Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13170 and A4249_RS13175 are separated by 168 nucleotides A4249_RS13175 and A4249_RS13180 are separated by 7 nucleotides A4249_RS13180 and A4249_RS13185 are separated by 0 nucleotides
A4249_RS13170: A4249_RS13170 - potassium transporter Kup, at 2,651,928 to 2,653,904
_RS13170
A4249_RS13175: A4249_RS13175 - Rrf2 family transcriptional regulator, at 2,654,073 to 2,654,543
_RS13175
A4249_RS13180: A4249_RS13180 - SDR family oxidoreductase, at 2,654,551 to 2,655,348
_RS13180
A4249_RS13185: A4249_RS13185 - dihydrolipoyl dehydrogenase, at 2,655,349 to 2,656,746
_RS13185
Position (kb)
2654
2655
2656 Strain fitness (log2 ratio)
-1
0
1
2 at 2653.908 kb on + strand at 2653.908 kb on + strand at 2653.909 kb on - strand at 2653.959 kb on + strand at 2653.960 kb on - strand at 2654.050 kb on - strand at 2654.050 kb on - strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.120 kb on + strand, within A4249_RS13175 at 2654.121 kb on - strand, within A4249_RS13175 at 2654.121 kb on - strand, within A4249_RS13175 at 2654.393 kb on + strand, within A4249_RS13175 at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2655.008 kb on - strand, within A4249_RS13180 at 2655.208 kb on + strand, within A4249_RS13180 at 2655.209 kb on - strand, within A4249_RS13180 at 2655.209 kb on - strand, within A4249_RS13180 at 2655.786 kb on + strand, within A4249_RS13185 at 2655.786 kb on + strand, within A4249_RS13185 at 2655.787 kb on - strand, within A4249_RS13185 at 2656.005 kb on + strand, within A4249_RS13185 at 2656.005 kb on + strand, within A4249_RS13185 at 2656.100 kb on + strand, within A4249_RS13185 at 2656.113 kb on + strand, within A4249_RS13185 at 2656.113 kb on + strand, within A4249_RS13185 at 2656.114 kb on - strand, within A4249_RS13185 at 2656.188 kb on - strand, within A4249_RS13185 at 2656.188 kb on - strand, within A4249_RS13185
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,653,908 + +0.1 2,653,908 + -0.3 2,653,909 - -0.6 2,653,959 + -0.1 2,653,960 - +0.4 2,654,050 - -0.5 2,654,050 - +0.0 2,654,118 + +0.2 2,654,118 + -0.6 2,654,118 + +0.1 2,654,118 + +2.3 2,654,118 + -0.2 2,654,118 + +0.1 2,654,118 + +0.4 2,654,118 + -0.8 2,654,119 - -0.0 2,654,119 - +1.1 2,654,119 - +0.1 2,654,119 - -0.1 2,654,119 - +0.5 2,654,119 - -0.1 2,654,119 - +0.1 2,654,119 - -0.6 2,654,119 - +0.1 2,654,119 - -1.4 2,654,119 - -1.5 2,654,119 - +0.3 2,654,119 - -0.9 2,654,120 + A4249_RS13175 0.10 +0.4 2,654,121 - A4249_RS13175 0.10 +0.1 2,654,121 - A4249_RS13175 0.10 -0.7 2,654,393 + A4249_RS13175 0.68 -0.1 2,654,610 + +0.6 2,654,610 + +0.1 2,654,610 + -0.1 2,654,610 + +0.0 2,654,611 - +0.6 2,654,611 - -0.4 2,654,611 - -0.3 2,654,611 - +0.6 2,654,611 - +0.5 2,654,611 - -0.2 2,654,611 - +0.5 2,654,611 - +0.1 2,654,611 - -0.6 2,654,614 + -0.2 2,654,614 + -0.3 2,654,614 + +0.7 2,654,614 + -0.1 2,654,614 + +0.5 2,654,615 - +0.1 2,654,615 - +0.2 2,654,615 - +1.2 2,654,615 - +0.2 2,654,615 - +0.3 2,654,615 - +0.7 2,654,615 - +0.1 2,655,008 - A4249_RS13180 0.57 -1.2 2,655,208 + A4249_RS13180 0.82 +0.1 2,655,209 - A4249_RS13180 0.82 +0.1 2,655,209 - A4249_RS13180 0.82 -0.7 2,655,786 + A4249_RS13185 0.31 -0.2 2,655,786 + A4249_RS13185 0.31 +0.3 2,655,787 - A4249_RS13185 0.31 +0.1 2,656,005 + A4249_RS13185 0.47 -0.8 2,656,005 + A4249_RS13185 0.47 +0.9 2,656,100 + A4249_RS13185 0.54 -0.9 2,656,113 + A4249_RS13185 0.55 +0.5 2,656,113 + A4249_RS13185 0.55 -0.2 2,656,114 - A4249_RS13185 0.55 -1.4 2,656,188 - A4249_RS13185 0.60 -0.9 2,656,188 - A4249_RS13185 0.60 +0.1
Or see this region's nucleotide sequence