Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13625 and A4249_RS13630 overlap by 38 nucleotides A4249_RS13630 and A4249_RS13635 are separated by 290 nucleotides A4249_RS13635 and A4249_RS13640 are separated by 175 nucleotides
A4249_RS13625: A4249_RS13625 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 2,753,664 to 2,754,302
_RS13625
A4249_RS13630: A4249_RS13630 - hypothetical protein, at 2,754,265 to 2,754,633
_RS13630
A4249_RS13635: A4249_RS13635 - molecular chaperone DnaK, at 2,754,924 to 2,756,831
_RS13635
A4249_RS13640: A4249_RS13640 - molecular chaperone DnaJ, at 2,757,007 to 2,758,209
_RS13640
Position (kb)
2754
2755
2756
2757 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2753.941 kb on + strand, within A4249_RS13625 at 2753.941 kb on + strand, within A4249_RS13625 at 2754.061 kb on + strand, within A4249_RS13625 at 2754.061 kb on + strand, within A4249_RS13625 at 2754.062 kb on - strand, within A4249_RS13625 at 2754.154 kb on + strand, within A4249_RS13625 at 2754.273 kb on + strand at 2754.274 kb on - strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.282 kb on - strand at 2754.282 kb on - strand at 2754.356 kb on + strand, within A4249_RS13630 at 2754.356 kb on + strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.470 kb on + strand, within A4249_RS13630 at 2754.470 kb on + strand, within A4249_RS13630 at 2754.471 kb on - strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.685 kb on + strand at 2754.685 kb on + strand at 2754.686 kb on - strand at 2754.686 kb on - strand at 2754.686 kb on - strand at 2754.750 kb on + strand at 2754.782 kb on + strand at 2754.782 kb on + strand at 2756.715 kb on + strand at 2756.715 kb on + strand at 2756.715 kb on + strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.716 kb on - strand at 2756.856 kb on - strand at 2756.878 kb on - strand at 2756.959 kb on + strand at 2756.989 kb on + strand at 2756.989 kb on + strand at 2756.989 kb on + strand at 2756.989 kb on + strand at 2756.990 kb on - strand at 2756.990 kb on - strand at 2756.990 kb on - strand at 2756.990 kb on - strand at 2756.990 kb on - strand at 2757.764 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,753,941 + A4249_RS13625 0.43 -1.7 2,753,941 + A4249_RS13625 0.43 +0.2 2,754,061 + A4249_RS13625 0.62 +0.0 2,754,061 + A4249_RS13625 0.62 +0.1 2,754,062 - A4249_RS13625 0.62 +0.0 2,754,154 + A4249_RS13625 0.77 +0.0 2,754,273 + -1.3 2,754,274 - -0.4 2,754,275 + +0.2 2,754,275 + -1.1 2,754,275 + +0.7 2,754,275 + -0.2 2,754,275 + +0.5 2,754,275 + +0.1 2,754,275 + -0.8 2,754,275 + -0.2 2,754,275 + +0.9 2,754,275 + -0.4 2,754,275 + -0.3 2,754,275 + -0.3 2,754,275 + +0.0 2,754,276 - -0.8 2,754,276 - -0.3 2,754,276 - +0.7 2,754,276 - -0.2 2,754,276 - -0.2 2,754,276 - +0.6 2,754,276 - +0.2 2,754,276 - -0.7 2,754,276 - -1.2 2,754,276 - -0.0 2,754,276 - -0.1 2,754,276 - +0.2 2,754,281 + +0.5 2,754,281 + -0.0 2,754,281 + -1.6 2,754,281 + -0.9 2,754,281 + -0.1 2,754,281 + +0.2 2,754,281 + +0.4 2,754,281 + +0.0 2,754,282 - +0.3 2,754,282 - -1.3 2,754,356 + A4249_RS13630 0.25 -0.1 2,754,356 + A4249_RS13630 0.25 -0.1 2,754,357 - A4249_RS13630 0.25 -0.5 2,754,357 - A4249_RS13630 0.25 -1.0 2,754,357 - A4249_RS13630 0.25 +0.7 2,754,357 - A4249_RS13630 0.25 -0.2 2,754,360 + A4249_RS13630 0.26 -0.1 2,754,360 + A4249_RS13630 0.26 -1.2 2,754,360 + A4249_RS13630 0.26 -0.1 2,754,360 + A4249_RS13630 0.26 +0.5 2,754,360 + A4249_RS13630 0.26 +0.0 2,754,360 + A4249_RS13630 0.26 +0.1 2,754,360 + A4249_RS13630 0.26 +0.0 2,754,360 + A4249_RS13630 0.26 -0.6 2,754,360 + A4249_RS13630 0.26 +0.3 2,754,360 + A4249_RS13630 0.26 +0.0 2,754,360 + A4249_RS13630 0.26 +0.7 2,754,360 + A4249_RS13630 0.26 +1.9 2,754,361 - A4249_RS13630 0.26 +0.1 2,754,361 - A4249_RS13630 0.26 +0.2 2,754,361 - A4249_RS13630 0.26 -0.2 2,754,361 - A4249_RS13630 0.26 +0.1 2,754,361 - A4249_RS13630 0.26 -0.5 2,754,361 - A4249_RS13630 0.26 +0.9 2,754,361 - A4249_RS13630 0.26 +0.1 2,754,470 + A4249_RS13630 0.56 +0.1 2,754,470 + A4249_RS13630 0.56 -0.2 2,754,471 - A4249_RS13630 0.56 +0.7 2,754,524 + A4249_RS13630 0.70 +0.0 2,754,524 + A4249_RS13630 0.70 +0.2 2,754,524 + A4249_RS13630 0.70 +0.5 2,754,524 + A4249_RS13630 0.70 -1.1 2,754,685 + -0.1 2,754,685 + -0.6 2,754,686 - -0.4 2,754,686 - -0.7 2,754,686 - +0.9 2,754,750 + +0.1 2,754,782 + -0.5 2,754,782 + -0.2 2,756,715 + -0.6 2,756,715 + -0.3 2,756,715 + +0.7 2,756,716 - -0.8 2,756,716 - -0.3 2,756,716 - +0.2 2,756,716 - +0.8 2,756,716 - +0.3 2,756,716 - -0.5 2,756,716 - +0.5 2,756,716 - +0.0 2,756,716 - +0.8 2,756,856 - -0.1 2,756,878 - -0.4 2,756,959 + -1.8 2,756,989 + -0.2 2,756,989 + +0.3 2,756,989 + +0.0 2,756,989 + -0.1 2,756,990 - +0.2 2,756,990 - -0.2 2,756,990 - -0.2 2,756,990 - -0.0 2,756,990 - -0.3 2,757,764 + A4249_RS13640 0.63 +0.1 2,757,766 + A4249_RS13640 0.63 +0.9 2,757,766 + A4249_RS13640 0.63 -0.4 2,757,766 + A4249_RS13640 0.63 -0.2 2,757,766 + A4249_RS13640 0.63 +0.4 2,757,766 + A4249_RS13640 0.63 +1.6 2,757,767 - A4249_RS13640 0.63 -0.2 2,757,767 - A4249_RS13640 0.63 -0.5 2,757,767 - A4249_RS13640 0.63 -0.4 2,757,767 - A4249_RS13640 0.63 -0.7
Or see this region's nucleotide sequence