Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14500

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14495 and A4249_RS14500 are separated by 185 nucleotidesA4249_RS14500 and A4249_RS14505 are separated by 122 nucleotides A4249_RS14495: A4249_RS14495 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 2,933,765 to 2,934,580 _RS14495 A4249_RS14500: A4249_RS14500 - oligopeptide transporter, OPT family, at 2,934,766 to 2,936,817 _RS14500 A4249_RS14505: A4249_RS14505 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 2,936,940 to 2,937,818 _RS14505 Position (kb) 2934 2935 2936 2937Strain fitness (log2 ratio) -1 0 1 2at 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.767 kb on + strandat 2934.767 kb on + strandat 2934.768 kb on - strandat 2934.800 kb on + strandat 2934.800 kb on + strandat 2934.800 kb on + strandat 2934.800 kb on + strandat 2934.800 kb on + strandat 2934.801 kb on - strandat 2934.801 kb on - strandat 2934.801 kb on - strandat 2935.025 kb on + strand, within A4249_RS14500at 2935.025 kb on + strand, within A4249_RS14500at 2935.026 kb on - strand, within A4249_RS14500at 2935.026 kb on - strand, within A4249_RS14500at 2935.026 kb on - strand, within A4249_RS14500at 2935.026 kb on - strand, within A4249_RS14500at 2935.082 kb on + strand, within A4249_RS14500at 2935.082 kb on + strand, within A4249_RS14500at 2935.082 kb on + strand, within A4249_RS14500at 2935.082 kb on + strand, within A4249_RS14500at 2935.082 kb on + strand, within A4249_RS14500at 2935.082 kb on + strand, within A4249_RS14500at 2935.083 kb on - strand, within A4249_RS14500at 2935.083 kb on - strand, within A4249_RS14500at 2935.083 kb on - strand, within A4249_RS14500at 2935.083 kb on - strand, within A4249_RS14500at 2935.116 kb on + strand, within A4249_RS14500at 2935.116 kb on + strand, within A4249_RS14500at 2935.117 kb on - strand, within A4249_RS14500at 2935.632 kb on + strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.633 kb on - strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.634 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.676 kb on + strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2935.677 kb on - strand, within A4249_RS14500at 2936.279 kb on + strand, within A4249_RS14500at 2936.280 kb on - strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.610 kb on + strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.611 kb on - strand, within A4249_RS14500at 2936.714 kb on + strandat 2936.714 kb on + strandat 2936.714 kb on + strandat 2936.714 kb on + strandat 2936.714 kb on + strandat 2936.714 kb on + strandat 2936.714 kb on + strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.715 kb on - strandat 2936.782 kb on + strandat 2936.783 kb on - strandat 2936.817 kb on + strandat 2936.817 kb on + strandat 2936.818 kb on - strandat 2936.818 kb on - strandat 2936.818 kb on - strandat 2936.818 kb on - strandat 2936.846 kb on + strandat 2936.846 kb on + strandat 2936.846 kb on + strandat 2936.846 kb on + strandat 2936.847 kb on - strandat 2936.847 kb on - strandat 2936.847 kb on - strandat 2936.928 kb on + strandat 2936.929 kb on - strandat 2937.098 kb on - strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.593 kb on + strand, within A4249_RS14505at 2937.593 kb on + strand, within A4249_RS14505at 2937.594 kb on - strand, within A4249_RS14505at 2937.669 kb on + strand, within A4249_RS14505at 2937.669 kb on + strand, within A4249_RS14505at 2937.670 kb on - strand, within A4249_RS14505at 2937.693 kb on + strand, within A4249_RS14505at 2937.694 kb on - strand, within A4249_RS14505at 2937.694 kb on - strand, within A4249_RS14505at 2937.694 kb on - strand, within A4249_RS14505at 2937.792 kb on + strandat 2937.792 kb on + strandat 2937.792 kb on + strandat 2937.792 kb on + strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,934,666 + +0.4
2,934,666 + -0.3
2,934,666 + +0.1
2,934,666 + -0.4
2,934,666 + +0.6
2,934,666 + +0.0
2,934,666 + +0.5
2,934,666 + +0.2
2,934,667 - +0.3
2,934,667 - +0.3
2,934,667 - +0.7
2,934,667 - -1.1
2,934,667 - -1.1
2,934,667 - -0.8
2,934,667 - -0.1
2,934,667 - +0.2
2,934,667 - +0.6
2,934,767 + -0.1
2,934,767 + -0.4
2,934,768 - -0.0
2,934,800 + +0.0
2,934,800 + -0.2
2,934,800 + -0.0
2,934,800 + +0.1
2,934,800 + -0.7
2,934,801 - +0.2
2,934,801 - +0.3
2,934,801 - +0.0
2,935,025 + A4249_RS14500 0.13 -0.5
2,935,025 + A4249_RS14500 0.13 -0.2
2,935,026 - A4249_RS14500 0.13 -0.5
2,935,026 - A4249_RS14500 0.13 +0.1
2,935,026 - A4249_RS14500 0.13 +0.3
2,935,026 - A4249_RS14500 0.13 -0.2
2,935,082 + A4249_RS14500 0.15 +0.2
2,935,082 + A4249_RS14500 0.15 +0.6
2,935,082 + A4249_RS14500 0.15 +0.5
2,935,082 + A4249_RS14500 0.15 +0.3
2,935,082 + A4249_RS14500 0.15 +0.0
2,935,082 + A4249_RS14500 0.15 +0.1
2,935,083 - A4249_RS14500 0.15 -0.2
2,935,083 - A4249_RS14500 0.15 +0.2
2,935,083 - A4249_RS14500 0.15 -0.8
2,935,083 - A4249_RS14500 0.15 +0.0
2,935,116 + A4249_RS14500 0.17 -0.2
2,935,116 + A4249_RS14500 0.17 -0.0
2,935,117 - A4249_RS14500 0.17 -0.1
2,935,632 + A4249_RS14500 0.42 +0.3
2,935,633 - A4249_RS14500 0.42 +0.2
2,935,633 - A4249_RS14500 0.42 -0.1
2,935,633 - A4249_RS14500 0.42 +0.4
2,935,633 - A4249_RS14500 0.42 -0.2
2,935,633 - A4249_RS14500 0.42 +0.2
2,935,633 - A4249_RS14500 0.42 -0.3
2,935,633 - A4249_RS14500 0.42 -0.5
2,935,633 - A4249_RS14500 0.42 -0.6
2,935,633 - A4249_RS14500 0.42 -0.1
2,935,634 + A4249_RS14500 0.42 +0.1
2,935,634 + A4249_RS14500 0.42 +0.2
2,935,634 + A4249_RS14500 0.42 +0.7
2,935,634 + A4249_RS14500 0.42 -0.5
2,935,634 + A4249_RS14500 0.42 -0.0
2,935,634 + A4249_RS14500 0.42 -0.1
2,935,634 + A4249_RS14500 0.42 +0.9
2,935,634 + A4249_RS14500 0.42 +0.6
2,935,676 + A4249_RS14500 0.44 -0.6
2,935,676 + A4249_RS14500 0.44 -0.1
2,935,676 + A4249_RS14500 0.44 -0.5
2,935,676 + A4249_RS14500 0.44 -0.4
2,935,676 + A4249_RS14500 0.44 -0.0
2,935,676 + A4249_RS14500 0.44 +0.0
2,935,676 + A4249_RS14500 0.44 -0.0
2,935,676 + A4249_RS14500 0.44 -0.2
2,935,677 - A4249_RS14500 0.44 -0.2
2,935,677 - A4249_RS14500 0.44 -0.1
2,935,677 - A4249_RS14500 0.44 +0.1
2,935,677 - A4249_RS14500 0.44 +0.5
2,935,677 - A4249_RS14500 0.44 +0.0
2,935,677 - A4249_RS14500 0.44 +0.0
2,935,677 - A4249_RS14500 0.44 +0.0
2,935,677 - A4249_RS14500 0.44 +0.0
2,936,279 + A4249_RS14500 0.74 +0.2
2,936,280 - A4249_RS14500 0.74 -0.1
2,936,610 + A4249_RS14500 0.90 +0.4
2,936,610 + A4249_RS14500 0.90 -0.4
2,936,610 + A4249_RS14500 0.90 +0.0
2,936,610 + A4249_RS14500 0.90 -0.6
2,936,610 + A4249_RS14500 0.90 +0.3
2,936,610 + A4249_RS14500 0.90 +0.2
2,936,610 + A4249_RS14500 0.90 -0.1
2,936,611 - A4249_RS14500 0.90 -0.5
2,936,611 - A4249_RS14500 0.90 -0.2
2,936,611 - A4249_RS14500 0.90 +0.2
2,936,611 - A4249_RS14500 0.90 +0.9
2,936,611 - A4249_RS14500 0.90 -0.5
2,936,611 - A4249_RS14500 0.90 +0.1
2,936,611 - A4249_RS14500 0.90 +0.5
2,936,611 - A4249_RS14500 0.90 -0.4
2,936,611 - A4249_RS14500 0.90 -1.6
2,936,611 - A4249_RS14500 0.90 +1.0
2,936,611 - A4249_RS14500 0.90 -0.3
2,936,611 - A4249_RS14500 0.90 -0.4
2,936,714 + -0.0
2,936,714 + +0.1
2,936,714 + +0.1
2,936,714 + -0.4
2,936,714 + +0.3
2,936,714 + +0.3
2,936,714 + -0.1
2,936,715 - -0.2
2,936,715 - +0.5
2,936,715 - -0.2
2,936,715 - -0.3
2,936,715 - -0.2
2,936,715 - +0.5
2,936,715 - -0.1
2,936,715 - +0.0
2,936,715 - -0.3
2,936,782 + -1.1
2,936,783 - +0.7
2,936,817 + +0.0
2,936,817 + -1.4
2,936,818 - -0.1
2,936,818 - -0.0
2,936,818 - -0.3
2,936,818 - +0.4
2,936,846 + +0.1
2,936,846 + +0.1
2,936,846 + -0.3
2,936,846 + -0.8
2,936,847 - -0.5
2,936,847 - -0.1
2,936,847 - +0.1
2,936,928 + -1.5
2,936,929 - +0.7
2,937,098 - A4249_RS14505 0.18 -0.2
2,937,114 + A4249_RS14505 0.20 -0.1
2,937,114 + A4249_RS14505 0.20 -0.5
2,937,114 + A4249_RS14505 0.20 +0.1
2,937,114 + A4249_RS14505 0.20 -0.7
2,937,114 + A4249_RS14505 0.20 +0.0
2,937,114 + A4249_RS14505 0.20 -0.5
2,937,115 - A4249_RS14505 0.20 -0.2
2,937,115 - A4249_RS14505 0.20 -1.3
2,937,115 - A4249_RS14505 0.20 +0.8
2,937,115 - A4249_RS14505 0.20 -0.1
2,937,491 + A4249_RS14505 0.63 -0.3
2,937,491 + A4249_RS14505 0.63 -0.3
2,937,491 + A4249_RS14505 0.63 +1.3
2,937,491 + A4249_RS14505 0.63 +0.2
2,937,491 + A4249_RS14505 0.63 -0.8
2,937,491 + A4249_RS14505 0.63 +0.1
2,937,491 + A4249_RS14505 0.63 +0.0
2,937,491 + A4249_RS14505 0.63 +0.1
2,937,491 + A4249_RS14505 0.63 +0.7
2,937,491 + A4249_RS14505 0.63 +0.1
2,937,491 + A4249_RS14505 0.63 +0.7
2,937,491 + A4249_RS14505 0.63 +0.1
2,937,491 + A4249_RS14505 0.63 -0.1
2,937,492 - A4249_RS14505 0.63 +1.5
2,937,492 - A4249_RS14505 0.63 +2.4
2,937,492 - A4249_RS14505 0.63 +0.2
2,937,492 - A4249_RS14505 0.63 +0.8
2,937,492 - A4249_RS14505 0.63 +0.2
2,937,492 - A4249_RS14505 0.63 +0.1
2,937,492 - A4249_RS14505 0.63 -0.6
2,937,492 - A4249_RS14505 0.63 -1.5
2,937,492 - A4249_RS14505 0.63 -0.1
2,937,492 - A4249_RS14505 0.63 +1.0
2,937,492 - A4249_RS14505 0.63 -0.3
2,937,492 - A4249_RS14505 0.63 +0.2
2,937,495 + A4249_RS14505 0.63 +0.5
2,937,495 + A4249_RS14505 0.63 +0.3
2,937,495 + A4249_RS14505 0.63 -1.5
2,937,495 + A4249_RS14505 0.63 -0.1
2,937,495 + A4249_RS14505 0.63 -0.1
2,937,495 + A4249_RS14505 0.63 -0.3
2,937,495 + A4249_RS14505 0.63 +0.2
2,937,495 + A4249_RS14505 0.63 +0.3
2,937,495 + A4249_RS14505 0.63 -0.6
2,937,495 + A4249_RS14505 0.63 -0.2
2,937,495 + A4249_RS14505 0.63 +0.5
2,937,495 + A4249_RS14505 0.63 +0.2
2,937,496 - A4249_RS14505 0.63 -0.2
2,937,496 - A4249_RS14505 0.63 +0.1
2,937,496 - A4249_RS14505 0.63 +1.7
2,937,496 - A4249_RS14505 0.63 -0.8
2,937,496 - A4249_RS14505 0.63 +0.1
2,937,496 - A4249_RS14505 0.63 +0.1
2,937,496 - A4249_RS14505 0.63 -1.2
2,937,496 - A4249_RS14505 0.63 +0.4
2,937,496 - A4249_RS14505 0.63 +0.1
2,937,496 - A4249_RS14505 0.63 -1.0
2,937,496 - A4249_RS14505 0.63 -0.0
2,937,496 - A4249_RS14505 0.63 -0.3
2,937,496 - A4249_RS14505 0.63 -0.6
2,937,496 - A4249_RS14505 0.63 -1.7
2,937,593 + A4249_RS14505 0.74 +0.5
2,937,593 + A4249_RS14505 0.74 +0.0
2,937,594 - A4249_RS14505 0.74 -0.3
2,937,669 + A4249_RS14505 0.83 +1.7
2,937,669 + A4249_RS14505 0.83 -0.1
2,937,670 - A4249_RS14505 0.83 +0.1
2,937,693 + A4249_RS14505 0.86 +0.4
2,937,694 - A4249_RS14505 0.86 +0.9
2,937,694 - A4249_RS14505 0.86 -0.3
2,937,694 - A4249_RS14505 0.86 -0.4
2,937,792 + +0.7
2,937,792 + -0.2
2,937,792 + +0.2
2,937,792 + +1.5
2,937,793 - +1.2
2,937,793 - -0.1
2,937,793 - +0.2
2,937,793 - -0.3
2,937,793 - -0.4
2,937,793 - +0.2

Or see this region's nucleotide sequence