Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14760

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14755 and A4249_RS14760 are separated by 52 nucleotidesA4249_RS14760 and A4249_RS14765 are separated by 93 nucleotidesA4249_RS14765 and A4249_RS14770 are separated by 50 nucleotides A4249_RS14755: A4249_RS14755 - GTPase ObgE, at 2,988,325 to 2,989,371 _RS14755 A4249_RS14760: A4249_RS14760 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,989,424 to 2,990,878 _RS14760 A4249_RS14765: A4249_RS14765 - entericidin A/B family lipoprotein, at 2,990,972 to 2,991,109 _RS14765 A4249_RS14770: A4249_RS14770 - sensor histidine kinase, at 2,991,160 to 2,992,854 _RS14770 Position (kb) 2989 2990 2991Strain fitness (log2 ratio) -2 -1 0 1at 2989.381 kb on - strandat 2989.381 kb on - strandat 2989.404 kb on - strandat 2989.404 kb on - strandat 2989.425 kb on + strandat 2989.425 kb on + strandat 2989.426 kb on - strandat 2989.461 kb on + strandat 2989.461 kb on + strandat 2989.461 kb on + strandat 2989.461 kb on + strandat 2989.461 kb on + strandat 2989.461 kb on + strandat 2989.462 kb on - strandat 2989.462 kb on - strandat 2989.462 kb on - strandat 2989.462 kb on - strandat 2989.462 kb on - strandat 2989.462 kb on - strandat 2989.462 kb on - strandat 2989.498 kb on - strandat 2989.567 kb on + strandat 2989.567 kb on + strandat 2989.567 kb on + strandat 2989.567 kb on + strandat 2989.567 kb on + strandat 2989.567 kb on + strandat 2989.568 kb on - strandat 2989.568 kb on - strandat 2989.626 kb on + strand, within A4249_RS14760at 2989.626 kb on + strand, within A4249_RS14760at 2989.626 kb on + strand, within A4249_RS14760at 2989.627 kb on - strand, within A4249_RS14760at 2989.627 kb on - strand, within A4249_RS14760at 2989.627 kb on - strand, within A4249_RS14760at 2989.627 kb on - strand, within A4249_RS14760at 2989.627 kb on - strand, within A4249_RS14760at 2989.627 kb on - strand, within A4249_RS14760at 2989.641 kb on + strand, within A4249_RS14760at 2989.642 kb on - strand, within A4249_RS14760at 2989.959 kb on + strand, within A4249_RS14760at 2989.959 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.986 kb on + strand, within A4249_RS14760at 2989.987 kb on - strand, within A4249_RS14760at 2989.987 kb on - strand, within A4249_RS14760at 2989.987 kb on - strand, within A4249_RS14760at 2989.987 kb on - strand, within A4249_RS14760at 2990.283 kb on + strand, within A4249_RS14760at 2990.283 kb on + strand, within A4249_RS14760at 2990.284 kb on - strand, within A4249_RS14760at 2990.284 kb on - strand, within A4249_RS14760at 2990.445 kb on + strand, within A4249_RS14760at 2990.445 kb on + strand, within A4249_RS14760at 2990.445 kb on + strand, within A4249_RS14760at 2990.538 kb on + strand, within A4249_RS14760at 2990.538 kb on + strand, within A4249_RS14760at 2990.539 kb on - strand, within A4249_RS14760at 2990.890 kb on + strandat 2990.891 kb on - strandat 2990.891 kb on - strandat 2990.973 kb on + strandat 2990.974 kb on - strandat 2990.974 kb on - strandat 2990.974 kb on - strandat 2990.974 kb on - strandat 2991.109 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,989,381 - +1.3
2,989,381 - +0.5
2,989,404 - +0.7
2,989,404 - +0.4
2,989,425 + -0.3
2,989,425 + +0.7
2,989,426 - -0.7
2,989,461 + +0.4
2,989,461 + +0.2
2,989,461 + -0.3
2,989,461 + -2.0
2,989,461 + +0.4
2,989,461 + +1.0
2,989,462 - -0.1
2,989,462 - +0.2
2,989,462 - +0.3
2,989,462 - -0.3
2,989,462 - -1.4
2,989,462 - -0.0
2,989,462 - +0.2
2,989,498 - +0.1
2,989,567 + -0.3
2,989,567 + -0.1
2,989,567 + -1.0
2,989,567 + +0.1
2,989,567 + +0.1
2,989,567 + +0.5
2,989,568 - +0.0
2,989,568 - -0.2
2,989,626 + A4249_RS14760 0.14 -0.1
2,989,626 + A4249_RS14760 0.14 +0.2
2,989,626 + A4249_RS14760 0.14 -0.7
2,989,627 - A4249_RS14760 0.14 -2.1
2,989,627 - A4249_RS14760 0.14 -0.5
2,989,627 - A4249_RS14760 0.14 +1.7
2,989,627 - A4249_RS14760 0.14 -0.4
2,989,627 - A4249_RS14760 0.14 +0.1
2,989,627 - A4249_RS14760 0.14 +0.5
2,989,641 + A4249_RS14760 0.15 -1.7
2,989,642 - A4249_RS14760 0.15 +0.7
2,989,959 + A4249_RS14760 0.37 -0.6
2,989,959 + A4249_RS14760 0.37 +0.1
2,989,986 + A4249_RS14760 0.39 +0.2
2,989,986 + A4249_RS14760 0.39 -0.7
2,989,986 + A4249_RS14760 0.39 +0.6
2,989,986 + A4249_RS14760 0.39 -0.6
2,989,986 + A4249_RS14760 0.39 -0.5
2,989,986 + A4249_RS14760 0.39 -0.3
2,989,986 + A4249_RS14760 0.39 -0.7
2,989,986 + A4249_RS14760 0.39 +0.1
2,989,986 + A4249_RS14760 0.39 -0.0
2,989,987 - A4249_RS14760 0.39 -0.0
2,989,987 - A4249_RS14760 0.39 +0.2
2,989,987 - A4249_RS14760 0.39 +0.4
2,989,987 - A4249_RS14760 0.39 +0.4
2,990,283 + A4249_RS14760 0.59 -0.7
2,990,283 + A4249_RS14760 0.59 +0.3
2,990,284 - A4249_RS14760 0.59 +0.0
2,990,284 - A4249_RS14760 0.59 -1.0
2,990,445 + A4249_RS14760 0.70 -0.3
2,990,445 + A4249_RS14760 0.70 -1.9
2,990,445 + A4249_RS14760 0.70 +0.4
2,990,538 + A4249_RS14760 0.77 -0.3
2,990,538 + A4249_RS14760 0.77 -0.6
2,990,539 - A4249_RS14760 0.77 +0.1
2,990,890 + +0.7
2,990,891 - -0.1
2,990,891 - -0.5
2,990,973 + +0.1
2,990,974 - +0.0
2,990,974 - +0.2
2,990,974 - -1.1
2,990,974 - +0.2
2,991,109 + -0.1

Or see this region's nucleotide sequence