14995 at 3034.251 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.505 kb on + strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.506 kb on - strand, within A4249_RS14995 at 3034.623 kb on + strand, within A4249_RS14995 at 3034.623 kb on + strand, within A4249_RS14995 at 3034.788 kb on + strand, within A4249_RS14995 at 3034.789 kb on - strand, within A4249_RS14995 at 3034.887 kb on + strand at 3034.887 kb on + strand at 3034.887 kb on + strand at 3034.888 kb on - strand at 3034.888 kb on - strand at 3034.888 kb on - strand at 3034.890 kb on + strand at 3034.890 kb on + strand at 3034.891 kb on - strand at 3035.130 kb on - strand, within A4249_RS15000 at 3035.324 kb on + strand, within A4249_RS15000 at 3035.324 kb on + strand, within A4249_RS15000 at 3035.324 kb on + strand, within A4249_RS15000 at 3035.325 kb on - strand, within A4249_RS15000 at 3035.325 kb on - strand, within A4249_RS15000 at 3035.654 kb on + strand, within A4249_RS15000 at 3035.751 kb on - strand at 3035.751 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,032,814 + A4249_RS14990 0.31 -0.5 3,032,814 + A4249_RS14990 0.31 -1.4 3,032,814 + A4249_RS14990 0.31 +0.3 3,032,814 + A4249_RS14990 0.31 -0.3 3,032,814 + A4249_RS14990 0.31 -0.6 3,032,814 + A4249_RS14990 0.31 +0.3 3,032,815 - A4249_RS14990 0.31 +0.1 3,032,815 - A4249_RS14990 0.31 -0.5 3,032,815 - A4249_RS14990 0.31 -0.2 3,032,815 - A4249_RS14990 0.31 -0.3 3,032,815 - A4249_RS14990 0.31 -0.1 3,032,815 - A4249_RS14990 0.31 -0.6 3,032,815 - A4249_RS14990 0.31 -0.1 3,032,815 - A4249_RS14990 0.31 +0.4 3,032,815 - A4249_RS14990 0.31 +0.5 3,032,815 - A4249_RS14990 0.31 -0.2 3,032,815 - A4249_RS14990 0.31 +0.1 3,032,815 - A4249_RS14990 0.31 +0.4 3,032,815 - A4249_RS14990 0.31 -0.3 3,032,865 + A4249_RS14990 0.36 +0.1 3,032,865 + A4249_RS14990 0.36 -0.0 3,032,865 + A4249_RS14990 0.36 -0.7 3,032,866 - A4249_RS14990 0.36 +0.6 3,032,866 - A4249_RS14990 0.36 +0.5 3,032,866 - A4249_RS14990 0.36 +0.2 3,032,866 - A4249_RS14990 0.36 +0.8 3,032,866 - A4249_RS14990 0.36 -0.1 3,032,866 - A4249_RS14990 0.36 +0.2 3,032,866 - A4249_RS14990 0.36 -0.1 3,032,866 - A4249_RS14990 0.36 -1.8 3,032,975 + A4249_RS14990 0.46 -0.1 3,032,975 + A4249_RS14990 0.46 +0.4 3,032,975 + A4249_RS14990 0.46 -0.1 3,032,976 - A4249_RS14990 0.46 -0.6 3,032,976 - A4249_RS14990 0.46 -0.1 3,032,976 - A4249_RS14990 0.46 +0.9 3,033,627 + +0.1 3,033,628 - -0.2 3,033,667 + +0.3 3,033,667 + +0.2 3,033,667 + +0.7 3,033,667 + +0.3 3,033,668 - +0.2 3,033,668 - +0.4 3,033,668 - -0.6 3,033,668 - +0.4 3,034,203 + A4249_RS14995 0.39 -0.4 3,034,203 + A4249_RS14995 0.39 -0.4 3,034,204 - A4249_RS14995 0.39 -0.1 3,034,204 - A4249_RS14995 0.39 -0.9 3,034,213 - A4249_RS14995 0.40 -1.3 3,034,213 - A4249_RS14995 0.40 +2.5 3,034,213 - A4249_RS14995 0.40 +0.2 3,034,251 + A4249_RS14995 0.43 -0.0 3,034,505 + A4249_RS14995 0.62 +0.5 3,034,505 + A4249_RS14995 0.62 +0.4 3,034,505 + A4249_RS14995 0.62 -0.2 3,034,505 + A4249_RS14995 0.62 +0.5 3,034,505 + A4249_RS14995 0.62 -0.6 3,034,505 + A4249_RS14995 0.62 -0.6 3,034,505 + A4249_RS14995 0.62 +0.4 3,034,505 + A4249_RS14995 0.62 -0.6 3,034,505 + A4249_RS14995 0.62 +1.5 3,034,505 + A4249_RS14995 0.62 +0.3 3,034,505 + A4249_RS14995 0.62 +0.3 3,034,505 + A4249_RS14995 0.62 -0.6 3,034,506 - A4249_RS14995 0.62 -0.9 3,034,506 - A4249_RS14995 0.62 +0.3 3,034,506 - A4249_RS14995 0.62 +0.9 3,034,506 - A4249_RS14995 0.62 -0.9 3,034,506 - A4249_RS14995 0.62 -0.0 3,034,506 - A4249_RS14995 0.62 -0.3 3,034,506 - A4249_RS14995 0.62 -0.6 3,034,506 - A4249_RS14995 0.62 -0.2 3,034,506 - A4249_RS14995 0.62 +0.4 3,034,506 - A4249_RS14995 0.62 +0.3 3,034,506 - A4249_RS14995 0.62 -0.3 3,034,506 - A4249_RS14995 0.62 -0.1 3,034,506 - A4249_RS14995 0.62 -0.2 3,034,506 - A4249_RS14995 0.62 +0.6 3,034,506 - A4249_RS14995 0.62 -0.2 3,034,623 + A4249_RS14995 0.71 +0.2 3,034,623 + A4249_RS14995 0.71 -0.6 3,034,788 + A4249_RS14995 0.83 -0.5 3,034,789 - A4249_RS14995 0.83 +0.2 3,034,887 + -0.6 3,034,887 + -0.3 3,034,887 + -0.2 3,034,888 - +0.2 3,034,888 - -0.3 3,034,888 - +1.1 3,034,890 + -1.0 3,034,890 + -0.4 3,034,891 - -0.3 3,035,130 - A4249_RS15000 0.16 +0.5 3,035,324 + A4249_RS15000 0.42 +0.4 3,035,324 + A4249_RS15000 0.42 -0.3 3,035,324 + A4249_RS15000 0.42 -0.3 3,035,325 - A4249_RS15000 0.42 +0.1 3,035,325 - A4249_RS15000 0.42 -0.0 3,035,654 + A4249_RS15000 0.87 -0.1 3,035,751 - +1.8 3,035,751 - -0.3
Or see this region's nucleotide sequence