Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13635

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13625 and A4249_RS13630 overlap by 38 nucleotidesA4249_RS13630 and A4249_RS13635 are separated by 290 nucleotidesA4249_RS13635 and A4249_RS13640 are separated by 175 nucleotides A4249_RS13625: A4249_RS13625 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 2,753,664 to 2,754,302 _RS13625 A4249_RS13630: A4249_RS13630 - hypothetical protein, at 2,754,265 to 2,754,633 _RS13630 A4249_RS13635: A4249_RS13635 - molecular chaperone DnaK, at 2,754,924 to 2,756,831 _RS13635 A4249_RS13640: A4249_RS13640 - molecular chaperone DnaJ, at 2,757,007 to 2,758,209 _RS13640 Position (kb) 2754 2755 2756 2757Strain fitness (log2 ratio) -2 -1 0 1 2at 2753.941 kb on + strand, within A4249_RS13625at 2753.941 kb on + strand, within A4249_RS13625at 2754.061 kb on + strand, within A4249_RS13625at 2754.061 kb on + strand, within A4249_RS13625at 2754.062 kb on - strand, within A4249_RS13625at 2754.154 kb on + strand, within A4249_RS13625at 2754.273 kb on + strandat 2754.274 kb on - strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.275 kb on + strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.276 kb on - strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.281 kb on + strandat 2754.282 kb on - strandat 2754.282 kb on - strandat 2754.356 kb on + strand, within A4249_RS13630at 2754.356 kb on + strand, within A4249_RS13630at 2754.357 kb on - strand, within A4249_RS13630at 2754.357 kb on - strand, within A4249_RS13630at 2754.357 kb on - strand, within A4249_RS13630at 2754.357 kb on - strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.360 kb on + strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.361 kb on - strand, within A4249_RS13630at 2754.470 kb on + strand, within A4249_RS13630at 2754.470 kb on + strand, within A4249_RS13630at 2754.471 kb on - strand, within A4249_RS13630at 2754.524 kb on + strand, within A4249_RS13630at 2754.524 kb on + strand, within A4249_RS13630at 2754.524 kb on + strand, within A4249_RS13630at 2754.524 kb on + strand, within A4249_RS13630at 2754.685 kb on + strandat 2754.685 kb on + strandat 2754.686 kb on - strandat 2754.686 kb on - strandat 2754.686 kb on - strandat 2754.750 kb on + strandat 2754.782 kb on + strandat 2754.782 kb on + strandat 2756.715 kb on + strandat 2756.715 kb on + strandat 2756.715 kb on + strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.856 kb on - strandat 2756.878 kb on - strandat 2756.959 kb on + strandat 2756.989 kb on + strandat 2756.989 kb on + strandat 2756.989 kb on + strandat 2756.989 kb on + strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2757.764 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,753,941 + A4249_RS13625 0.43 -1.7
2,753,941 + A4249_RS13625 0.43 +0.2
2,754,061 + A4249_RS13625 0.62 +0.0
2,754,061 + A4249_RS13625 0.62 +0.1
2,754,062 - A4249_RS13625 0.62 +0.0
2,754,154 + A4249_RS13625 0.77 +0.0
2,754,273 + -1.3
2,754,274 - -0.4
2,754,275 + +0.2
2,754,275 + -1.1
2,754,275 + +0.7
2,754,275 + -0.2
2,754,275 + +0.5
2,754,275 + +0.1
2,754,275 + -0.8
2,754,275 + -0.2
2,754,275 + +0.9
2,754,275 + -0.4
2,754,275 + -0.3
2,754,275 + -0.3
2,754,275 + +0.0
2,754,276 - -0.8
2,754,276 - -0.3
2,754,276 - +0.7
2,754,276 - -0.2
2,754,276 - -0.2
2,754,276 - +0.6
2,754,276 - +0.2
2,754,276 - -0.7
2,754,276 - -1.2
2,754,276 - -0.0
2,754,276 - -0.1
2,754,276 - +0.2
2,754,281 + +0.5
2,754,281 + -0.0
2,754,281 + -1.6
2,754,281 + -0.9
2,754,281 + -0.1
2,754,281 + +0.2
2,754,281 + +0.4
2,754,281 + +0.0
2,754,282 - +0.3
2,754,282 - -1.3
2,754,356 + A4249_RS13630 0.25 -0.1
2,754,356 + A4249_RS13630 0.25 -0.1
2,754,357 - A4249_RS13630 0.25 -0.5
2,754,357 - A4249_RS13630 0.25 -1.0
2,754,357 - A4249_RS13630 0.25 +0.7
2,754,357 - A4249_RS13630 0.25 -0.2
2,754,360 + A4249_RS13630 0.26 -0.1
2,754,360 + A4249_RS13630 0.26 -1.2
2,754,360 + A4249_RS13630 0.26 -0.1
2,754,360 + A4249_RS13630 0.26 +0.5
2,754,360 + A4249_RS13630 0.26 +0.0
2,754,360 + A4249_RS13630 0.26 +0.1
2,754,360 + A4249_RS13630 0.26 +0.0
2,754,360 + A4249_RS13630 0.26 -0.6
2,754,360 + A4249_RS13630 0.26 +0.3
2,754,360 + A4249_RS13630 0.26 +0.0
2,754,360 + A4249_RS13630 0.26 +0.7
2,754,360 + A4249_RS13630 0.26 +1.9
2,754,361 - A4249_RS13630 0.26 +0.1
2,754,361 - A4249_RS13630 0.26 +0.2
2,754,361 - A4249_RS13630 0.26 -0.2
2,754,361 - A4249_RS13630 0.26 +0.1
2,754,361 - A4249_RS13630 0.26 -0.5
2,754,361 - A4249_RS13630 0.26 +0.9
2,754,361 - A4249_RS13630 0.26 +0.1
2,754,470 + A4249_RS13630 0.56 +0.1
2,754,470 + A4249_RS13630 0.56 -0.2
2,754,471 - A4249_RS13630 0.56 +0.7
2,754,524 + A4249_RS13630 0.70 +0.0
2,754,524 + A4249_RS13630 0.70 +0.2
2,754,524 + A4249_RS13630 0.70 +0.5
2,754,524 + A4249_RS13630 0.70 -1.1
2,754,685 + -0.1
2,754,685 + -0.6
2,754,686 - -0.4
2,754,686 - -0.7
2,754,686 - +0.9
2,754,750 + +0.1
2,754,782 + -0.5
2,754,782 + -0.2
2,756,715 + -0.6
2,756,715 + -0.3
2,756,715 + +0.7
2,756,716 - -0.8
2,756,716 - -0.3
2,756,716 - +0.2
2,756,716 - +0.8
2,756,716 - +0.3
2,756,716 - -0.5
2,756,716 - +0.5
2,756,716 - +0.0
2,756,716 - +0.8
2,756,856 - -0.1
2,756,878 - -0.4
2,756,959 + -1.8
2,756,989 + -0.2
2,756,989 + +0.3
2,756,989 + +0.0
2,756,989 + -0.1
2,756,990 - +0.2
2,756,990 - -0.2
2,756,990 - -0.2
2,756,990 - -0.0
2,756,990 - -0.3
2,757,764 + A4249_RS13640 0.63 +0.1
2,757,766 + A4249_RS13640 0.63 +0.9
2,757,766 + A4249_RS13640 0.63 -0.4
2,757,766 + A4249_RS13640 0.63 -0.2
2,757,766 + A4249_RS13640 0.63 +0.4
2,757,766 + A4249_RS13640 0.63 +1.6
2,757,767 - A4249_RS13640 0.63 -0.2
2,757,767 - A4249_RS13640 0.63 -0.5
2,757,767 - A4249_RS13640 0.63 -0.4
2,757,767 - A4249_RS13640 0.63 -0.7

Or see this region's nucleotide sequence