Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14605

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14600 and A4249_RS14605 are separated by 216 nucleotidesA4249_RS14605 and A4249_RS14610 are separated by 76 nucleotides A4249_RS14600: A4249_RS14600 - chaperonin GroEL, at 2,956,976 to 2,958,622 _RS14600 A4249_RS14605: A4249_RS14605 - glycosyltransferase family 2 protein, at 2,958,839 to 2,959,567 _RS14605 A4249_RS14610: A4249_RS14610 - glycosyltransferase family 39 protein, at 2,959,644 to 2,961,332 _RS14610 Position (kb) 2958 2959 2960Strain fitness (log2 ratio) -1 0 1at 2958.621 kb on - strandat 2958.621 kb on - strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.695 kb on - strandat 2958.695 kb on - strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.939 kb on + strand, within A4249_RS14605at 2958.939 kb on + strand, within A4249_RS14605at 2958.940 kb on - strand, within A4249_RS14605at 2958.940 kb on - strand, within A4249_RS14605at 2958.940 kb on - strand, within A4249_RS14605at 2958.984 kb on + strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2959.047 kb on + strand, within A4249_RS14605at 2959.047 kb on + strand, within A4249_RS14605at 2959.047 kb on + strand, within A4249_RS14605at 2959.048 kb on - strand, within A4249_RS14605at 2959.458 kb on + strand, within A4249_RS14605at 2959.459 kb on - strand, within A4249_RS14605at 2959.459 kb on - strand, within A4249_RS14605at 2959.578 kb on + strandat 2959.578 kb on + strandat 2959.579 kb on - strandat 2959.579 kb on - strandat 2959.579 kb on - strandat 2959.620 kb on + strandat 2959.621 kb on - strandat 2959.621 kb on - strandat 2959.632 kb on - strandat 2959.632 kb on - strandat 2959.632 kb on - strandat 2959.632 kb on - strandat 2959.632 kb on - strandat 2959.812 kb on + strandat 2959.812 kb on + strandat 2959.812 kb on + strandat 2959.812 kb on + strandat 2959.812 kb on + strandat 2959.813 kb on - strand, within A4249_RS14610at 2959.813 kb on - strand, within A4249_RS14610at 2959.813 kb on - strand, within A4249_RS14610at 2959.866 kb on + strand, within A4249_RS14610at 2959.866 kb on + strand, within A4249_RS14610at 2959.866 kb on + strand, within A4249_RS14610at 2959.866 kb on + strand, within A4249_RS14610at 2959.866 kb on + strand, within A4249_RS14610at 2959.866 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.136 kb on + strand, within A4249_RS14610at 2960.177 kb on + strand, within A4249_RS14610at 2960.298 kb on + strand, within A4249_RS14610at 2960.298 kb on + strand, within A4249_RS14610at 2960.298 kb on + strand, within A4249_RS14610at 2960.298 kb on + strand, within A4249_RS14610at 2960.298 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610at 2960.469 kb on + strand, within A4249_RS14610

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,958,621 - +0.3
2,958,621 - +0.7
2,958,694 + +0.2
2,958,694 + +0.2
2,958,694 + -0.3
2,958,694 + +0.1
2,958,694 + -0.2
2,958,695 - +0.0
2,958,695 - -0.4
2,958,840 + -0.1
2,958,840 + -0.5
2,958,840 + -0.1
2,958,840 + -0.6
2,958,840 + -0.3
2,958,841 - -0.2
2,958,841 - -0.0
2,958,841 - +0.1
2,958,841 - -0.2
2,958,841 - -0.1
2,958,841 - -0.3
2,958,841 - +0.1
2,958,939 + A4249_RS14605 0.14 +1.1
2,958,939 + A4249_RS14605 0.14 -0.2
2,958,940 - A4249_RS14605 0.14 +0.1
2,958,940 - A4249_RS14605 0.14 -0.2
2,958,940 - A4249_RS14605 0.14 -0.1
2,958,984 + A4249_RS14605 0.20 +0.3
2,958,985 - A4249_RS14605 0.20 -0.1
2,958,985 - A4249_RS14605 0.20 +0.4
2,958,985 - A4249_RS14605 0.20 -0.3
2,958,985 - A4249_RS14605 0.20 +0.1
2,959,047 + A4249_RS14605 0.29 +0.1
2,959,047 + A4249_RS14605 0.29 +0.3
2,959,047 + A4249_RS14605 0.29 -0.3
2,959,048 - A4249_RS14605 0.29 -0.6
2,959,458 + A4249_RS14605 0.85 +0.4
2,959,459 - A4249_RS14605 0.85 -1.3
2,959,459 - A4249_RS14605 0.85 -0.5
2,959,578 + +0.1
2,959,578 + -0.1
2,959,579 - -0.5
2,959,579 - -0.5
2,959,579 - -0.9
2,959,620 + -0.9
2,959,621 - -1.1
2,959,621 - +0.8
2,959,632 - -0.3
2,959,632 - -0.0
2,959,632 - -0.3
2,959,632 - +0.6
2,959,632 - -0.2
2,959,812 + +0.5
2,959,812 + -0.4
2,959,812 + +0.3
2,959,812 + -0.3
2,959,812 + -0.3
2,959,813 - A4249_RS14610 0.10 -0.2
2,959,813 - A4249_RS14610 0.10 -0.4
2,959,813 - A4249_RS14610 0.10 +0.6
2,959,866 + A4249_RS14610 0.13 +0.1
2,959,866 + A4249_RS14610 0.13 +0.7
2,959,866 + A4249_RS14610 0.13 -0.3
2,959,866 + A4249_RS14610 0.13 -1.5
2,959,866 + A4249_RS14610 0.13 -0.2
2,959,866 + A4249_RS14610 0.13 -0.9
2,960,136 + A4249_RS14610 0.29 +1.2
2,960,136 + A4249_RS14610 0.29 +0.1
2,960,136 + A4249_RS14610 0.29 -0.2
2,960,136 + A4249_RS14610 0.29 -0.2
2,960,136 + A4249_RS14610 0.29 +0.4
2,960,136 + A4249_RS14610 0.29 +0.3
2,960,136 + A4249_RS14610 0.29 -0.1
2,960,136 + A4249_RS14610 0.29 -0.7
2,960,136 + A4249_RS14610 0.29 -0.2
2,960,136 + A4249_RS14610 0.29 +0.2
2,960,136 + A4249_RS14610 0.29 +0.5
2,960,136 + A4249_RS14610 0.29 -0.4
2,960,136 + A4249_RS14610 0.29 +0.2
2,960,136 + A4249_RS14610 0.29 -0.6
2,960,136 + A4249_RS14610 0.29 -0.1
2,960,136 + A4249_RS14610 0.29 +0.0
2,960,136 + A4249_RS14610 0.29 +0.4
2,960,136 + A4249_RS14610 0.29 -0.7
2,960,136 + A4249_RS14610 0.29 +0.5
2,960,136 + A4249_RS14610 0.29 -0.1
2,960,136 + A4249_RS14610 0.29 -0.2
2,960,136 + A4249_RS14610 0.29 -0.0
2,960,136 + A4249_RS14610 0.29 -0.2
2,960,177 + A4249_RS14610 0.32 -0.3
2,960,298 + A4249_RS14610 0.39 +0.1
2,960,298 + A4249_RS14610 0.39 -0.0
2,960,298 + A4249_RS14610 0.39 -0.8
2,960,298 + A4249_RS14610 0.39 -0.3
2,960,298 + A4249_RS14610 0.39 -0.2
2,960,469 + A4249_RS14610 0.49 -0.5
2,960,469 + A4249_RS14610 0.49 +0.2
2,960,469 + A4249_RS14610 0.49 -0.4
2,960,469 + A4249_RS14610 0.49 +0.5
2,960,469 + A4249_RS14610 0.49 -0.2
2,960,469 + A4249_RS14610 0.49 +0.1
2,960,469 + A4249_RS14610 0.49 -0.4
2,960,469 + A4249_RS14610 0.49 -0.0
2,960,469 + A4249_RS14610 0.49 -0.3
2,960,469 + A4249_RS14610 0.49 +0.0
2,960,469 + A4249_RS14610 0.49 -0.4
2,960,469 + A4249_RS14610 0.49 -0.2

Or see this region's nucleotide sequence