Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14595

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14585 and A4249_RS14590 are separated by 59 nucleotidesA4249_RS14590 and A4249_RS14595 are separated by 298 nucleotidesA4249_RS14595 and A4249_RS14600 are separated by 53 nucleotides A4249_RS14585: A4249_RS14585 - glucose-6-phosphate isomerase, at 2,954,235 to 2,955,854 _RS14585 A4249_RS14590: A4249_RS14590 - hypothetical protein, at 2,955,914 to 2,956,336 _RS14590 A4249_RS14595: A4249_RS14595 - co-chaperone GroES, at 2,956,635 to 2,956,922 _RS14595 A4249_RS14600: A4249_RS14600 - chaperonin GroEL, at 2,956,976 to 2,958,622 _RS14600 Position (kb) 2956 2957Strain fitness (log2 ratio) -2 -1 0 1at 2955.678 kb on + strand, within A4249_RS14585at 2955.678 kb on + strand, within A4249_RS14585at 2955.678 kb on + strand, within A4249_RS14585at 2955.678 kb on + strand, within A4249_RS14585at 2955.678 kb on + strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.679 kb on - strand, within A4249_RS14585at 2955.899 kb on + strandat 2955.899 kb on + strandat 2955.899 kb on + strandat 2955.899 kb on + strandat 2955.899 kb on + strandat 2955.899 kb on + strandat 2955.900 kb on - strandat 2955.900 kb on - strandat 2955.900 kb on - strandat 2955.915 kb on + strandat 2955.916 kb on - strandat 2955.936 kb on + strandat 2955.937 kb on - strandat 2955.969 kb on + strand, within A4249_RS14590at 2955.981 kb on + strand, within A4249_RS14590at 2956.065 kb on + strand, within A4249_RS14590at 2956.084 kb on - strand, within A4249_RS14590at 2956.086 kb on + strand, within A4249_RS14590at 2956.086 kb on + strand, within A4249_RS14590at 2956.087 kb on - strand, within A4249_RS14590at 2956.087 kb on - strand, within A4249_RS14590at 2956.087 kb on - strand, within A4249_RS14590at 2956.156 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.159 kb on - strand, within A4249_RS14590at 2956.159 kb on - strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.407 kb on - strandat 2956.407 kb on - strandat 2956.407 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,955,678 + A4249_RS14585 0.89 -1.4
2,955,678 + A4249_RS14585 0.89 -0.4
2,955,678 + A4249_RS14585 0.89 +0.5
2,955,678 + A4249_RS14585 0.89 +1.1
2,955,678 + A4249_RS14585 0.89 -1.2
2,955,679 - A4249_RS14585 0.89 +0.6
2,955,679 - A4249_RS14585 0.89 +0.6
2,955,679 - A4249_RS14585 0.89 -0.6
2,955,679 - A4249_RS14585 0.89 -0.0
2,955,679 - A4249_RS14585 0.89 +0.5
2,955,679 - A4249_RS14585 0.89 +0.1
2,955,679 - A4249_RS14585 0.89 -0.1
2,955,899 + +0.2
2,955,899 + -0.9
2,955,899 + -2.0
2,955,899 + -0.2
2,955,899 + +0.2
2,955,899 + -0.4
2,955,900 - +0.3
2,955,900 - -0.2
2,955,900 - -0.0
2,955,915 + -0.4
2,955,916 - -0.9
2,955,936 + +0.6
2,955,937 - +0.4
2,955,969 + A4249_RS14590 0.13 +0.8
2,955,981 + A4249_RS14590 0.16 -0.1
2,956,065 + A4249_RS14590 0.36 -0.0
2,956,084 - A4249_RS14590 0.40 +0.4
2,956,086 + A4249_RS14590 0.41 +0.0
2,956,086 + A4249_RS14590 0.41 +0.1
2,956,087 - A4249_RS14590 0.41 +0.1
2,956,087 - A4249_RS14590 0.41 +0.3
2,956,087 - A4249_RS14590 0.41 +0.5
2,956,156 + A4249_RS14590 0.57 -0.5
2,956,158 + A4249_RS14590 0.58 -0.1
2,956,158 + A4249_RS14590 0.58 -1.9
2,956,158 + A4249_RS14590 0.58 -0.4
2,956,158 + A4249_RS14590 0.58 +0.3
2,956,158 + A4249_RS14590 0.58 -1.5
2,956,158 + A4249_RS14590 0.58 -1.0
2,956,158 + A4249_RS14590 0.58 -1.4
2,956,159 - A4249_RS14590 0.58 +0.3
2,956,159 - A4249_RS14590 0.58 +0.1
2,956,179 + A4249_RS14590 0.63 +0.4
2,956,179 + A4249_RS14590 0.63 -0.8
2,956,179 + A4249_RS14590 0.63 +0.1
2,956,179 + A4249_RS14590 0.63 +0.4
2,956,179 + A4249_RS14590 0.63 +0.7
2,956,179 + A4249_RS14590 0.63 -0.3
2,956,179 + A4249_RS14590 0.63 -0.2
2,956,179 + A4249_RS14590 0.63 -0.5
2,956,180 - A4249_RS14590 0.63 -0.2
2,956,180 - A4249_RS14590 0.63 -0.0
2,956,180 - A4249_RS14590 0.63 -0.5
2,956,180 - A4249_RS14590 0.63 -0.1
2,956,180 - A4249_RS14590 0.63 +0.5
2,956,180 - A4249_RS14590 0.63 +0.7
2,956,180 - A4249_RS14590 0.63 +0.2
2,956,180 - A4249_RS14590 0.63 +1.4
2,956,180 - A4249_RS14590 0.63 +0.4
2,956,407 - -0.1
2,956,407 - -0.8
2,956,407 - -0.0

Or see this region's nucleotide sequence